XLOC_023491 (gene) - C. hemisphaerica

Overview
NameXLOC_023491
Unique NameXLOC_023491
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001999:15256..20015+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023491 ID=XLOC_023491|Name=XLOC_023491|organism=Clytia hemisphaerica|type=gene|length=4760bp|location=Sequence derived from alignment at sc0001999:15256..20015+ (Clytia hemisphaerica)
TTAATCTGAGGATTTATAGAATGCGACTATTAgtatttggctcaaaaatc taatttttcttcattatggGCTAATTAGCCtgtatgaaataggctaattt gCTTATTCTAGGCCAATTAGCTGATATTCCgagatgataggctaatttga agttatCCCTGCCTGACTGGTCTGTTTACACCTGTTTCTTTAAAGCCCTT TTTATACTTCAGGCACAACTCAACAACTCAACCGACCAGGAAAGAGAATA GTACGCTTATGGTGTAAGCATGTCTTTATTTcgtaaacaaagatggtaga tcaaacactttcgatttcttaaaaacttttaagtttttcaagattttcac aaTATGAAATCATTATGCCACTTCAGTTATGGGAGAGTTATATTTACAAA GAGATTATGCTTTACAAAGAGATTATGCTTTTCGACGAGGTCAACAAAAG AtgaatttgtaaattttgtaagAAAAGTTTTACCAAAAGAAACTCAAGTT GGGAGTGTGAATTTAActcaaaatgaacaaaatggGACTGCAATTGTGTG TATTGAAAATGAGGCAAGTTTGAATGCTATGACTGGTAAAATGATGTTAG AACTTCATGAAGTAACGCAAGAGTTAAAACAATGGCGTCATGGAAAATTG GTTCTTTTGAAAGGAAAAAGTAAACAATTTTGTAGTGGTGGAgatttgaa gaattttatgAATTATTTGAAAACACCTGAACTAGGTTATATGATGTCTT GTTTTATGCATTATACgatgaaagatttttcaaaacttccaaTGTCAACC ATTGCCTTGATAGAAGGACAAACCTTGGGTGGTGGAGCAGAGGTtctgtt atttttatttaattgatatttttttgatttgatctACTACTACTGTGAAG TTCAAACTTGCAGTTTGGTTTTTATCCCGTCTcgtagaaaatttgatctg tttgttCTTTCTTGAATCTactgataaaaaaaataaaatagaaattagAT ATAATTTCAACCAGCAGAAAGATGGAAAGAAAAAATGTCTTGTCCATCTT GTACTGTACACTGTATATATATAGCAAAAATTGTCAAAGTAAATTTGCAT ACCTATACAACATATCGACTTTTTTTAACCTCCTAAAATtatgtttaaag gttttgtttttaaataaaattgacatcGTTTGCTTTACTCATCAATTTAa ctattttaatttacaagctttttgatattgaattgacacagatgtggagc aagattccGTCACAAAGGGAAAACGAAAAACATTACTTATATCGGCCCAT ATAACAATGGCAGAcattgtcctgatatgaaacatgtgtctgatatgggc acacttatgtaaaaatttaaaattaaaaaaaaggagaaaaagttaattaa aacctttaaactAAGATGTCATTTATATTTACACAtccttttcattttat tatagaTAACAACAGCATGTGATTATCGATTGATGGAGAAGTCTGCATGT AAAGAATATAAATTTTACTAACGTGGTTGAACACTAGACTTCCGAGACTT GTGGTTCGTTTGATGTACTTTAGGTGTACAGCTTTTGTGTACAAAATCTT CATTTCGCAATTTTCGGCTCTTTTTCTCTAagttcttattttaaaaaatt cgcAATTCGCGAAAGTCTACGCTCATGAAAAATTCTACGTAAAGAAGAAC GCTAAAAAAGCTATAAAACGTCAAATGATgataaatatgaaatttcaagt aATAAGCCATTAACttcttaaaagttaagaacaaccgTTTTTATCCTTTT TATCTGATTTAACATTTGTCGATTTAAAGTCAGCTTTTTTTATTAATTAG AAGTtctcatttttatcaaattatcatcTAACCATTTGCGAAAATATAAC TCGAACTTTCGAAACTTTCTGCTCATGAATTCTGTACGCCCAAGGTATTA TTTTGACGTCGTTAATCGTCTCCAAACGTACAAGTATGAATAAACTTTGC TTGATTTTACGAGCGAACTTTTACCAAAAAGGTGATCTTATTAAAAATTT CGCGTAGGTTTCAATGGCAAATTTTACATTTGGTGAATGAAAACGTGATT GAAATtaaccaaaaatctaaattcaattttttttgctgttcgACCTGCCC TACCCCGCCCTACAGTTACATTATTATAGTGTCGtattacaatttatttt atagcaatTGGTTTTGTTCAATCTAAACTTGGTATAACTCCTGGGTGGGG TGGTGCAACAAGGCTTTCTCAAATCGTTGGATCGAGAAATGCGATGGAAT TATTACTCTCCGGAAGAAGGCTTTCACCAAACGATGCAATTCAGCTGCAA CTCGTAGACAAAACATTTGATggaaatgtaaataaaaatttttctctttc atATTATAAAATACAGgttaaatatatgttttatggGTAGCTCTCATAAA GCCTTGGCTGTTAATtctaatttcagatttttttcaaagtgaagaTGTAT CAACTTTTTAGATTTTGTCATTTTAACGGAATTTTCTAGATCTTTTTATA CCTAATTTGAAGAATTTAATGTATGTATGGCAAGCAAAATTACAAATAGT TGTTTACGttatttttataataaagaGAGAAGACCAAGAAGACGCTGTAG ATTTTGCAATACAATGGGCAGAAGAAAACGGTCTGCTCTCGTTGTCTCCT TCATTAACACaagaaatttgtaaattgatgaAAGAGGGAAAACCAAATCA AGATAAATCATTCCAAAGCGAAAGGTTTGTCATCTTTACTTTCAGAGCCG GTGAAAACAGAGCAGGCGATAAGCTTGAGAGACTTCCGAATGTTTTTACT TCCCTAAAAAATCTCATgctttggattttgaaattccttaaccctattcg gcctagggggggagCTGTTTCAAGGTCATGGTAATAGcttctgaaataat agagcttttgccactaaattttctgtaaattcctaacttttatttagctt aaaaataaaaataaattgacacctaaaaattgaGCACCTTGAGCAtaatg acatttctgacagtaaggtatCACAAAAACTGACatttttccaatacaaa tttattttttatgtcaaatatagcgtttaaactgtaatttattgaatatt tagaataaaataagcattttaaactcaggcaaccttttttctaaagcctt tattagaatacaatagctatttataagaacaaaggaaattttcggttttt ttttttactttgggcagatgagtgacgtcatcaaaaaaatctattttcaa aagttaccttatgtgacaaggatcttgtgtgccaaaaaaacccactagat caaaagttgaggggtggtacaggaaaagcccccctccctcctagttttga accgccccaaaagcctagtatgaatagggttaaacatTCTAACAGTGTTT GTCCTCGTAATGTTCTGATTAGTCTGAATCgaagacctctacaaaaccac tgGTAGTACAATTCCCACAGCTTCTGGTGAGAATCAGTTGTGCCTAATTC GTATCGGAGAGAGTTCAATTTCAAAGACATCAcgtaatacacccctgtct cggtgATCcggtaaagttttaaaaacccACCTGGCGGGTGGCTCTGGCGG GTggctttgaaaataaataaagttcACCAGGCTTCAACTTTAGATATCAA AATCTCTCTGGGGTGAGGAATTTTAACTCGGCTTTCATCGTGTTGGggaa aaatctttcattttaaagcattgCCCAGTTTGTTTTTCACTGATATGTAA TACAAATTTCGATTATCAACGGGTTGCTCTAATTGATGCGATTTTTGACT GGGGTATGAcaagaaatttacaaattttggccgTGGTAGagaatttcaat gaattttgaCCGGGTCACTCATCGTCATTCCACTGGGGCTTTAAAATTAG GCCAATTTTGGCAGTTTTTTTTCACCAGGCTATCCACCGGGGTGGATCTT ACCGTGTCACCAATACAGGGGTGTTTTCATGTCTGAGGCTAGACTTTCCA ACCCCTCGCGTAGGTAAAAACTATCTTATATACGATATACGGCTAAGAGT GGCAAATTTCACGTCAAGAGTCAATCCTTACAGTAGATCATCACTAAGAG AAATAACaacaaaaaatattctttacGGATAGATGGNAGAGTGGCAAATT TCACGTCAAGAGTCAATCCTTACAGTAGATCATCACTAAGAGAAATAACa acaaaaaatattctttacGGATAGATGGACAGTATAGAACTAActattcc cattgaagaattatattctggttttcatgttattagatgctgttttagag ctttagagctagcctgatgGATAGATGTGCAAAATTAAACTGAAGAAGTA CCAACAGTATCAACTCATTCtacatttttgtttatttctttaatttaacA GAGAACTTTTCGGACGTGTTTGGCAAGGCAACGAACATCTATCAGCATTA TCTAAGAAGATAAAACATCGaaaataaattgtaaattttgaatatattat atcatttcatttttttaaagaattaatttttttctatatgATGTTACACa tcattaattttttagttttgcTCCTACTGAAGATCGAAAAATTAAGGCCT TGAAATTAATCTTGTCTGGTATATCTTATGCTCTTTTATTTCTTGAATGA TAtcgttttccaaatttttgaaaacatagtAATTTCCATGAGCATTAGTA TCATCCATCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039039TCONS_00039039Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039039-proteinTCONS_00039039-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001999supercontigsc0001999:15256..20015 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ECHDC1ethylmalonyl-CoA decarboxylase isoform 5 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
25.69 24.7 12.94 10.64 2.82 2.52 3.66 3.53 3.52 3.48 3.55 3.24 2.76 3 4.91 5.66 7.6 8.46 2.28 3.14 7.82 8.26 12.08 11.37 3.64 4.79 4.03 3.02 6.87 7.8