XLOC_023396 (gene) - C. hemisphaerica

Overview
NameXLOC_023396
Unique NameXLOC_023396
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001969:19846..27300+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023396 ID=XLOC_023396|Name=XLOC_023396|organism=Clytia hemisphaerica|type=gene|length=7455bp|location=Sequence derived from alignment at sc0001969:19846..27300+ (Clytia hemisphaerica)
TAAACTTCAGAACTAATCATTTGGAGAGAGATTTTCCTTAAAATATGATG
CTCAAATTGCTTTTGTTTGGGACTTGTGCCCCTCACAAAATTTCAGTTTT
ACTTCCTCGAAGATCAGAATAGATATTTATGCTTTAAATGTTACAAGTtt
tataccgttgaaaagataagctAAAGACTCTAGGCCGCTAGAGAGTTACC
AAACTGTTTTTTGctgcttatttttttcacttcaacaAACAGACGGGTAC
CATTTGAACTTACAATGCGAAAATTATTTGGAAAAGATAACGAATaaaag
accttttcataaatcacgTCACGAACAACACTTACctcgttttgaaaata
ttgccatggtgattaactcccagtggTTTTATTAAAACTTTTACTATTAA
AACtattctattcataaaaaaatcatttcatgtgtcaagggacataatca
ccatggtaattgtttggaCACGAGGCAAGTTATGTTAGTGGAAAAACATt
caatagtgaggttaagtaaatcggtaaaatcacgacgacgaacgaaaatt
taacaggctagtgagtttcaaccaatcaaatttcgtttttccactagcct
attacatttttcgtccgtcgtcgtgattatcccggtatacttaacctcac
taatgaattaaaaaaacgaaaaagttaaaattttattagATTGTTCATTT
CGAtattttggtttgaatttctAATGCTTTATGATCACAAGATTTCATAG
GCACAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGATCATGATAACCAATTGTTAAGTACATCTCTTCGT
AACTTTCAGCCTCCGCATTGTAATGTTCCACAATATCCTTGGCATAAGGT
TGAACCTTCCCTGACCATTGAGTCGTACGTTCTACAGCTGCTTTAACTGT
CTCGTTCACTTTGGTAACATCGATGATTTCAACTGTTTGCGCCATCTTTC
CTCTGCTCTTTATTGTTATAATCTAGAacgaaaaaaggttttttaagtTG
ATGTCAGTTCCGCAAGTTGCATAGTTCTGCAGCGCTGCAATATTCCGTAA
AGTTGCGTTTTTTTCGCAACGCTTCAACCGGGATGCGCTACACTATTCTA
CGCAATTTGCCAACCGGGATGCGCTACATGATGGTTTGATATTCTGTGGA
TAAATGAAAGctcaaaaagaaattaataaGTTTTCCACGAGATGATACAT
ATCTTATTTTCATAACCTTTCACCTTTTCTTTGTCTTTATATAGAATACA
AAGGATGAAATCAATAAGTAGTGCCACGTATAGACTTATGATTATGTTTA
GTTTCGAGAATTTTGGGCCACGTCAGTTTCTTAAGATATCTAACTTCAAT
TTTAAAGCTTTGGTATATTGTCCGTTTGTTCCAAACGAAACTAACTTTTA
CTTAATAATAATGATTTTATGACAAAATGGTTAGATAAAATTTATTCAAT
ACgttgtcttttattttttggtaTTAATCCATTTTCTAATACGTCCGAAA
CTCTCTCTCCATTTTTACATTCAAACCAATGAACTTGCGGTTGCCTTATA
AACATTCTGTTATAACCACTTTCAACGGTCATTCGAGCATTGTCTGTAGT
TAACGAATTTATTGGGTCACACATAATAAGTTTTCTTCTAGACGGTCCTC
CATGTAAGTCTTTGTTAACAGCGGTATAAGCTCTGTTATCCATTTTATCT
CTTTCAGTAGCATTAAGAGAAGGCTCAATTTCATAAATTCCAATTTCGTA
TTCAAATTTAACTTCAAATCTGACAAACATGTTACGTAACGTAGTACCAT
TATATTTTGGTTGAAACTTAAAATAGATTGGACGCATAGCTTTTTCTGAC
GAGAACGGTTGTTCTTTATACCACCATCTTTTTGTTGATCCAGGACCAGG
CCATTGTTTTGGATCAGCCCAATCTTCTTTAGCATATAGTCCAGCGTGTT
CTACATACGGACTCCAATCTTGTTTTGATAATAATCGATAAGGTGTTTGA
GTTGTATAAGCAGATACATTACTTGGTATATATTGATGTaactcattttc
tttatttcgtTGATCTGTAACGGGTTTAAAACCAGGCCACCGTTCGTCTG
CCTCTGTTATAGTACCCGAAGCAAACCATGTGTTATCACCGGCGACAATT
TCATCATTTGTTTCCGGGTCAAAGTTTTCTTCCCAACCTCCTATTTCAGA
ATTTGGATGAACTAAAACACCGGCCGAATAATCAAGAGGATTAATAACAT
AAGCTTTTCCGTGCATACGTTGCCATTTGTCTATTTCTGGATGGGTAACT
TGATATTTATTTGCAGTATTAACAGTTTTCTTTGGCTTTTGAAGGTCATA
TTTGATAAGTTGTTCGACAGGGGACCATAATTCATTCATTGACCGTAATA
GTCTGCTATCGTTTGTCCATTGGGTAGCACAACACGGTTCTTCAGGTTTA
TTAAACATTTCTTTCCAATCAGCAGAGGTAAACTTCCAAGACAAATCATC
ATAAACGAGGTCCGGTCCAACATTTTTAGCATAGCGGCCATTAACAAATA
ATTCTTTTGCTTTTTCAATTTCGGGAAATACGTCTTTAGTATATACATTT
CGTTCTGTATTAGACCGAGCCAGTTTACAAAGTTCTACTTCATTTTTATC
ATCGTCGTTTGAACATACATTTAAACTATATGTCGGTGTTAAGTAATTTC
TGTGATCCACAGGATCCCATACAAAGAATGTTTCATTTCCAACTTCTCTG
CCTACGTCTACTCCTGCCCCTGTTTCAATTTGAGTAACTTGGATATCATC
AATAACAACACTAGCTCGTATTGGATACCatgcttttcctttttttgttt
catcttTGATTACACTTTCGCCAATTGGTAATTTCATATCTTGCCAGTGT
ATACCAAATATGTTTTCGCCATCTTTATTGTCGGCAATTTTATGTTGTGC
TAATATAGTTCGTTTAAATAGAATTTTACGAAATCCTGATTCAGGTTCTG
GTGAATTGATTTGGTCAGGGACCGCGATATCTTCCGGTTCAGTGATCATC
TTCTTCTAAATGTGCTTCGTCCATAGCACGTCTTAACTCTGCTTTAACAT
CGTTCGCAAATGGGACTAACTGTGTATCAATCATAGTTTttatatcttgt
attttttgATATAATGGAATAATTGCACCATTGTAAAAGTTTTCAATAGT
TTCTTTCTCAATAACATAATGTCTTACGGGATCAGGCATTGTTGAACCGC
TTGAGTCTGTTTCACCGTACGAACTGTTACTCGTATCGGGTTCTTCGTTT
ATGCTTTCTCCACTCGTCTGCGTCGAATTCGCTGGGGAAGAATTCTCCGG
GGGCTCCTCGTTCTCGGGTTGttgtagcccggggtccacttagagctttt
ttatggtctttttggcgctgataagtggcccggtagtatatggtaatatg
cttttgcttaggcggactgtaaaacagtccgccagatttttgttgttttt
ggaaggtaaaaatagtacgaagcaatgtttttatttgagaatagggcatt
gcaaatctgttattgctGTTTGTTTCACATTTTTGATTACATCTTTCAAC
TCttagtagtttttttgttatttggatttcaaacattttctttcaaaatg
gcgaccttgccaaacgctcctagtctacttcactggactcagcgtcataa
aaaattatcaaaaagcaaagttcagccagaagtagactctagtctagggT
TGTTGTTGCAACGGTTGATCCCTTGGTGGCATAGGTAACCCGGTATGAGT
CGTCCAAGTTCCCCGTTTTGcctttttgtaatattttttgtccGCTGGAT
GGTAAAAGTGCATCCCCCGCGTCCGTCGCGATCTGGTTGCCATATTCTTT
AACTAACGTCTTGGACTTGTAACCAACAGTTGTGATATgagtttttaaat
gttttcgagaACCATTACCGCTAGGTTTAAATAAGTTATTTACTAACTCT
GATTGAACCGGTTGTTTCTTTCCCAATTGTTGATAATTTCATTTGTTGTA
TGACTAAAGTCTTTTATATTTTCCCTcataaaattacttttttttaacaa
tGGTTCATTGTCTGCTGCtgtctttttatatatttccttTAATTCTATTC
TTTGTTGCTTtgtcatgttttttttaaaattatatctcTTTTTTGCTTTA
CGAAAGTCTAATGTTCCTTTAATGGTTGCTCGAATATTCCCTGCAGTTTT
GAGTGACGTAGCCGCTATTTTTACTGGTGCTTTTACTAATGATTTCGTTT
TCCCCCCAGATATTACTGACCAAAATGCTGAGTCAGCATAATCCAATTTG
TTGGCGGTGTCCGGGTCTCCGTCAGGGTTGATCACGTGCTTTGGTATAAA
CATAAAACGATTGTTGTCCACGCCTTGTAATCCTTGACCAAATATGGGTT
TTCCAAACTTATCTACAGTACCGAGTTGTTTTCCGTTACGGTCCTTTCTG
TCCGGTCCAAATACATCTTCTGCTTTATTGTCCATCTTTTGATTGACGAT
ATTTCTAAATTGCTTGTTCTTCTTGTAAATTgtgtttaattttttaaatg
aaccACCATACATTTTGGCTGAAGCGCCAAGTACGCTTGATGTTGACAGT
AGGTTACCCATTTTGCAAATGATGAATATTATAAAAATTGGGATATATAT
GGGAGCTAAGTAGGTGACGCAAGTACCTAAGATGACGATATTACCGACCC
CGGCCCGTACCCGACTCGTTACCGGAACCCGTACGGTATTACAATAATTC
TATGAGATCTCATAGTATAATTGTAATACCGTACGGGTTCCGGtaacctt
ttcataaatcacgTCACGAACAACACTTATCTCGTTTTGAAATNAGATAA
CGAATaaaagaccttttcataaatcacgTCACGAACAACACTTACctcgt
tttgaaaatattgccatggtgattaactcccagtggTTTTATTAAAACTT
TTACTATTAAAACtattctattcataaaaaaatcatttcatgtgtcaagg
gacataatcaccatggtaattgtttggaCACGAGGCAAGTTATGTTAGTG
GAAAAACAttcaatgaattaaaaaaacgaaaaagttaaaattttattagA
TTGTTCATTTCGATATTTTGGATTAAATTTCTAATGCTTTATGATCACAA
GATTTCATAGGCACAAATTCTTACTTCGGTCTTTTTGTATCTTCCAAGGT
TTTGATCACCCAGTTTATCATATTTGTGGGTCAAAAGACTTTTGGCTAGT
TTCCAGGTTCCATTCGCTTCTAATTCATCCATTCTCTTTTGATATCCATA
ATCTCTCAAGTAATGATCTCGGGTGGAAAAGATAATGATGGAACCACGCC
CCTTCGCCGCCATTATCATTTCGTCAAAGAGTTTCTTGTCACAATTCCCT
TCAACCAAAACTCCACAACATACAACAAGCTGGAATCTGTTCCGAAGATA
TTTGGGAAATGTTTCCAGTTTTCCAAGCTAAAGCTCGATAGTCTGCTTGT
AGGATTCTTTAGCTTTTGCTTTGGCCATCATTTCAACGGAAGCATCAACA
CCAAAGATGTTCTTGAATCCTCCAACCTTCAAAAGTTGATCTCCTCCAAG
CCAAGTTCCACAGCCCATGTCCAGAACTTCAATCACCTCTTTTGTCGCTA
GATCCGGGATAAGCTCACACCAAAGACTTATAACCAAAACAAGACGTCTA
ACCATTGTTTCACCTTAGTTAGATCTCATCAGATAgcgtgttattgtttt
tctaataCAATAACTATATCTACAGGGTTTCCGCATAATTAGTGAACGAA
AACAATCAATTTTGCCGCGTcagcaataaaaacaattgttttgccgagtc
agcaaaaaaatcaatattactaatttctcagaattttcgtcgaaattttc
aaaatggctgaagcagaaaaactttgatttgaaaattagaAACTCTGACT
TCGTTCTAATCTGTGAAAATGTTTACTGGCAATCAAATCATCTTCGTAAC
AGAAAGATTGAAGTTTTATGATATGGGCTCCTCTCCTCAAGTGCTAAAGG
AAAACCGATAGCCTGATATATCAAACTGCCTTCATATCTAACAGTTTTGA
TCGTCAACACTTTAGGacacttttaaacttttgaggACGACCTGGCTGGC
CTACAGTACCAAAAGAAAGATGAGTTAAAGAACTAATATGTTGTAAATGT
TTTGAttatcatttatttatatgGCTGATCacttttctacttttctttGG
TGTTTGCAAAACTTGCAGATATATGActctaaaaaggctgatttcatAAA
TGGTGGAATGATTAACCCAATCTTATTCATACTCTTGACATTCAATTAAA
TTGATTGGAAACTTGAGaacatttttggtattttgaatgACATAGTACAT
ATATACAAGATGTTGATTGACTATTTTAATATACCTATATGTGTTAATAT
CGATATTGGAATGAAGAAATAATAATCGTGGTAGTAGACACTCAACTAGA
GGGAATCGTGATATTTTACGATGGACTTGGATGATATTTTTACatacaaa
catttttaaaactCTATTTCACTAAAACTATATCTACGATATAAAACTGT
ACTTTTGGGAACCTAATAAGCTTCCCCCTCCCCCGTCTGCCCCcgctaat
aaataaattctcctatctggcttattccaaacccccatttatttaggtac
ccaagagtagttAGAACCTTTTATGGAccttattttattaaaagttaatt
aattaaaatttttcttttaaacaaagataCTATCCAGTGTATAagttttt
ttattctaaaaattttcgataatcatattgttttgaaaagatagaaTCAA
TGTCTGGGTCAAAGGCTgataattgaattgaaaaattaaagaattttttt
tcactcaattttcaatattttgatccAAACTTTTGAGGAGATTctgacat
aaaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038930TCONS_00038930Clytia hemisphaericatranscript
TCONS_00038931TCONS_00038931Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001969supercontigsc0001969:19846..27300 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.76	0.74	0.61	0.73	1.3	1.17	3.14	4.07	2.78	3.03	2.27	1.48	0.88	0.78	0.9	1.16	1.34	1.03	0.68	1.32	5.45	5.15	13.09	19.37	19.84	11.97	6.45	4.72	26.5	18.5