XLOC_023709 (gene) - C. hemisphaerica

Overview
NameXLOC_023709
Unique NameXLOC_023709
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002078:3357..10050-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023709 ID=XLOC_023709|Name=XLOC_023709|organism=Clytia hemisphaerica|type=gene|length=6694bp|location=Sequence derived from alignment at sc0002078:3357..10050- (Clytia hemisphaerica)
NGATGATAAGAGTTGTTGTATCTCTCAACCATGTCCTGTAAGACGTCAAT ATAACGATAAGTATTATACTTTGTAAAGTATTTGAACATCAAATTTTTAA AGGTGCGATTAAATCTCTCTACAGTGCTGGCTTTTCTTTCACTATGCGTG AAAAACAACTTGATGTCACCGTGTTCTTTCAGTAGTCGTTTCACGTGGGT ATTTAAAAACTCTGTACCTTGATCGGTGTGAATGAGTTTGGGTTTGCGTT GTTGAAACATTCTTTCCATAACAACATTCAGCTCTTTTCCAGTTTTTGTT TTTAGAGGCTGAACGAAAGCGAATTTACTCAAAACATCTATACACATGAG AAGGTATTTGAAACCTGAGTTGTACCTAGACAACTTGGTTAAATCTACCA AATCCATTTGCCAATGCTCATCAATGTCGTAAACGACAACCGGTCTCGTC GCGAATCGAAGTCTACTCACAGGTCTGTGAATAGTATAAGTCAATTGTGA GCTCAACCATCTCTTAACTTTGGATCTTGATATCGTAGCACTATTCTTAC GAGCCTCTCTATACAATTTCTCCAGTCCGGAAAAAGAAGCTGGAGAAGCG AGAGAATAATACAGTTTATAAAGTATTCGATCATCATCATCAGTACTTTG ATTATGAACGAAGTCACTACCGCGATCATTGCTTTCACTATTGATTGTTG ACTGCTTTCTTTTTCGGCTTGCCATCAATTTGAGAATTTTCAATAGTTAT ACCAGAACCGCAACAAGCTATCATGCATCGAAATCTTTTGAAAAAATCTC GAAGTCTTAAAGCGAGAGGCGTACTACACATGATGTCGATGATGCGATCT CATCTCAAGCACACTTACGAAACCAAATGAACAAAAAGTCTGATAGATTT TCTTTTATATTATATTTTCTTNTCATGACGTAACTTTATTACTGAAGGAG AAAATGGATTTTCATTGCGTAGACCTTTGTAGGTCTGCAAAAGCCTTTTT TGCTCCTTATTTTTAATCCAAGTATCCGCTACATTTGCATCTGACAATGC CTTTGTAAAAACAGACTGTGCCATTATGGGAATGGATAAACTCTCTCTAT TCGTAACAGAGTTAGTCAGCAGGTCTGTAAAGTTTGTGTTTGGTATACGC GAATTTTTAAAGTAAACGTCACCGTTTGCTTCCCATCGTATAATATCAGG GTGTTTTTTCAACTGTTCTATAATCAACCGTGCGTTTGTCTTACTCGTTT TGGGTAGACCTTTGAGAATATTGGTCTCTATAATATTCAATTCGTCGAGT GCTGTAGACGGCGATGATGATGATGTTTGAGGATTCAGACTGTTGCTGTT GTTGTTCTTGTTTAAAACAATCTCAACAGGTTTTGGTTTTGTTAGAGACT CGTATCTAGATTGAAGATTGTTCAACTGTTCGGTGAAATTTCGAATTTTT TCATCGGTTGACATGTTGTACTTGTCCCATACATCTTTCATTTTGGCTTC GGCTTTGAATAACTCTACCTTTTCTGGATTTAAAATTTCAGTGGCATTGG TAGTTAATCGCGAATCACTATGATCACCACTATCCAAAACGCTATTATGA TGGTTTTGGTTCTTGTTGTTAGCATCTTTGAGTATGTTGTATTCCTTTTC AGTAATGACAACGTATTTGTTTCCAAATGGGATCATCCCAGGAATATCTT TGGTAGTATTGACGATACCAGTTCGCTACCTACGGTGGTAAGTAGAATAG GTAGTAAAGCAGATCCGCCTTGCTGGATGAGCAGTTTCTTGCGGTCTTTA GTCTTTGTTTTCTTGTCCGCGAGCTTTCTGAGTAGGGTCTTTTTAGGAAG AAGCTTTTTCTTTTGTGAGTGAGTGATTTCGATATTACCCAAAAGTATAT TTTTGATGCAGTCACAAATGGCGTTGATTTGCTCACTTTTTGCACCTGTC AGCAAGCGAATTCGATCCTGCTTTGATGAACACTGCAACAATTTCAAATA ATCACTGTTTTTCAGCACTCTTCTTGTCATAATTACTCTACATCTGTGAG TTGTCAACAGTCTACCAAACAACGATGAGAATGACTTGACTTGTGAACTG TCAAGACAAAAATGCGAGATATTGATTTGAGTGTATTCATTTTATATACC TTTTGGAATATACATAATCTGTGGATGTTCATGAGGGAAAATATTACTGC TGACTCTGAAACGATCATCTCTTGTTGGTGTGACGTCTAAGAAAAGGTAT GAGAAGGGTTTCTTTGTCGCATCGCGATATGCCCAAACAAAAAACTTTGT ATTACCTGGCATAACTTGTCTCGCTAAATTGACAATCTGAGAAGCATCTC TAGGGTTCTTAAACACCACGATATAGTCAGAGTTTAAACTAATATTTCTT TGATTTTTATGAAAGAGATTTTGGGTGAGATAAATAACCGAAAGGTTATC GTGTCTTCCACGTGTGAAAAGCTGAGAAATTCTTTCGTCCTTGCTAGCCT CGTCCATCATGTCATCCAAAATGATCAAATTCATGATGTTTCGATCGAAT GTGCTTTCCAGGTCATGTGGAATACCATCTACGTACTCGATATTTTTATC AATGTTCATGAGTTCTTCGAGTAGGTCAGGTTGGTGTTTCGCATACACCC ACATGATGCGTTTTGGCATTGCTGGTTTAATCAGATTTTTACCATGCTGA AGAATGTGTTTCGTGAATACGGTCTTACCGGATTTTCTGCTTCCAGCAAC AATCATACTAAACGGATGACTTAGCTCCATTTTGAACTGGATTGAAATGA ATTCTTTTCAATGCTTTGATTCATTTTAACCGTTTTCGAGATCATAAATG AACAAATCATACTGATCATTTATATAGTTACTTTCAAATTTTCATTTGAA CAAACAATAAAATACCATGGTTGAATATAATTCACTATTCATCTTATTCA AAATAGTTTGTTTATTATTCAATTTCTTTTCAGAGGAAAGTATAACTTAG GGTTTGATGTGATCTTGAACATTTTGTTTAATTTTTTGAAGAGACTGGTA GCAGCAGCAGTAGAGTGACGTATTTGAGCTTGCATCTTTGCATACCTTAT ACTTTGTTTTTGAGACATAATATGTCTTCATCATCAGATTCTCTTGATGA CTTGATAACTATTTTGTTGGAGGATATTGAGATACCTGAAGAAGCAGTGG TCTCNTACTTCGTTTTTGAGACATAATATGTCTTCATCATCAGATTCTCT TGATGACTTGATAACTATTTTGTTGGAGGATATTGAGATACCTGAAGAAG CAGTGGTCTCCGAAGAACAACTATCTTTATCTGGTCGAGAAAATAATGTT GAAATAATTCCGAATTTTAGTGTCATGAATATGATGGATTTTCTAAGCAA TATGGAAGTAGAAGAACTATATGATTTTAATGATGATGATGATGATAATG TTGCTGATGATGAAATTGATTTCCATATAAAAGATGCATCTGATATCAAC GCGTGTTGTACTACTCTGGTATGTAAGAAATGTAAATATCCGTGTTTCTC CGAAGATCATTTGAAAAGACACAAGAAAAATTGCAATAGACTGGATACAG ATAAAGAGTTTTCTTGTATGTCTTGTTTTCGTCGTTTTACCATGAAGAAA AATTGTAAACTTCATGAAAATACTTGTCGGAAGCGATTGCGCACTGATGA TATTGTTGCTCCAACTTCATCAAAAAAAGCCAATACGCATCAACTAACAC CAGCGCCATCATCATCACACAGAAATATTTTAGTTCAAGATGGTGGAAGT ACTTCGAATTATGGTGAAATTCATGCCGAATATTGGGAAATTCCGACTGT ATATGAGAGTGCATTCAATGGAAAGATTGTAACTTATAAAAAGAAGTTTG ATCAATCCGTACAAGCTAACTTTTCTGAGCGTTTGAAAAACGTTTANATT CAATGGAAAGATTGTAACATATAAAAAGAAGTTTGATCAATCTGTACAAG CTAACTTTTCTGAACGTTTGAAAAACGTTTGCAACTTTCACAAGGCAGAG CTCGAGAGAAAACTCGCCGAATCTCGAACTAAAGCTTGGAAATACTATTT TTCAGTTGTAGCAACTTTTCACAAGCTCAACCAAACTGATGTTTTAACCG AACCGCCAGCCGTTTTTCGCTCTGAAGTCTTTACAATTAATAATGACAAT TTAGATGACATTTCACGACACATTGAAATAGCACATCAACAATTATGGCA TGAAATTGAAGAATTTCAACGAAATGGTAGTGGCTGGGTGATCGATTGTC TTATTTCCCTTGATATGAGTAAGTTTCTTTTATTTGTTTTCTTACATATT TTTTTTTTTTGCCTCTTATACTCTGATCACTTTAAAAAATTTTTTTTTTT TTTTCAGGTTTGATTGCTTATGATCCTTTACGCGCGTCATCTTATCTACC TCTACCGAAGGGACTCAAGTCCAAGAAATGTTTTGTCAACGTCAAGAACA CTTTTGATGATAAATGTTTTCTATGGAGTATTTTGGCGCATCTTTATAAT TTTCCGAATAATCGAAGTCGTGTTCAAAAGTATCAATATCAAGATTATGA ACAAGATTTCGATTTGGATATATGAACAATATTTCATTTCCGACACCTGT TAAGCAACTTGATCGATTTGAAAGACAAAACCCTAAGGTGGCTATTAATG TGTTTGGATGGGATGAGGAAGAGGAAAAGATTTACTTTCGAAGATCAACC AAATCTTTAGGTCATATTCAGATTAATTTGCTCCTTTTTTCAAGTAATGA ACANGAGGAAGAGGAAAAGATTTACTTTCGAAGATCAACCAAATCTTTAG GTCATATTCAGATTAATTTGCTCCTTTTTTCAAGTAATGAACAATCGCAC TATGTACTTATTACTAATGTTAGTTCAATGCTAACTCGTCAACTTTCTCA TCATCGTGGAAAGAAGCATTTTTGTTTTCATTGTATGCATGGTTTCCGAA ATGAAAATATATTGATCCGTCATTCAAAACTATGTCATACACATCAACCT CAGCATGCTGAACTGCCGAAAGAAGACAATAATGTTTTACGATTTACCAA AACTGAATATCAACTACCTTGTCCTTTTGTCATTTATTGTGATTTTGAAA GTATGTTGGTACCAACATCTACTGGTGATTATTATATTCCAACTAAAAAC CATCCGGGTGTAGAACGACACGAAGAAGATGAGGAAGCAAGTGCGAGATT AAAGACTTCATGGACAAATAAATATCAGGAACAGCGTGCTTGTAGTTTTG CGTATCACATTGTCAGTACTGATAAACGGTACTATTCAGATCCTAAACTT TATTTCGGAGAAAATGCTGCTGAAATCTTTATTGATATGCTTTTGCGAGA GGAGAAGATACTCCGCAAGTGGTTATTTCGTCAGACACCTATGCATCCCT TAACACGCGAGGAAAAGAATTATTTTTATTCAAATAACCCGAAATGTCAC ATTTGTGATGATCCGATTACGTTTGGTTGGAAAGTCAAAGATCATAACCA TCTTGATGGCACTTACAATGGTATGTATCATTGCTATTATCTGGTAATAC CCAGACGATTTTTTATTTTCGTTTCCATACGACTCTTTCACACTCTCATG AAGCTTTATAAGAAATTAATTTCTCTTTCGTTTTAAGGTCCTGCTCATCA AGGTTGTAACCTGAACTATCGAATTCATACTGAGCAAATGAAGATACCAG TGGTTTTTCACAATTTAAAAACGTNAATTCATACTGAGCAAATGAAGATA CCAGTGGTTTTTCACAATTTAAAAACGTATGATGCACATTTAATAATGTC GGCTGTAAAACAAAGATATGGAGAAATAACTGTCATTCCGACGAACACTG AAAAGTATATTTCTTTTTCCATTGGTGGTTTACGTTTCATTGACAGTTTT CAGTTCCTGTTTTCGTCTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCAGGGTATGATGACACGC AGCCGACGAGACATTTAATGTATTGGGATGCCAACAATCTTTATGGATGG GCTATGTCTCAGTATCTACCAATTGGTATGGTTTAATTCGTTTGTTATTT TTAAAGTTGTTCTTTTATGTATGATCATGATTATAATATTATTTTTTGAA ATTTGATTCTTGTTTTCTAAAGGTGATTTTACATGGATGACAGCTGATGA AATTTCTGCTCTCAATGTTGATGACGCTAAGGATGATGATGACATTGGTT ACATTATGGAAGTTGATCTAGGTATGTTAACATGATATCAATCATTTCAT GATANGGTGATTTTACATGGATGACAGCTGATGAAATTTCTGCTCTCAAC GTTGATGACGCTAAGGATGATGATGACATTGGTTACATTTTGGAAGTTGA TCTAGGTATGTTGACATGATATCAATCATTTCATGACATCTAATGCTATT GTTATTATTGTTGTTGATCTTTCTATATCTTTTTTCATTATAGAATACCC TCAAGAATTACACGACTCGCATTCTGATTACCCTTTGGCACCGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039338TCONS_00039338Clytia hemisphaericatranscript
TCONS_00039337TCONS_00039337Clytia hemisphaericatranscript
TCONS_00039336TCONS_00039336Clytia hemisphaericatranscript
TCONS_00039335TCONS_00039335Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039337-proteinTCONS_00039337-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002078supercontigsc0002078:3357..10050 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.08 0.04 0.08 0.05 1.42 0.15 1.76 3.24 1.03 0.55 0.41 1.29 11.76 13.47 0.92 2.45 0.11 0.2 0.36 0.15 0.18 1.62 0.01 0.04 2.21 5.82 0.17 0.07 1.59 1.56