XLOC_023679 (gene) - C. hemisphaerica

Overview
NameXLOC_023679
Unique NameXLOC_023679
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002068:5974..12858+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023679 ID=XLOC_023679|Name=XLOC_023679|organism=Clytia hemisphaerica|type=gene|length=6885bp|location=Sequence derived from alignment at sc0002068:5974..12858+ (Clytia hemisphaerica)
atttGAATTATTTGCCATTGATCACAAATtctaaatttttgctttttctg gTCTTTAAAATTACACATCATGGGTCTTTGAAATACACGAAAAGTTGGTC AGTCTGGTCAGTAGAATCACATCAACAATCAACACGTGCGACTGACAGTA GTGGTGGTGGTGATGCAGTCCTTTCTTATACTCAACCTGCTCCTCTTGCC TGGTTTGTACATAACGTATCTTTCTTTTATTCATTCTCATGTGCAGGAAA TTTGTGCCATAAGTATTCTGTTAGTCAAGATCTCCTTGGTGCACAAACTG AACTCCTCTTTTCGTTAGGAATTCCAATCAACTCTGCTTTTTTCTGGGGT ATAATGCCTGAGTGTGTGTCACGTATATATACAGGgggaaattttggtca aagatTGGTTTCGATTGACTTCCATTTGGGAATGGAATGCAATGCTGACC AGACTtgtaaaaatgattattttcagGACCAGAAATGAGAAAATGANTAT ATATACAGGGGGAAACTTTGGTCAAAGATTGGTTTCGATTGACTTCCATT TGGGTCAAGCATGTCAATCAAACTGTATgattatcgaactaatcgaactt taatgGAACGATAGGTGTCAAGAAATTTCGGCAAAGTTTGATTACTGTTT GATTTATGTTCGATCACGACTTGATTTTAGTTCGAtaggttcgattgttg ttcaaTAATTTtgatagcctgggaatccaagcgtcaAACTCTGTTCACTG tctagattttgatgtttttgtttatgGTTTGACGCTTGGAACAGGTAACT CGTTTGCAGTCAATTTTTTGACCGCAATGCAAGTCTAATCTGATTGGTCA GAGGTAGCCCAATGAGAAGCCAATAAGTCCAACTTTTTTTCGCGCACATT TTTGACGAAGTCACTACGCGTGTGCATAATTTATGGGAAAAACTGACTCA GcagaataatcaaaacaaacttcttCATAATTCTTAACCCAAAAAAAGAT GGCTGCTTGTTGCTGAAAGACTCATATGTCACATGGCTGattagacaggc agctgacgacatctaaaatctggacgactttgggacaaacgtcgagttga tttttcttgttcccatatatctactgatcctaaaaattttactcggcgtc caaaaatttatttaacggaCATGTCCGGTAGTAATTTGTcgaatgatgac gtcaccaccaaaagtgaaaatttgatttcagcatATAATAATGATATCTT TACCATTCGACGCTTTTTTCGATCTAGATTCTaaatcacatcagtctcaa taggtaaaaatttagatttcaaaagttatgacttaaaTTTGACATGTGAT TTTGGTCAATCATGACCCTCTCACcccctaaaaatgtcaaatttcaacgt catcaaatcgaaaattaatttacaccattcgaaagctcgtcaaaaactat ataaaagacattaaacgggtatattcgatttctcagcctaactcgagaaa attgagatcGTAATTCCTTATAATAtgaggcattttttcaaaaatgacgt catagaagagctagggacctcaataacttttcatattcaaatttttactt attaAGATTGATGTGATTTGAAATCTATATCAAATAACGCTTCGAATGGT atgtaaaactttgaaattttgcaacatcaatttttcacttttgcttgtga cgtcatcaattaataaattattctcggacacgtccggtaaNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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TAGGAATATAAACAATAATTTACAATGCTATGGTAAAGTAAGAGAACTGT TTTTTAACGAGAAGCGCGTGCCCAAAGAGAAagctttcgattttttttga gaAGATATGAGAATGGTCAAAtgaattaaaatttgataatcaaacaaaga aaaagatcaaatgaATGAAAACACCAGTTAGCATTCAATTAgtgaaaggc ttttataagaacatgccaaaagaAATGTAGCCAATGATTGACTATTGTTT CTCAATGCTCTCTTCTTTTCTAACAAACGAATTCTAATTCTTTACTATCA TGTTTTACCTGAGAgtagagaaaaagagaaaaacttcTGTACACAAAGTT GGCTAAGATGAGTTTGTGTTTTAATGTCTTTTTTGCGCCTAAACTTTTCT ATATGGTATGACGTCAAagccttttttcttttatttaaacgGGTGAGCCA TGTGGCATTTCTTTCTCTCGCTCGCTATCAATTTCGGGTTTTTCAACATA GAAGATATAAATTATGTTAATCATTCTTCagttatgataaattattttcc tttcttttttatttcttcttttctgttaTTGTTGTTTGATGTTTGTAGCT AacattatgaaaacttattcaTGCATGATTAGAATATAATTAACATAATT TATGCATGGATCACGTAtcgcgaatcgttggatcgcgcatcgtaaattac acaaacccgGTACAGAAGAGTAGTGAATAGGACAAGAAGAGTTTACCTTA GTAAGGTTACTTATTTTTGCTGTAGAAGGGTCTGAAATATCTTCATTTCC TAAAACTAACTTTTTCGTTTGATTCCACTTTCTTCTGGGATTCTTTCAAT TTCCTTGgggtatttttggcaaaattgcatttttcaaaattaatttttgt gttTGACCAAAGAGCGCTCGAATTAAGGCATTGCATGTTATAAGCATCTC TGGTTCAAAAtcctaaaaatgctcttaacccTGTTAATCCTAggcttttt ttttgggggggggggttcaaaaATAGGTACAGGGGCTCTGTTGTACCACC TACcctaacttttgatctagttgctTAGAAACAATTTCGCTCAgttaaaa atgctttttttatccTGAATATGGTTTAATgtatttgacaaaaaataaag ttttacaATTCTGAGGtgtcaaaatttattttattatgaAGCTTAGTACA AGTTAGGAATTTAAAGTAAATTCCATGTATGGAGCATTATTTTTTCAGAA GTTATAAATACCACTTAGTAATATGCAAATTTTAATTGGTAACAGTTCTC CACTGTGAAATGTTGTaacacttttgttttcatcacTAGCTCACAACAAG ACATCAAGTGATCCAATCCATGCTAGTTCACGATGTCTTGGTGAAGCGAA AGGCTTCTCTCGACCAGTTCCGAAAGGGACTGTCAACCTTAAATGTGCTA AAGATCATCGAAGAAAACCCGAAACAAATGCGTCACCTCTTTGTAGAAGG CCCATTAAACGCAGAAAAAGTCATTAGtcatattgttttcaaaaaccatG ACCAAGAGCAATGTGACACTATGCGTGATGTAATAAGATCGTTCAATTCA GACCAACTTACACAATTTTGTTCATTTGTGACGGGATCGCCTGTTCCATC TGTTGGGGAACGTCTTCATGTCGAATTCACTCAAAGCCCTGCTATCTCAT CTTCCACATGTGCGCAGGGGATTGTAGTGCCTCCCATTGTATCCAGAGAA TTCAACCTATTAAAACCAGCTCTGTTAGCTGTAATGGACACAGCTTCCTT TAGTAGAAATTTTAACACAATGTAAAactatttttatcatttttctgtTA TTTTGCATACATCTAGATTTTACCTCATTGGACAGTGATTTTGAACGTGA TATGTCTCTCATTAAAGTCTTgttacttttcattttatttaaattttcgt tattttgtttcaatttaCATTGTTATATTATGTTTCCTGGTTGGACAGTA TTTTTGAACATAATTTGTCCCTCACACACATTCCAtgcgttaaattagaa aaattatgGTAGTTCTGATTGTACACATCAAAATCCAGAAATACATTTAG GGAAAGAGAACTGAGGGGAAAAATCTTTATTTCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039296TCONS_00039296Clytia hemisphaericatranscript
TCONS_00039297TCONS_00039297Clytia hemisphaericatranscript
TCONS_00039298TCONS_00039298Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039296-proteinTCONS_00039296-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002068supercontigsc0002068:5974..12858 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.69 6.84 4.2 4.78 56.24 39.49 21.25 23.16 8.95 12.45 11.03 7.77 9.7 9.2 15.34 17.08 18.96 14.65 3.97 6.88 14.08 16.96 7.18 8.58 16.03 12.46 7.3 3.99 4.48 3.99