XLOC_023537 (gene) - C. hemisphaerica

Overview
NameXLOC_023537
Unique NameXLOC_023537
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002010:26656..32713+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023537 ID=XLOC_023537|Name=XLOC_023537|organism=Clytia hemisphaerica|type=gene|length=6058bp|location=Sequence derived from alignment at sc0002010:26656..32713+ (Clytia hemisphaerica)
CGAGCTTAACCTGGAAGTCGATAAACAGTTGTGTTTATCCCCTTTTTTTC
AGCAAACGAAAAGTCAAACCTTAATCATGAGTGTCTTCATACAACAGGTA
AAGAATTATTAAACAACATGGACTCTGTAGTGGACGACTTGACTTTTTCC
CTGCTCTTCTCGAGTGAGTTAGGGCAAGCTCCTAGATCTTTAGTAAAAAG
GATTTGGGCCAGTAATCTATTGCAGCCGGTGATCAgcaactttttagaaa
tatgtgttcttatcttctagcccagctggcacacaacgttgtttcaacgt
ttatctatcgttcacaacgtccatgtaacgttagatgaacattgaaacaa
cgttgtgtgccagctgggagaaGACAACATGTTAAAACCTTCAAGTTTTT
TAaatgatctgttctgatttcTATAGATTTATTATTGCTTTATGGTTGGA
TGTGTTCTGAATTCTAGGAAAGACTTTGTGGCAAGATATACTTGTtggat
atttgttttttttttccttaaaatgtgttctgaagctttctagggttacc
tagacaacaagaacacattATACGACCTTGAGTAAAACCCTATCTCGTCA
GAACACTTCTAGTTGATGGATTCACGAAACCCCAATCAgcacagatcaat
atttctagctgaaacatactctcagaacacatcggaaaaaaggcTGCTTT
CGAACCTACTGATTTCCTTGAGAATAATCCCGTCAAAGTAGTTTGAATAT
TTTGTAAACATGGAGGAAGGTTTGACATCTTGTTCCTGATTTACGATGAG
TCAATGAGTCAACAAGTGTccatgatctaagattgaaaagaaagacGGAA
AGGTCTAGATTCCAATTGTACTAACCCACATTGTAATAATCGAATTAGCA
CATTTTGCACAGAACTGCCGCACTATGCAATACAAAAGGCTGACACACAT
TGTAACAACACCCGAAGCACTTTATAAAATAGGCCTAAAAAGGGTAAACT
GAGTTTGGCGTTTATTACTAAGTGTGTTAGTACAAAGAACCGAGATAAAA
ACATTACAATTATAGAAATGGAAAGATGAGACATTAACATGGAAAAAGGA
AGATTATGGTGGACACATCAAGAGCATAAATGTCGATCCTTCGCGAGTGT
GGAAACCTGATATTGTTTTGTACAGCAAGTAAGTTTGAAAGGCTCCATGG
CCTTACCAACATTGTTCCAGGATATTCGCAATTTGGATaatgacatttaa
aaaaatcttttcttatTACTGATTTGTCGATATATAGTTAAGACCGACTT
TGCTTCAATCAGATAAGACATACAGctgctaaaaataaaaatagaNAATT
TGAATaatgacatttaaaaaaatcttttcttatTACTGATTTGTCGATAT
ATAGTTAAGACCGACTTTGCTTCAATCAGATAAGACACACAGctgctaaa
aataaaaatagaccaCCGATTTCGAATCTGATAATGATACTAGGTTAAGA
ATAGAAATTATATTAATttgctaaattaaaaaaaaaaatcttgctaAATT
CTCGTCAAATTTATAAATATCCTTGAATCGTCGAAATAAGAAAGACGCTA
AGTTGCACCAAAATTTTCGAGTGCTCAAGTCCTTTACAGACTATTAAAAT
AGTCgcttattcattcattcattctttcattCATTGCTTCCTATGCTTTG
CTTATAATAGTGCTGACGAAGACAAAACATTCGGTGGAAATTTAGATCGT
TTAAACACAAGAGTTCGTTTATTTTACGATGGTAATATCACGTGGCTTGC
ACCGATCATTCTTCGATCGCAATGCAGTATCGACGTCACTTATTTCCCCT
TCGATACGCAAAATTGTACTTTGAAATTTGGCAGTTGGACATATGAACGA
GCAAGATTGAACCTCAGAGATGGAGGGATCAAAATGGCGCAAAGTAAGCT
CATTTTAGAAGCCTTTGTGGAAGATTGTATACAAGATTTTAGCCATTACA
CTCATTTTCAGCTCAGTCAATCCCGATTTATTCAGTTTTTAAGAACACAA
GATCAACACATTTCGAAACTATAAATTATGGACCGAATTTAAGCCTagga
aaaatattcttataatgtCCTTAATATGGTTATTCTATGAGCACTTCAGT
ACTAAGCCATTTTTCAGATATAGGGCTGggatcactgacctttatatatc
cctgggccaagttactcaatgccggcctagcaaaatgttatgatcggagt
ttctttgaaattggtacccgcggagagagcgGTAGATCTAATTTCGCTGG
TACACTAACGATGTAGCTccgtttgtcgttaggcaaagtttcaaacacta
ccATGGCTTCTTCTCGagtaccaactttcaaaaaacttcgatcaataatg
gtggatatagcttagtccagggatgtataaaggtcagtggctgTGATCTT
AAAAATTTATCCGTTTATTTTGACCAGAAAATAGCTCCTTCTTCTTCAAA
AGAGGCGTGTAGAGCCACACGTAAAGGTGAAACATATATATGAACGAGCA
ATCTCTTTTTCTCCATTACAGCTAAGGAGTACGAGGCAAATTCCGAATGG
AAATTGATTTCCACTTACAACATGCGCCATGACATTGAATATCCATGCTG
TAAGGATGAATTTTACCCTGACATCACCTTCCATATCGTCATTGCAAGAA
GATCTTTGTTTTATTTGTGCAATTTGATTTTCCCCATGACCGTCATTGGA
ATGCTGACCATGCTCTCCTTTCTGTTACCTGCAGAATCGGGTAAGTgtaa
taaattgatttttttttacttttaactttttaactttttaagtcagtgtt
ttttacacttttggcaaaaacgtgaaaactaattttcgtcaaaaacggTT
TTTTAAGTCTAAAATCACGATTCTTGAGTATTTTGGGATGAAAGCTTCCA
ATAAGTTGCTAATTATCATTTCAAAtctgttgaaattttttcctcGAGCA
ATACTGGatgagatattccaaaaaattagattttgtgtttttctcatttg
aaattGTTATATACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATTTATGATTAACTGCT
CCAAACTTTGAAAGATCGTTACTTTTAGTACAATAACGCTATATAGTTCA
TTTAAAAAGGAATGGAATCTTTAATCTTTTCTCTCTCCGATAGAACCACT
AAATCTGATAATGAACGAAAACTTGCTCTCTAAAATTTGGTTTCAAAAAA
GTGcccaaattttcacgtttttgccaaaagtgtaaaaaacactgacTTAA
CTTCACTCATTGCATTGTTCTTTGTTATTACAGATTTTGTCTCCTTATGT
AAATAAGTTCTGCGATTAAAATATACCTAGGTAGTGGAGGGCACAACTTC
TGCATGGGATTTTTTAACTTTACTTTTATCACTTTCTTTTAAATACTGAA
CATTGAACGAAAACGCATCGACTCATTCATGACCGAGCTGAAGGATGGAA
CCCCATCCTTATCCAAATCAACCAAATGTTCTACCTTTTTAGTAAatgta
gtttttattgaaaacgaGGCTATTGCcctattaaaaacattttacacCAT
GTATAAGTTTCAAAGCTAGCGTCTTAATGAATTTGACGTCTCTGCCAGGA
CTTATCACTAATTTGTTAGGATGTACACGTTTATTCttcataagaacatc
aaaagtttttgaagcctttcgatttctaaactttttgagttttaagccta
aaaacgttcttaacatgtccttactttcaccatttttgagtatttttatc
cattttcttaagaaatcggttGTTTTTgtgtccgcaaagccttaaaatgt
tcttatcttgcTTTTAATATCTTGGGCATTGAAGCCTTGTGTCTTAAATa
gttttaactcgtgttttaactcgagatattaacccttaaaaacagtgttt
ttcagccagaaacatctgttttgtccagtttttgcgcttttggaagctcg
atatctcgagttaggtactgaaatcacctatacttgcaatgattcttaat
tttttgagagtttttaaaaaatatgcAGCAGGTCTccattttctcaagct
aaaattctaatttttgaccctataaTTTTTGCATGAGACTGTCCGAaaaa
cacaccaaagtgtcagaaaaaaattggcacccaagttttgagccttaaat
gtttcttgcatgtttctaaaaattttgaaacaatcagcctatttttcatg
cagagaaaacatttgttttgattggaaggttcttaaaaaaccgaattaaa
aatgttattttctcattctcagcatcagcatgtttcttagtttttaggca
ttctgagcctcatgttttaTAAAAGTGTGTTTTTTCCGTAGGTGAACGAA
TTTCATTAGCTATCACGTTGCTATTGGCAATGACAGTTTTCATGTTGGTC
GTCGCAGATATCATTCCGGCCACCAGTGACGTCATTCCTTTGGTTGGGAT
TTTCTTCAGTGCTTCGATGATTGAGATGGTGATCATGATCGTTGTGTTGT
GTTATATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039089TCONS_00039089Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039089-proteinTCONS_00039089-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002010supercontigsc0002010:26656..32713 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0	0	0.06	0.08	0	0	0.07	0	0.18	0.17	0.04	19.99	18.52	0.03	0.1	3.87	3.96	35.14	62.84	9.44	9.03	1.61	3.14	4.4	4.43	0.86	0.58	0.06	0