XLOC_023392 (gene) - C. hemisphaerica

Overview
NameXLOC_023392
Unique NameXLOC_023392
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001965:8034..12349-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023392 ID=XLOC_023392|Name=XLOC_023392|organism=Clytia hemisphaerica|type=gene|length=4316bp|location=Sequence derived from alignment at sc0001965:8034..12349- (Clytia hemisphaerica)
GATTAAATTCGTTGATGAGAAGGAGATAATGAGCGGCAATGAAAAGTCTG CGAAAAGAAGTAGGACATCCGTAGAGAAAGAAGATTATTCTATCGTAAAA GTTTTGGATTCTAAAGAAATTGATGGTACTGTTTTTTGCGAGGTAAATTT CTTTTTCATGTATCAGTACTCACCTCACCTATCAGTTCTCTGATGGCAGA CAATGTGTCTTGAAAAAAGCACCCTTTTCTACCGCAGCTACGAGCCGTGT TACAAGATAAATAAAATGGGAGGGTGAGGCTTTCAATGGTTTAATTTATA TGTCTATGATGTAATTTAGGGGCAACAAATTATGGTAAAAAAAGGGGAAA TTGTTTATGTAGTTGGAGGGAGGGGGTTTACTTTTGATGTAATTCATTTT CAGATTTTTGGTAAAATGGGGCAACTCATTATAAAGCACTGAAAAGTATA AAACTAAAACGAATACACTATAAGGGGCTCTGATAACTGNTGTAGTTGGA GGGAGGGGGTTTACTTTTGATGTAATTCATTTTCAGATTTTTGGTAAAAT GGGGCAACTCATTATAAAGCACTGAAAAGAATAAAACTAAAACGAATACA CTATAAGGGGTTCTGATAACTTCAAAGCAAAAATGTTTCTACTTATGTAT AATGCAAAATTTTGTTAACATAAGTTAAATGTTTTATTAAACCCTTTAAG TGCCACGGTCATTTTTTTCATTTTAAAGAAAATTGCTAGTTCAAACTTTA AAGGCTTATATCTCGAGATCTAGAAGGAGTTAGAAGCTTGTTCGTAGCTC GTTGGATAGCTTATAGTCTCCTCCTTCGGCGCCGCCCGATTTAATTCGCT GGAGGACAGAATCATGTAAAGCAGGCCTAAATTTGGAGGTTCTTGCAAAC ATTTGCATTTTTTTGATTTTTTAGCTTAAAATCTCGCTGGAAAGACTCAC TTTTGATTTTTTTTTGCTTGATCATAAAGCCCAATCCAATTCCTACGATT TAGACCAAAAATAGCGATTTCCGACTCAAACTGAGCATTACAGGAGGGCT TCGCCCTCCTACATAGCCCATTTCTGATATATACGACATTGGAACTTAAA GGGTTAACATTAAATTACTATACTCTAATCTAGGTGTTATGGAACAATAG CTCTACTTCTTGGATTCGGGAAAGCTACTTACCGGTGATTATCAAAGAAT TAGAACACGCGAAAATAGAAACTGTGGAAGAAAACTTTCTTGGTCAAAAG AAGAAAATACAGATAATTTCCTTATCTCAACAAAGGTAAAATTGACTTAT CCTCTGACTTATCCCTGGAAGACATTACATAAAAGAAATGTATCCATTCG ATAAAATTTCACTTAGTCTTTCTGTCTAGTATGCACTGGCGAACTATTTT AGATTTCATATACTTTACAGTTTAGAGATCTGTCATGTAATTGAAATTGT GCGATTCATTTTATTTGAGGCAAGAAAGTTCTACCACGACTCCGAGAGAA ATAGATGAAGCGGACTGTTCAGCTTGTGGAGAAACGGCTGTAATTGGTGA AGAGAATGATGATGACGATGATGACGATGATGATATTGAGAGTACATGTA ACACAGATAAATCGAAACAAAAAGCAAAAAATACTAAAACCGCGGGTAAG ATAAATTGATGATATGTTGAATAAACCATGTATTTTTATTTGATTATCAT GGGGGCGGTATCGGTGTCAAAGTATCTATTTTTAAAGCTGATTGGGTGAT TTAAGTTTACCACAATACTAGAATTTGTACAACAGTTTTTTAAAGTTGGA CATTTCCAAGAAACAATTATCAAAAAAATCATTTTTTACAAAAAAGTATG GGTAGATTAAAACGGACCTCAAAGTCTATCCACGATAAGTGTGCACTCTT TTTTCTTTTAACTATAACTTTTGAAGGAACCCTTCAATCTTTATAAATTT TGTATCCTTGGAAAGATATTAGTGAGTGGAACAATTTGAAATTAAAAAAT ATTTTTAAAAATTTTTAAACTGAAGATGAAAATAAAGAAAAAAATAAAGA TCTTGTAGAAAAGTGTTATAACAATCATTTTCACTGAAGTAAATTCTTGA TCATCGAACGTCATCTCTGTGAAAAAATTTCTCAAAAATAATCATTTAGT CAAAAGATATCAAACAAAGTTATAAGCTGATTGACATCTATAAACGCTGT TTATTGCTGTTTTTTTGAGCCAATAACTTATTAACTTTGTATCATAACTT TATATTGAATAAATATTTTAGTGAAATTTCTTCACAATGATAACCTCCTA AAACCATAAGTGAGAATCGCCTATGACCATAACTGCAGGGAGGTAGGGAG GGAGGGATTTAAAAAACTTATTTCATCATGTCAGCTTTCAGTTATAGCGT CGACTTGAACAGGGAGTTGCGATGGCCATTATGAACATGACGTCACGAGG GCAAATTATGGGCAAGTAGAGTAGCGCTTATCAAATAAAAGGTTAAACCA CGATTTAACCTATGTTAAATCCAAATTTAACTTTCCATTTGCCTATGACC TAAACTAGGGGTAGAAACCAATCAAGTAGTCAGACGGCTGAGAAATAAGC GTGAGTCGATAGATATAAGTTTGGCGTGAAATTAAGGCTAATCCTCGAAT AATAAACTTTCCTTTTTTCAGGAATACTGGCTATAACAAGTCCATGTGGA ATAGTTTTGGATTTAAAAGAGCTTTATAACTGTGAGAGTAAACGGCAAGT GTATGGCTGTCTATCTGACTTTCTTTCGGAGCATAGCATGATAGGTTTGT TTGACATTTTTATGTTTTTTCCAGTAAAAAGACTTCCATTTCAAGGACCA AAAAAATTAGCCTATCTATCAAAGGTAATGAAACTAACCCCTGGGAAAGG ATTTTGAGGGTTCAAAATTTCGTTGAAGGCATTCAATGTTTTTAAAAATG CAAATCTACATCTTTCAGGTCTGATTCAAATTTCACCTACATTCTCGGGG TCAGGTGCTGTAGATTATTGACAATAGATTTTAACTCAAAGTATCCTTGA AAGTGAATAATCCTCTTCCCATTATACATTACTTTAGAAACGATTGTTTA CGATGATGCATGTCATTTGAAGCCTTTCGCCACCAACAAAATTAGGAAAG ATCTTACACCATTGAGTAAAAGAATTGCTGGAATGGATTTTGCAGTTGAT CGTTTTCATTTCAAAAACCACATTGGAGAATGGTGTCTTGAAAACTGCGA CCCTGATATGGTTGCAAATTTAAACGAGGTATATACAGATTTTTATTTTC TTAACTTGAGTATCAAGCCCCCTTAAAGTGGAAATTGAATTGTTAGAGAG ATAACATCATCAACATAACTATTTAAGAACTTCGCAGAGATATCATTGAG ATTAATGTGAAACCCTGACCAAGTCACAGTCATTATTATAACACAGTTAA TAATACCAAGCTCACGATATTACTAAAAAATGATGTACAGTGAAACCTCC AATTAGCGGACACCATCGGGGAGTAAGCAAAGTGTCCATTAATTTGAGGT GTCCGCTTTTTGGAGACCGTTTTAGTGGCGTTTGTTAAAAAAGGGGGAAT AGGTTGTGTTTGCTATTTAGACAGTGTCCGCTTTTTTGAGTCTCCGTTAA TTAGAGGTTTCACTGTATATATACCGGGTATGCATAAAAAAGAAGTTAAG CACAAATTTCAAGTTTTTACATGCGCTACTCTCTTCAGGGAAATAATCTC AAATTTTTTAACAATTATTGCTGATTTGACCTTTTTATAATACTGCTGAA AATTTTATTTAAGCCAATTTGTAATTTTTTATGCACATCCGGTAATAGGG TTTAATTTCTTTACATTTAGGTCAACACCGAGAGCTGCGAACAGTTATTC AGCTGGTTTTCATCGTTTAAGCACATGACCAAACACATGAAGCGCGAGAC CTTCATATTTCTTACGTTGTATTTGATGGAAAGTCAAAATCAGTTGACAG AAGAAAAGCTAAGAAAACGCAAAGAACTAATTCTCCCGAATCAAGATATA GGGATGAACTGAATAAAAAAATTACTGTGTTACTTCGAATAAACGCCTGT GTTACTTCGAATAAACGCCCTCTTCTTTTAAACAATATCCTCGAATAAAC GCCCCTCCTTTCACAAAACATTTTTATTGAACGTCCCCTCAAATAAACGG CCCCTTCAAATAACCGCTTCTCCTATAGGAGAAAACACTCAAATATTATT ATACATGCACTCAAATACTAAAAAAGGCAAATAAGTTTCCAATTTACAAA TAATTTAATAAACGCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038926TCONS_00038926Clytia hemisphaericatranscript
TCONS_00038925TCONS_00038925Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038926-proteinTCONS_00038926-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001965supercontigsc0001965:8034..12349 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.18 0.24 0.14 0.04 0 0 0 0.04 0 0 0 0.12 0.07 0.02 0.55 0.7 0.09 0.24 0.04 0.2 0.3 0.15 0.21 0.18 0 0 0.17 0 0.07 0.24