TCONS_00039039-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039039-protein
Unique NameTCONS_00039039-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length309

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039039-protein ID=TCONS_00039039-protein|Name=TCONS_00039039-protein|organism=Clytia hemisphaerica|type=polypeptide|length=309bp
MKSLCHFSYGRVIFTKRLCFTKRLCFSTRSTKDEFVNFVRKVLPKETQVG
SVNLTQNEQNGTAIVCIENEASLNAMTGKMMLELHEVTQELKQWRHGKLV
LLKGKSKQFCSGGDLKNFMNYLKTPELGYMMSCFMHYTMKDFSKLPMSTI
ALIEGQTLGGGAEITTACDYRLMEKSASIGFVQSKLGITPGWGGATRLSQ
IVGSRNAMELLLSGRRLSPNDAIQLQLVDKTFDGNREDQEDAVDFAIQWA
EENGLLSLSPSLTQEICKLMKEGKPNQDKSFQSERELFGRVWQGNEHLSA
LSKKIKHRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023491XLOC_023491Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039039TCONS_00039039Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001753Crotonase_core_superfam
IPR018376Enoyl-CoA_hyd/isom_CS
IPR029045ClpP/crotonase-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001753Crotonase superfamilyPFAMPF00378ECH_1coord: 58..253
e-value: 1.5E-32
score: 112.8
NoneNo IPR availableGENE3D3.90.226.10coord: 46..309
e-value: 1.3E-51
score: 174.8
NoneNo IPR availableCDDcd06558crotonase-likecoord: 58..252
e-value: 1.91522E-52
score: 171.589
IPR018376Enoyl-CoA hydratase/isomerase, conserved sitePROSITEPS00166ENOYL_COA_HYDRATASEcoord: 150..170
IPR029045ClpP/crotonase-like domainSUPERFAMILY52096ClpP/crotonasecoord: 58..308

Blast
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BLAST of TCONS_00039039-protein vs. Swiss-Prot (Human)
Match: ECHD1 (Ethylmalonyl-CoA decarboxylase OS=Homo sapiens GN=ECHDC1 PE=1 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 3.666e-55
Identity = 98/261 (37.55%), Postives = 158/261 (60.54%), Query Frame = 0 
Query:   50 GSVNLTQNEQNGTAIVCIENEASLNAMTGKMMLELHEVTQELKQWRHGKLVLLKGKSKQFCSGGDLKNFMNYLKTPELGYMMSCFMHYTMKDFSKLPMSTIALIEGQTLGGGAEITTACDYRLMEKSASIGFVQSKLGITPGWGGATRLSQIVGSRNAMELLLSGRRLSPNDAIQLQLVDKTFDGNREDQEDAVDFAIQWAEENGLLSLSPSLTQEICKLMKEGKP-NQDKSFQSERELFGRVWQGNEHLSALSKKIKHRK 309
            GS++L Q E NG  I+ + N + +NA +G MML+L E   EL+ W  GK ++++G    F SG DL N +  L TPE G  +  FM  T+  F +LP+ ++AL++G  LGGGAE TTACD+RLM   + I FV  ++GI P WGG TRL +I+GSR A+++L    +L   +A+ + +V++    +  D+  +++ A +W ++   +   P + + + K +  G+    +++ Q+ER+L G VW G  +L A++KK K  K
Sbjct:   53 GSIDL-QKEDNGIGILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDL-NAVKSLGTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSS--DETKSLEEAQEWLKQ--FIQGPPEVIRALKKSVCSGRELYLEEALQNERDLLGTVWGGPANLEAIAKKGKFNK 307
The following BLAST results are available for this feature:
BLAST of TCONS_00039039-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ECHD13.666e-5537.55Ethylmalonyl-CoA decarboxylase OS=Homo sapiens GN=... [more]
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