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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039337 ID=TCONS_00039337|Name=TCONS_00039337|organism=Clytia hemisphaerica|type=transcript|length=5631bp
NGATGATAAGAGTTGTTGTATCTCTCAACCATGTCCTGTAAGACGTCAAT
ATAACGATAAGTATTATACTTTGTAAAGTATTTgaacatcaaatttttaa
agGTGCGATTAAATCTCTCTACAGTGCTGGCTTTTCTTTCACTATGCGTG
AAAAACAACTTGATGTCACCGTGTTCTTTCAGTAGTCGTTTCACGTGGGT
ATTTAAAAACTCTGTACCTTGATCGGTGTGAATGAGTTTGGGTTTGCGTT
GTTGAAACATTCTTTCCATAACAACATTCAGCTCTTTTccagtttttgtt
tttagaggCTGAACGAAAGCGAATTTACTCAAAACATCTATACACATGAG
AAGGTATTTGAAACCTGAGTTGTACCTAGACAACTTGGTTAAATCTACCA
AATCCATTTGCCAATGCTCATCAATGTCGTAAACGACAACCGGTCTCGTC
GCGAATCGAAGTCTACTCACAGGTCTGTGAATAGTATAAGTCAATTGTGA
GCTCAACCATCTCTTAACTTTGGATCTTGATATCGTAGCACTATTCTTAC
GAGCCTCTCTATACAATTTCTCCAGTCCGGAAAAAGAAGCTGGAGAAGCG
AGAGAATAATACAGTTTATAAAGTATTCGATCATCATCATCAGTACTTTG
ATTATGAACGAAGTCACTACCGCGATCATTGCTTTCACTATTGATTGTTG
ACTGCTTTCTTTTTCGGCTTGCCAtcaatttgagaattttcaatAGTTAT
ACCAGAACCGCAACAAGCTATCATGCAtcgaaatcttttgaaaaaatctc
gAAGTCTTAAAGCGAGAGGCGTACTACACATGATGTCGATGATGCGATCT
CATCTCAAGCACACTTACGAAACCAAATGAACAAAAAGTCTGatagattt
tcttttatattatattttcttNTCATGACGTAACTTTATTACTGAAGGAG
AAAATGGATTTTCATTGCGTAGACCTTTGTAGGTCTGCAAAAGCCTTTTT
TGCTCCTTATTTTTAATCCAAGTATCCGCTACATTTGCATCTGACAATGC
CTTTGTAAAAACAGACTGTGCCATTATGGGAATGGATAAACTCTCTCTAT
TCGTAACAGAGTTAGTCAGCAGGTCTGTAAAGTTTGTGTTTGGTATACGC
GAATTTTTAAAGTAAACGTCACCGTTTGCTTCCCATCGTATAATATCAGG
GTGTTTTTTCAACTGTTCTATAATCAACCGTGCGTTTGTCTTACTCGTTT
TGGGTAGACCTTTGAGAATATTGGTCTCTATAATATTCAATTCGTCGAGT
GCTGTAGACGgcgatgatgatgatgtttgaGGATTCAGactgttgctgtt
gttgttctTGTTTAAAACAATCTCAACAGGTTTTGGTTTTGTTAGAGACT
CGTATCTAGATTGAAGATTGTTCAACTGTTCggtgaaatttcgaattttt
tcatcGGTTGACATGTTGTACTTGTCCCATACATCTTTCATTTTGGCTTC
GGCTTTGAATAACTCTACCTTTTCTGGATTTAAAATTTCAGTGGCATTGG
TAGTTAATCGCGAATCACTATGATCACCACTATCCAAAACGCTATTATGA
TGGTTTTGGTTCTTGTTGTTAGCATCTTTGAGTATGTTGTAttccttttc
agtaatgacaaCGTATTTGTTTCCAAATGGGATCATCCCAGGAATATCTT
TGGTAGTATTGACGATACCAGTTCGCTACCTACGGTGGTAAGTAGAATAG
GTAGTAAAGCAGATCCGCCTTGCTGGATGAGCAGTTTCTTGCGGTCTTTa
gtctttgttttcttgtccGCGAGCTTTCTGAGTAGGGTCTTTTTAGGAAG
AAGCTTTTTCTTTTGTGAGTGAGTGATTTCGATATTACCCAAAAGTATAT
TTTTGATGCAGTCACAAATGGCGTTGATTTGCTCACTTTTTGCACCTGTC
AGCAAGCGAATTCGATCCTGCTTTGATGAACACTGCAACAATTTCAAATA
ATCACTGTTTTTCAGCACTCTTCTTGTCATAATTACTCTACATCTGTGAG
TTGTCAACAGTCTACCAAACAACGATGAGAATGACTTGACTTGTGAACTG
TCAAGACAAAAATGCGAGATATTGATTTGAGTGTATTCATTTTATATACC
TTTTGGAATATACATAATCTGTGGATGTTCATGAGGGAAAATATTACTGC
TGACTCTGAAACGATCATCTCTTGTTGGTGTGACGTCTAAGAAAAGGTAT
GAGAAGGGTTTCTTTGTCGCATCGCGATATGCCCAAACAAAAAACTTTGT
ATTACCTGGCATAACTTGTCTCGCTAAATTGACAATCTGAGAAGCATCTC
TAGGGTTCTTAAACACCACGATATAGTCAGAGTTTAAACtaatatttctt
tgatttttatgaaagaGATTTTGGGTGAGATAAATAACCGAAAGGTTATC
GTGTCTTCCACGTGTGAAAAGCTGAGAAATTCTTTCGTCCTTGCTAGCCT
CGTCCATCATGTCAtccaaaatgatcaaattcaTGATGTTTCGATCGAAT
GTGCTTTCCAGGTCATGTGGAATACCATCTACGTactcgatatttttatc
aatgttCATGAGTTCTTCGAGTAGGTCAGGTTGGTGTTTCGCATACACCC
ACATGATGCGTTTTGGCATTGCTGGTTTAATCAGATTTTTACCATGCTGA
AGAATGTGTTTCGTGAATACGGTCTTACCGGATTTTCTGCTTCCAGCAAC
AATCATACTAAACGGATGACTTAGCTCCATTTTGAACTGGATTGAAATGA
ATTCTTTTCAATGCTTTGATTCATTTTAACCGTTTTCGAGATCATAAATG
AACAAATCATACTGATCATTTATATAgttactttcaaattttcatttgaa
caaACAATAAAATACCATGGTTGAATATAATTCACTATTCATCTTATTCA
AAATAGTTTGTTTAttattcaatttcttttcagaGGAAAGTATAACTTAG
GGTTTGATGTGATCTTGAacattttgtttaattttttgaagaGACTGGTA
GCAGCAGCAGTAGAGTGACGTATTTGAGCTTGCATCTTTGCATACCTTAT
ACTTTGTTTTTGAGACATAATATGTCTTCATCATCAGATTCTCTTGATGA
CTTGATAACTATTTTGTTGGAGGATATTGAGATACCTGAAGAAGCAGTGG
TCTCNTACTTCGTTTTTGAGACATAATATGTCTTCATCATCAGATTCTCT
TGATGACTTGATAACTATTTTGTTGGAGGATATTGAGATACCTGAAGAAG
CAGTGGTCTCCGAAGAACAACTATCTTTATCTGGTCGAGAAAATAATGTT
GAAATAATTCCGAATTTTAGTGTCATGAATATGATGGATTTTCTAAGCAA
TATGGAAGTAGAAGAACTATATGATtttaatgatgatgatgatgataatg
ttGCTGATGATGAAATTGATTTCCATATAAAAGATGCATCTGATATCAAC
GCGTGTTGTACTACTCTGGTATGTAAGAAATGTAAATATCCGTGTTTCTC
CGAAGATCATTTGAAAAGACACaagaaaaattgcaatagaCTGGATACAG
ATAAAGAGTTTTCTTGTATGTCTTGTTTTCGTCGTTTTACCATGAAGAAA
AATTGTAAACTTCATGAAAATACTTGTCGGAAGCGATTGCGCACTGATGA
TATTGTTGCTCCAACTTCATCAAAAAAAGCCAATACGCATCAACTAACAC
CAGCGCCATCATCATCACACAGAAATATTTTAGTTCAAGATGGTGGAAGT
ACTTCGAATTATGGTGAAATTCATGCCGAATATTGGGAAATTCCGACTGT
ATATGAGAGTGCATTCAATGGAAAGATTGTAACTTATAAAAAGAAGTTTG
ATCAATCCGTACAAGCTAACTTTTCTGAGCGTTTGAAAAACGTTTANATT
CAATGGAAAGATTGTAACATATAAAAAGAAGTTTGATCAATCTGTACAAG
CTAACTTTTCTGAACGTTTGAAAAACGTTTGCAACTTTCACAAGGCAGAG
CTCGAGAGAAAACTCGCCGAATCTCGAACTAAAGCTTGGAAATACTATTT
TTCAGTTGTAGCAACTTTTCACAAGCTCAACCAAACTGATGTTTTAACCG
AACCGCCAGCCGTTTTTCGCTCTGAAGTCTTTACAATTAATAATGACAAT
TTAGATGACATTTCACGACACATTGAAATAGCACATCAACAATTATGGCA
TGAAATTGAAGAATTTCAACGAAATGGTAGTGGCTGGGTGATCGATTGTC
TTATTTCCCTTGATATGAgtttgaTTGCTTATGATCCTTTACGCGCGTCA
TCTTATCTACCTCTACCGAAGGGACTCAAGTCCAAGAAATGTTTTGTCAA
CGTCAAGAACACTTTTGATGATAAATGTTTTCTATGGAGTATTTTGGCGC
ATCTTTATAATTTTCCGAATAATCGAAGTCGTGTTCAAAAGTATCAATAT
CAAGATTATGAACAAGATTTCGATTTGGATATATGAACAATATTTCATTT
CCGACACCTGTTAAGCAACTTGATCGATTTGAAAGACAAAACCCTAAGGT
GGCTATTAATGTGTTTGGATGGGATGAGGAAGAGGAAAAGATTTACTTTC
GAAGATCAACCAAATCTTTAGGTCATATTCAGATTAATTTGCTCCTTTTT
TCAAGTAATGAACANGAGGAAGAGGAAAAGATTTACTTTCGAAGATCAAC
CAAATCTTTAGGTCATATTCAGATTAATTTGCTCCTTTTTTCAAGTAATG
AACAATCGCACTATGTACTTATTACTAATGTTAGTTCAATGCTAACTCGT
CAACTTTCTCATCATCGTGGAAAgaagcatttttgttttcattgtatGCA
TGGTTTCcgaaatgaaaatatattgaTCCGTCATTCAAAACTATGTCATA
CACATCAACCTCAGCATGCTGAACTGCCGAAAGAAGACAATAATGTTTTA
CGATTTACCAAAACTGAATATCAACTACCTTGTCCTTTTGTCATTTATTG
TGATTTTGAAAGTATGTTGGTACCAACATCTACTGGTGATTATTATATTC
CAACTAAAAACCATCCGGGTGTAGAACGACACGAAGAAGATGAGGAAGCA
AGTGCGAGATTAAAGACTTCATGGACAAATAAATATCAGGAACAGCGTGC
TTGTAGTTTTGCGTATCACATTGTCAGTACTGATAAACGGTACTATTCAG
ATCCTAAACTTTATTTCGGAGAAAATGCTGCTGAAATCTTTATTGATATG
CTTTTGCGAGAGGAGAAGATACTCCGCAAGTGGTTATTTCGTCAGACACC
TATGCATCCCTTAACACGCGAggaaaagaattatttttattcaaataacC
CGAAATGTCACATTTGTGATGATCCGATTACGTTTGGTTGGAAAGTCAAA
GATCATAACCATCTTGATGGCACTTACAATGGTGATTTTACATGGATGAC
AGCTGATGAAATTTCTGCTCTCAACGTTGATGACGCTAAGGATGATGATG
ACATTGGTTACATTTTGGAAGTTGATCTAGAATACCCTCAAGAATTACAC
GACTCGCATTCTGATTACCCTTTGGCACCGG Run BLAST on NCBI protein sequence of TCONS_00039337-protein >TCONS_00039337-protein ID=TCONS_00039337-protein|Name=TCONS_00039337-protein|organism=Clytia hemisphaerica|type=polypeptide|length=366bp
MNNISFPTPVKQLDRFERQNPKVAINVFGWDEEEEKIYFRRSTKSLGHIQ
INLLLFSSNEXEEEEKIYFRRSTKSLGHIQINLLLFSSNEQSHYVLITNV
SSMLTRQLSHHRGKKHFCFHCMHGFRNENILIRHSKLCHTHQPQHAELPK
EDNNVLRFTKTEYQLPCPFVIYCDFESMLVPTSTGDYYIPTKNHPGVERH
EEDEEASARLKTSWTNKYQEQRACSFAYHIVSTDKRYYSDPKLYFGENAA
EIFIDMLLREEKILRKWLFRQTPMHPLTREEKNYFYSNNPKCHICDDPIT
FGWKVKDHNHLDGTYNGDFTWMTADEISALNVDDAKDDDDIGYILEVDLE
YPQELHDSHSDYPLAP Run BLAST on NCBI transcript from alignment at sc0002078:3357..10050- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039337 ID=TCONS_00039337|Name=TCONS_00039337|organism=Clytia hemisphaerica|type=transcript|length=6694bp|location=Sequence derived from alignment at sc0002078:3357..10050- (Clytia hemisphaerica)
NGATGATAAGAGTTGTTGTATCTCTCAACCATGTCCTGTAAGACGTCAAT
ATAACGATAAGTATTATACTTTGTAAAGTATTTGAACATCAAATTTTTAA
AGGTGCGATTAAATCTCTCTACAGTGCTGGCTTTTCTTTCACTATGCGTG
AAAAACAACTTGATGTCACCGTGTTCTTTCAGTAGTCGTTTCACGTGGGT
ATTTAAAAACTCTGTACCTTGATCGGTGTGAATGAGTTTGGGTTTGCGTT
GTTGAAACATTCTTTCCATAACAACATTCAGCTCTTTTCCAGTTTTTGTT
TTTAGAGGCTGAACGAAAGCGAATTTACTCAAAACATCTATACACATGAG
AAGGTATTTGAAACCTGAGTTGTACCTAGACAACTTGGTTAAATCTACCA
AATCCATTTGCCAATGCTCATCAATGTCGTAAACGACAACCGGTCTCGTC
GCGAATCGAAGTCTACTCACAGGTCTGTGAATAGTATAAGTCAATTGTGA
GCTCAACCATCTCTTAACTTTGGATCTTGATATCGTAGCACTATTCTTAC
GAGCCTCTCTATACAATTTCTCCAGTCCGGAAAAAGAAGCTGGAGAAGCG
AGAGAATAATACAGTTTATAAAGTATTCGATCATCATCATCAGTACTTTG
ATTATGAACGAAGTCACTACCGCGATCATTGCTTTCACTATTGATTGTTG
ACTGCTTTCTTTTTCGGCTTGCCATCAATTTGAGAATTTTCAATAGTTAT
ACCAGAACCGCAACAAGCTATCATGCATCGAAATCTTTTGAAAAAATCTC
GAAGTCTTAAAGCGAGAGGCGTACTACACATGATGTCGATGATGCGATCT
CATCTCAAGCACACTTACGAAACCAAATGAACAAAAAGTCTGATAGATTT
TCTTTTATATTATATTTTCTTNTCATGACGTAACTTTATTACTGAAGGAG
AAAATGGATTTTCATTGCGTAGACCTTTGTAGGTCTGCAAAAGCCTTTTT
TGCTCCTTATTTTTAATCCAAGTATCCGCTACATTTGCATCTGACAATGC
CTTTGTAAAAACAGACTGTGCCATTATGGGAATGGATAAACTCTCTCTAT
TCGTAACAGAGTTAGTCAGCAGGTCTGTAAAGTTTGTGTTTGGTATACGC
GAATTTTTAAAGTAAACGTCACCGTTTGCTTCCCATCGTATAATATCAGG
GTGTTTTTTCAACTGTTCTATAATCAACCGTGCGTTTGTCTTACTCGTTT
TGGGTAGACCTTTGAGAATATTGGTCTCTATAATATTCAATTCGTCGAGT
GCTGTAGACGGCGATGATGATGATGTTTGAGGATTCAGACTGTTGCTGTT
GTTGTTCTTGTTTAAAACAATCTCAACAGGTTTTGGTTTTGTTAGAGACT
CGTATCTAGATTGAAGATTGTTCAACTGTTCGGTGAAATTTCGAATTTTT
TCATCGGTTGACATGTTGTACTTGTCCCATACATCTTTCATTTTGGCTTC
GGCTTTGAATAACTCTACCTTTTCTGGATTTAAAATTTCAGTGGCATTGG
TAGTTAATCGCGAATCACTATGATCACCACTATCCAAAACGCTATTATGA
TGGTTTTGGTTCTTGTTGTTAGCATCTTTGAGTATGTTGTATTCCTTTTC
AGTAATGACAACGTATTTGTTTCCAAATGGGATCATCCCAGGAATATCTT
TGGTAGTATTGACGATACCAGTTCGCTACCTACGGTGGTAAGTAGAATAG
GTAGTAAAGCAGATCCGCCTTGCTGGATGAGCAGTTTCTTGCGGTCTTTA
GTCTTTGTTTTCTTGTCCGCGAGCTTTCTGAGTAGGGTCTTTTTAGGAAG
AAGCTTTTTCTTTTGTGAGTGAGTGATTTCGATATTACCCAAAAGTATAT
TTTTGATGCAGTCACAAATGGCGTTGATTTGCTCACTTTTTGCACCTGTC
AGCAAGCGAATTCGATCCTGCTTTGATGAACACTGCAACAATTTCAAATA
ATCACTGTTTTTCAGCACTCTTCTTGTCATAATTACTCTACATCTGTGAG
TTGTCAACAGTCTACCAAACAACGATGAGAATGACTTGACTTGTGAACTG
TCAAGACAAAAATGCGAGATATTGATTTGAGTGTATTCATTTTATATACC
TTTTGGAATATACATAATCTGTGGATGTTCATGAGGGAAAATATTACTGC
TGACTCTGAAACGATCATCTCTTGTTGGTGTGACGTCTAAGAAAAGGTAT
GAGAAGGGTTTCTTTGTCGCATCGCGATATGCCCAAACAAAAAACTTTGT
ATTACCTGGCATAACTTGTCTCGCTAAATTGACAATCTGAGAAGCATCTC
TAGGGTTCTTAAACACCACGATATAGTCAGAGTTTAAACTAATATTTCTT
TGATTTTTATGAAAGAGATTTTGGGTGAGATAAATAACCGAAAGGTTATC
GTGTCTTCCACGTGTGAAAAGCTGAGAAATTCTTTCGTCCTTGCTAGCCT
CGTCCATCATGTCATCCAAAATGATCAAATTCATGATGTTTCGATCGAAT
GTGCTTTCCAGGTCATGTGGAATACCATCTACGTACTCGATATTTTTATC
AATGTTCATGAGTTCTTCGAGTAGGTCAGGTTGGTGTTTCGCATACACCC
ACATGATGCGTTTTGGCATTGCTGGTTTAATCAGATTTTTACCATGCTGA
AGAATGTGTTTCGTGAATACGGTCTTACCGGATTTTCTGCTTCCAGCAAC
AATCATACTAAACGGATGACTTAGCTCCATTTTGAACTGGATTGAAATGA
ATTCTTTTCAATGCTTTGATTCATTTTAACCGTTTTCGAGATCATAAATG
AACAAATCATACTGATCATTTATATAGTTACTTTCAAATTTTCATTTGAA
CAAACAATAAAATACCATGGTTGAATATAATTCACTATTCATCTTATTCA
AAATAGTTTGTTTATTATTCAATTTCTTTTCAGAGGAAAGTATAACTTAG
GGTTTGATGTGATCTTGAACATTTTGTTTAATTTTTTGAAGAGACTGGTA
GCAGCAGCAGTAGAGTGACGTATTTGAGCTTGCATCTTTGCATACCTTAT
ACTTTGTTTTTGAGACATAATATGTCTTCATCATCAGATTCTCTTGATGA
CTTGATAACTATTTTGTTGGAGGATATTGAGATACCTGAAGAAGCAGTGG
TCTCNTACTTCGTTTTTGAGACATAATATGTCTTCATCATCAGATTCTCT
TGATGACTTGATAACTATTTTGTTGGAGGATATTGAGATACCTGAAGAAG
CAGTGGTCTCCGAAGAACAACTATCTTTATCTGGTCGAGAAAATAATGTT
GAAATAATTCCGAATTTTAGTGTCATGAATATGATGGATTTTCTAAGCAA
TATGGAAGTAGAAGAACTATATGATTTTAATGATGATGATGATGATAATG
TTGCTGATGATGAAATTGATTTCCATATAAAAGATGCATCTGATATCAAC
GCGTGTTGTACTACTCTGGTATGTAAGAAATGTAAATATCCGTGTTTCTC
CGAAGATCATTTGAAAAGACACAAGAAAAATTGCAATAGACTGGATACAG
ATAAAGAGTTTTCTTGTATGTCTTGTTTTCGTCGTTTTACCATGAAGAAA
AATTGTAAACTTCATGAAAATACTTGTCGGAAGCGATTGCGCACTGATGA
TATTGTTGCTCCAACTTCATCAAAAAAAGCCAATACGCATCAACTAACAC
CAGCGCCATCATCATCACACAGAAATATTTTAGTTCAAGATGGTGGAAGT
ACTTCGAATTATGGTGAAATTCATGCCGAATATTGGGAAATTCCGACTGT
ATATGAGAGTGCATTCAATGGAAAGATTGTAACTTATAAAAAGAAGTTTG
ATCAATCCGTACAAGCTAACTTTTCTGAGCGTTTGAAAAACGTTTANATT
CAATGGAAAGATTGTAACATATAAAAAGAAGTTTGATCAATCTGTACAAG
CTAACTTTTCTGAACGTTTGAAAAACGTTTGCAACTTTCACAAGGCAGAG
CTCGAGAGAAAACTCGCCGAATCTCGAACTAAAGCTTGGAAATACTATTT
TTCAGTTGTAGCAACTTTTCACAAGCTCAACCAAACTGATGTTTTAACCG
AACCGCCAGCCGTTTTTCGCTCTGAAGTCTTTACAATTAATAATGACAAT
TTAGATGACATTTCACGACACATTGAAATAGCACATCAACAATTATGGCA
TGAAATTGAAGAATTTCAACGAAATGGTAGTGGCTGGGTGATCGATTGTC
TTATTTCCCTTGATATGAGTAAGTTTCTTTTATTTGTTTTCTTACATATT
TTTTTTTTTTGCCTCTTATACTCTGATCACTTTAAAAAATTTTTTTTTTT
TTTTCAGGTTTGATTGCTTATGATCCTTTACGCGCGTCATCTTATCTACC
TCTACCGAAGGGACTCAAGTCCAAGAAATGTTTTGTCAACGTCAAGAACA
CTTTTGATGATAAATGTTTTCTATGGAGTATTTTGGCGCATCTTTATAAT
TTTCCGAATAATCGAAGTCGTGTTCAAAAGTATCAATATCAAGATTATGA
ACAAGATTTCGATTTGGATATATGAACAATATTTCATTTCCGACACCTGT
TAAGCAACTTGATCGATTTGAAAGACAAAACCCTAAGGTGGCTATTAATG
TGTTTGGATGGGATGAGGAAGAGGAAAAGATTTACTTTCGAAGATCAACC
AAATCTTTAGGTCATATTCAGATTAATTTGCTCCTTTTTTCAAGTAATGA
ACANGAGGAAGAGGAAAAGATTTACTTTCGAAGATCAACCAAATCTTTAG
GTCATATTCAGATTAATTTGCTCCTTTTTTCAAGTAATGAACAATCGCAC
TATGTACTTATTACTAATGTTAGTTCAATGCTAACTCGTCAACTTTCTCA
TCATCGTGGAAAGAAGCATTTTTGTTTTCATTGTATGCATGGTTTCCGAA
ATGAAAATATATTGATCCGTCATTCAAAACTATGTCATACACATCAACCT
CAGCATGCTGAACTGCCGAAAGAAGACAATAATGTTTTACGATTTACCAA
AACTGAATATCAACTACCTTGTCCTTTTGTCATTTATTGTGATTTTGAAA
GTATGTTGGTACCAACATCTACTGGTGATTATTATATTCCAACTAAAAAC
CATCCGGGTGTAGAACGACACGAAGAAGATGAGGAAGCAAGTGCGAGATT
AAAGACTTCATGGACAAATAAATATCAGGAACAGCGTGCTTGTAGTTTTG
CGTATCACATTGTCAGTACTGATAAACGGTACTATTCAGATCCTAAACTT
TATTTCGGAGAAAATGCTGCTGAAATCTTTATTGATATGCTTTTGCGAGA
GGAGAAGATACTCCGCAAGTGGTTATTTCGTCAGACACCTATGCATCCCT
TAACACGCGAGGAAAAGAATTATTTTTATTCAAATAACCCGAAATGTCAC
ATTTGTGATGATCCGATTACGTTTGGTTGGAAAGTCAAAGATCATAACCA
TCTTGATGGCACTTACAATGGTATGTATCATTGCTATTATCTGGTAATAC
CCAGACGATTTTTTATTTTCGTTTCCATACGACTCTTTCACACTCTCATG
AAGCTTTATAAGAAATTAATTTCTCTTTCGTTTTAAGGTCCTGCTCATCA
AGGTTGTAACCTGAACTATCGAATTCATACTGAGCAAATGAAGATACCAG
TGGTTTTTCACAATTTAAAAACGTNAATTCATACTGAGCAAATGAAGATA
CCAGTGGTTTTTCACAATTTAAAAACGTATGATGCACATTTAATAATGTC
GGCTGTAAAACAAAGATATGGAGAAATAACTGTCATTCCGACGAACACTG
AAAAGTATATTTCTTTTTCCATTGGTGGTTTACGTTTCATTGACAGTTTT
CAGTTCCTGTTTTCGTCTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCAGGGTATGATGACACGC
AGCCGACGAGACATTTAATGTATTGGGATGCCAACAATCTTTATGGATGG
GCTATGTCTCAGTATCTACCAATTGGTATGGTTTAATTCGTTTGTTATTT
TTAAAGTTGTTCTTTTATGTATGATCATGATTATAATATTATTTTTTGAA
ATTTGATTCTTGTTTTCTAAAGGTGATTTTACATGGATGACAGCTGATGA
AATTTCTGCTCTCAATGTTGATGACGCTAAGGATGATGATGACATTGGTT
ACATTATGGAAGTTGATCTAGGTATGTTAACATGATATCAATCATTTCAT
GATANGGTGATTTTACATGGATGACAGCTGATGAAATTTCTGCTCTCAAC
GTTGATGACGCTAAGGATGATGATGACATTGGTTACATTTTGGAAGTTGA
TCTAGGTATGTTGACATGATATCAATCATTTCATGACATCTAATGCTATT
GTTATTATTGTTGTTGATCTTTCTATATCTTTTTTCATTATAGAATACCC
TCAAGAATTACACGACTCGCATTCTGATTACCCTTTGGCACCGG Coding sequence (CDS) from alignment at sc0002078:3357..10050- >TCONS_00039337 ID=TCONS_00039337|Name=TCONS_00039337|organism=Clytia hemisphaerica|type=CDS|length=4392bp|location=Sequence derived from alignment at sc0002078:3357..10050- (Clytia hemisphaerica)
AATACCCTCAAGAATTACACGACTCGCATTCTGATTACCCTTTGGCACCG
ATGGATGACAGCTGATGAAATTTCTGCTCTCAACGTTGATGACGCTAAGG
ATGATGATGACATTGGTTACATTTTGGAAGTTGATCTAGGTGATTTTACA
TGAACAATATTTCATTTCCGACACCTGTTAAGCAACTTGATCGATTTGAA
AGACAAAACCCTAAGGTGGCTATTAATGTGTTTGGATGGGATGAGGAAGA
GGAAAAGATTTACTTTCGAAGATCAACCAAATCTTTAGGTCATATTCAGA
TTAATTTGCTCCTTTTTTCAAGTAATGAACANGAGGAAGAGGAAAAGATT
TACTTTCGAAGATCAACCAAATCTTTAGGTCATATTCAGATTAATTTGCT
CCTTTTTTCAAGTAATGAACAATCGCACTATGTACTTATTACTAATGTTA
GTTCAATGCTAACTCGTCAACTTTCTCATCATCGTGGAAAGAAGCATTTT
TGTTTTCATTGTATGCATGGTTTCCGAAATGAAAATATATTGATCCGTCA
TTCAAAACTATGTCATACACATCAACCTCAGCATGCTGAACTGCCGAAAG
AAGACAATAATGTTTTACGATTTACCAAAACTGAATATCAACTACCTTGT
CCTTTTGTCATTTATTGTGATTTTGAAAGTATGTTGGTACCAACATCTAC
TGGTGATTATTATATTCCAACTAAAAACCATCCGGGTGTAGAACGACACG
AAGAAGATGAGGAAGCAAGTGCGAGATTAAAGACTTCATGGACAAATAAA
TATCAGGAACAGCGTGCTTGTAGTTTTGCGTATCACATTGTCAGTACTGA
TAAACGGTACTATTCAGATCCTAAACTTTATTTCGGAGAAAATGCTGCTG
AAATCTTTATTGATATGCTTTTGCGAGAGGAGAAGATACTCCGCAAGTGG
TTATTTCGTCAGACACCTATGCATCCCTTAACACGCGAGGAAAAGAATTA
TTTTTATTCAAATAACCCGAAATGTCACATTTGTGATGATCCGATTACGT
TTGGTTGGAAAGTCAAAGATCATAACCATCTTGATGGCACTTACAATGAA
TACCCTCAAGAATTACACGACTCGCATTCTGATTACCCTTTGGCACCGAT
GGATGACAGCTGATGAAATTTCTGCTCTCAACGTTGATGACGCTAAGGAT
GATGATGACATTGGTTACATTTTGGAAGTTGATCTAGGTGATTTTACATG
AACAATATTTCATTTCCGACACCTGTTAAGCAACTTGATCGATTTGAAAG
ACAAAACCCTAAGGTGGCTATTAATGTGTTTGGATGGGATGAGGAAGAGG
AAAAGATTTACTTTCGAAGATCAACCAAATCTTTAGGTCATATTCAGATT
AATTTGCTCCTTTTTTCAAGTAATGAACANGAGGAAGAGGAAAAGATTTA
CTTTCGAAGATCAACCAAATCTTTAGGTCATATTCAGATTAATTTGCTCC
TTTTTTCAAGTAATGAACAATCGCACTATGTACTTATTACTAATGTTAGT
TCAATGCTAACTCGTCAACTTTCTCATCATCGTGGAAAGAAGCATTTTTG
TTTTCATTGTATGCATGGTTTCCGAAATGAAAATATATTGATCCGTCATT
CAAAACTATGTCATACACATCAACCTCAGCATGCTGAACTGCCGAAAGAA
GACAATAATGTTTTACGATTTACCAAAACTGAATATCAACTACCTTGTCC
TTTTGTCATTTATTGTGATTTTGAAAGTATGTTGGTACCAACATCTACTG
GTGATTATTATATTCCAACTAAAAACCATCCGGGTGTAGAACGACACGAA
GAAGATGAGGAAGCAAGTGCGAGATTAAAGACTTCATGGACAAATAAATA
TCAGGAACAGCGTGCTTGTAGTTTTGCGTATCACATTGTCAGTACTGATA
AACGGTACTATTCAGATCCTAAACTTTATTTCGGAGAAAATGCTGCTGAA
ATCTTTATTGATATGCTTTTGCGAGAGGAGAAGATACTCCGCAAGTGGTT
ATTTCGTCAGACACCTATGCATCCCTTAACACGCGAGGAAAAGAATTATT
TTTATTCAAATAACCCGAAATGTCACATTTGTGATGATCCGATTACGTTT
GGTTGGAAAGTCAAAGATCATAACCATCTTGATGGCACTTACAATGAATA
CCCTCAAGAATTACACGACTCGCATTCTGATTACCCTTTGGCACCGATGG
ATGACAGCTGATGAAATTTCTGCTCTCAACGTTGATGACGCTAAGGATGA
TGATGACATTGGTTACATTTTGGAAGTTGATCTAGGTGATTTTACATGAA
CAATATTTCATTTCCGACACCTGTTAAGCAACTTGATCGATTTGAAAGAC
AAAACCCTAAGGTGGCTATTAATGTGTTTGGATGGGATGAGGAAGAGGAA
AAGATTTACTTTCGAAGATCAACCAAATCTTTAGGTCATATTCAGATTAA
TTTGCTCCTTTTTTCAAGTAATGAACANGAGGAAGAGGAAAAGATTTACT
TTCGAAGATCAACCAAATCTTTAGGTCATATTCAGATTAATTTGCTCCTT
TTTTCAAGTAATGAACAATCGCACTATGTACTTATTACTAATGTTAGTTC
AATGCTAACTCGTCAACTTTCTCATCATCGTGGAAAGAAGCATTTTTGTT
TTCATTGTATGCATGGTTTCCGAAATGAAAATATATTGATCCGTCATTCA
AAACTATGTCATACACATCAACCTCAGCATGCTGAACTGCCGAAAGAAGA
CAATAATGTTTTACGATTTACCAAAACTGAATATCAACTACCTTGTCCTT
TTGTCATTTATTGTGATTTTGAAAGTATGTTGGTACCAACATCTACTGGT
GATTATTATATTCCAACTAAAAACCATCCGGGTGTAGAACGACACGAAGA
AGATGAGGAAGCAAGTGCGAGATTAAAGACTTCATGGACAAATAAATATC
AGGAACAGCGTGCTTGTAGTTTTGCGTATCACATTGTCAGTACTGATAAA
CGGTACTATTCAGATCCTAAACTTTATTTCGGAGAAAATGCTGCTGAAAT
CTTTATTGATATGCTTTTGCGAGAGGAGAAGATACTCCGCAAGTGGTTAT
TTCGTCAGACACCTATGCATCCCTTAACACGCGAGGAAAAGAATTATTTT
TATTCAAATAACCCGAAATGTCACATTTGTGATGATCCGATTACGTTTGG
TTGGAAAGTCAAAGATCATAACCATCTTGATGGCACTTACAATGAATACC
CTCAAGAATTACACGACTCGCATTCTGATTACCCTTTGGCACCGATGGAT
GACAGCTGATGAAATTTCTGCTCTCAACGTTGATGACGCTAAGGATGATG
ATGACATTGGTTACATTTTGGAAGTTGATCTAGGTGATTTTACATGAACA
ATATTTCATTTCCGACACCTGTTAAGCAACTTGATCGATTTGAAAGACAA
AACCCTAAGGTGGCTATTAATGTGTTTGGATGGGATGAGGAAGAGGAAAA
GATTTACTTTCGAAGATCAACCAAATCTTTAGGTCATATTCAGATTAATT
TGCTCCTTTTTTCAAGTAATGAACANGAGGAAGAGGAAAAGATTTACTTT
CGAAGATCAACCAAATCTTTAGGTCATATTCAGATTAATTTGCTCCTTTT
TTCAAGTAATGAACAATCGCACTATGTACTTATTACTAATGTTAGTTCAA
TGCTAACTCGTCAACTTTCTCATCATCGTGGAAAGAAGCATTTTTGTTTT
CATTGTATGCATGGTTTCCGAAATGAAAATATATTGATCCGTCATTCAAA
ACTATGTCATACACATCAACCTCAGCATGCTGAACTGCCGAAAGAAGACA
ATAATGTTTTACGATTTACCAAAACTGAATATCAACTACCTTGTCCTTTT
GTCATTTATTGTGATTTTGAAAGTATGTTGGTACCAACATCTACTGGTGA
TTATTATATTCCAACTAAAAACCATCCGGGTGTAGAACGACACGAAGAAG
ATGAGGAAGCAAGTGCGAGATTAAAGACTTCATGGACAAATAAATATCAG
GAACAGCGTGCTTGTAGTTTTGCGTATCACATTGTCAGTACTGATAAACG
GTACTATTCAGATCCTAAACTTTATTTCGGAGAAAATGCTGCTGAAATCT
TTATTGATATGCTTTTGCGAGAGGAGAAGATACTCCGCAAGTGGTTATTT
CGTCAGACACCTATGCATCCCTTAACACGCGAGGAAAAGAATTATTTTTA
TTCAAATAACCCGAAATGTCACATTTGTGATGATCCGATTACGTTTGGTT
GGAAAGTCAAAGATCATAACCATCTTGATGGCACTTACAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039337-exon-sc0002078-1575043694:5733..10050 | TCONS_00039337-exon-sc0002078-1575043694:5733..10050 | Clytia hemisphaerica | exon |
| TCONS_00039337-exon-sc0002078-1575043694:4481..5643 | TCONS_00039337-exon-sc0002078-1575043694:4481..5643 | Clytia hemisphaerica | exon |
| TCONS_00039337-exon-sc0002078-1575043694:3719..3728 | TCONS_00039337-exon-sc0002078-1575043694:3719..3728 | Clytia hemisphaerica | exon |
| TCONS_00039337-exon-sc0002078-1575043694:3496..3584 | TCONS_00039337-exon-sc0002078-1575043694:3496..3584 | Clytia hemisphaerica | exon |
| TCONS_00039337-exon-sc0002078-1575043694:3357..3407 | TCONS_00039337-exon-sc0002078-1575043694:3357..3407 | Clytia hemisphaerica | exon |
| TCONS_00039337-exon-sc0002078-1510915933:5733..10050 | TCONS_00039337-exon-sc0002078-1510915933:5733..10050 | Clytia hemisphaerica | exon |
| TCONS_00039337-exon-sc0002078-1510915933:4481..5643 | TCONS_00039337-exon-sc0002078-1510915933:4481..5643 | Clytia hemisphaerica | exon |
| TCONS_00039337-exon-sc0002078-1510915933:3719..3728 | TCONS_00039337-exon-sc0002078-1510915933:3719..3728 | Clytia hemisphaerica | exon |
| TCONS_00039337-exon-sc0002078-1510915933:3496..3584 | TCONS_00039337-exon-sc0002078-1510915933:3496..3584 | Clytia hemisphaerica | exon |
| TCONS_00039337-exon-sc0002078-1510915933:3357..3407 | TCONS_00039337-exon-sc0002078-1510915933:3357..3407 | Clytia hemisphaerica | exon |
| TCONS_00039337-exon-sc0002078-1491911889:5733..10050 | TCONS_00039337-exon-sc0002078-1491911889:5733..10050 | Clytia hemisphaerica | exon |
| TCONS_00039337-exon-sc0002078-1491911889:4481..5643 | TCONS_00039337-exon-sc0002078-1491911889:4481..5643 | Clytia hemisphaerica | exon |
| TCONS_00039337-exon-sc0002078-1491911889:3719..3728 | TCONS_00039337-exon-sc0002078-1491911889:3719..3728 | Clytia hemisphaerica | exon |
| TCONS_00039337-exon-sc0002078-1491911889:3496..3584 | TCONS_00039337-exon-sc0002078-1491911889:3496..3584 | Clytia hemisphaerica | exon |
| TCONS_00039337-exon-sc0002078-1491911889:3357..3407 | TCONS_00039337-exon-sc0002078-1491911889:3357..3407 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002078 | supercontig | sc0002078:3357..10050 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013087 | Znf_C2H2_type |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
Blast
The following BLAST results are available for this feature:
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