TCONS_00038926 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038926
Unique NameTCONS_00038926
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1230

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038926 ID=TCONS_00038926|Name=TCONS_00038926|organism=Clytia hemisphaerica|type=transcript|length=1230bp
GATTAAATTCGTTGATGAGAAGGAGATAATGAGCGGCAATGAAAAGTCTG
CGAAAAGAAGTAGGACATCCGTAGAGAAAGAAGATTATTCTATCGTAAAA
GTTTTGGATTCTAAAGAAATTGATGGTACTGTTTTTTGCGagGTGTTATG
GAACAATAGCTCTACTTCTTGGATTCGGGAAAGCTACTTACCGGTGATTA
TCAAAGAATTAGAACACGCGAAAATAGAAACTGTGGAAGAAAACTTTCTT
ggtcaaaagaagaaaatacaGATAATTTCCTTATCTCAACAAAGGCAAGA
AAGTTCTACCACGACTCCGAGAGAAATAGATGAAGCGGACTGTTCAGCTT
GTGGAGAAACGGCTGTAATTGGTGAAGAGaatgatgatgacgatgatgac
gatgatgatatTGAGAGTACATGTAACACAGATAAATCgaaacaaaaagc
aaaaaatactAAAACCGCGGGAATACTGGCTATAACAAGTCCATGTGGAA
TAGTTTTGGATTTAAAAGAGCTTTATAACTGTGAGAGTAAACGGCAAGTG
TATGGCTGTCTATCTGACTTTCTTTCGGAGCATAGCATGATAGAAACGAT
TGTTTACGATGATGCATGTCATTTGAAGCCTTTCGCCACCAACAAAATTA
GGAAAGATCTTACACCATTGAGTAAAAGAATTGCTGGAATGGATTTTGCA
GTTGAtcgttttcatttcaaaaaccaCATTGGAGAATGGTGTCTTGAAAA
CTGCGACCCTGATATGGTTGCAAATTTAAACGAGGTCAACACCGAGAGCT
GCGAACAGTTATTCAGCTGGTTTTCATCGTTTAAGCACATGACCAAACAC
ATGAAGCGCGAGACCTTCATATTTCTTACGTTGTATTTGATGGAAAGTCA
AAATCAGTTGACAGAAGAAAAGCTAAGAAAACGCAAAGAACTAATTCTCC
CGAATCAAGATATAGGGAtgaactgaataaaaaaattactgtgttacttc
gaataaacgcctgtgttacttcgaataaacgccctctTCTTTTAAACAAT
atcctcgaataaacgcccctcctttcacaaaacatttttattgaaCGTCC
CCTCAAATAAACGGCCCCTTCAAATAACCGCTTCTCCTATAGGAGAAAAC
ACTCAAATATTATTATACATGCACTCAAATACTAAAAAAGGCAAATAAGT
TTCCAATTtacaaataatttaataaacgcc
Run BLAST on NCBI

protein sequence of TCONS_00038926-protein

>TCONS_00038926-protein ID=TCONS_00038926-protein|Name=TCONS_00038926-protein|organism=Clytia hemisphaerica|type=polypeptide|length=324bp
IKFVDEKEIMSGNEKSAKRSRTSVEKEDYSIVKVLDSKEIDGTVFCEVLW
NNSSTSWIRESYLPVIIKELEHAKIETVEENFLGQKKKIQIISLSQQRQE
SSTTTPREIDEADCSACGETAVIGEENDDDDDDDDDIESTCNTDKSKQKA
KNTKTAGILAITSPCGIVLDLKELYNCESKRQVYGCLSDFLSEHSMIETI
VYDDACHLKPFATNKIRKDLTPLSKRIAGMDFAVDRFHFKNHIGEWCLEN
CDPDMVANLNEVNTESCEQLFSWFSSFKHMTKHMKRETFIFLTLYLMESQ
NQLTEEKLRKRKELILPNQDIGMN
Run BLAST on NCBI

transcript from alignment at sc0001965:8034..12349-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038926 ID=TCONS_00038926|Name=TCONS_00038926|organism=Clytia hemisphaerica|type=transcript|length=4316bp|location=Sequence derived from alignment at sc0001965:8034..12349- (Clytia hemisphaerica)
GATTAAATTCGTTGATGAGAAGGAGATAATGAGCGGCAATGAAAAGTCTG
CGAAAAGAAGTAGGACATCCGTAGAGAAAGAAGATTATTCTATCGTAAAA
GTTTTGGATTCTAAAGAAATTGATGGTACTGTTTTTTGCGAGGTAAATTT
CTTTTTCATGTATCAGTACTCACCTCACCTATCAGTTCTCTGATGGCAGA
CAATGTGTCTTGAAAAAAGCACCCTTTTCTACCGCAGCTACGAGCCGTGT
TACAAGATAAATAAAATGGGAGGGTGAGGCTTTCAATGGTTTAATTTATA
TGTCTATGATGTAATTTAGGGGCAACAAATTATGGTAAAAAAAGGGGAAA
TTGTTTATGTAGTTGGAGGGAGGGGGTTTACTTTTGATGTAATTCATTTT
CAGATTTTTGGTAAAATGGGGCAACTCATTATAAAGCACTGAAAAGTATA
AAACTAAAACGAATACACTATAAGGGGCTCTGATAACTGNTGTAGTTGGA
GGGAGGGGGTTTACTTTTGATGTAATTCATTTTCAGATTTTTGGTAAAAT
GGGGCAACTCATTATAAAGCACTGAAAAGAATAAAACTAAAACGAATACA
CTATAAGGGGTTCTGATAACTTCAAAGCAAAAATGTTTCTACTTATGTAT
AATGCAAAATTTTGTTAACATAAGTTAAATGTTTTATTAAACCCTTTAAG
TGCCACGGTCATTTTTTTCATTTTAAAGAAAATTGCTAGTTCAAACTTTA
AAGGCTTATATCTCGAGATCTAGAAGGAGTTAGAAGCTTGTTCGTAGCTC
GTTGGATAGCTTATAGTCTCCTCCTTCGGCGCCGCCCGATTTAATTCGCT
GGAGGACAGAATCATGTAAAGCAGGCCTAAATTTGGAGGTTCTTGCAAAC
ATTTGCATTTTTTTGATTTTTTAGCTTAAAATCTCGCTGGAAAGACTCAC
TTTTGATTTTTTTTTGCTTGATCATAAAGCCCAATCCAATTCCTACGATT
TAGACCAAAAATAGCGATTTCCGACTCAAACTGAGCATTACAGGAGGGCT
TCGCCCTCCTACATAGCCCATTTCTGATATATACGACATTGGAACTTAAA
GGGTTAACATTAAATTACTATACTCTAATCTAGGTGTTATGGAACAATAG
CTCTACTTCTTGGATTCGGGAAAGCTACTTACCGGTGATTATCAAAGAAT
TAGAACACGCGAAAATAGAAACTGTGGAAGAAAACTTTCTTGGTCAAAAG
AAGAAAATACAGATAATTTCCTTATCTCAACAAAGGTAAAATTGACTTAT
CCTCTGACTTATCCCTGGAAGACATTACATAAAAGAAATGTATCCATTCG
ATAAAATTTCACTTAGTCTTTCTGTCTAGTATGCACTGGCGAACTATTTT
AGATTTCATATACTTTACAGTTTAGAGATCTGTCATGTAATTGAAATTGT
GCGATTCATTTTATTTGAGGCAAGAAAGTTCTACCACGACTCCGAGAGAA
ATAGATGAAGCGGACTGTTCAGCTTGTGGAGAAACGGCTGTAATTGGTGA
AGAGAATGATGATGACGATGATGACGATGATGATATTGAGAGTACATGTA
ACACAGATAAATCGAAACAAAAAGCAAAAAATACTAAAACCGCGGGTAAG
ATAAATTGATGATATGTTGAATAAACCATGTATTTTTATTTGATTATCAT
GGGGGCGGTATCGGTGTCAAAGTATCTATTTTTAAAGCTGATTGGGTGAT
TTAAGTTTACCACAATACTAGAATTTGTACAACAGTTTTTTAAAGTTGGA
CATTTCCAAGAAACAATTATCAAAAAAATCATTTTTTACAAAAAAGTATG
GGTAGATTAAAACGGACCTCAAAGTCTATCCACGATAAGTGTGCACTCTT
TTTTCTTTTAACTATAACTTTTGAAGGAACCCTTCAATCTTTATAAATTT
TGTATCCTTGGAAAGATATTAGTGAGTGGAACAATTTGAAATTAAAAAAT
ATTTTTAAAAATTTTTAAACTGAAGATGAAAATAAAGAAAAAAATAAAGA
TCTTGTAGAAAAGTGTTATAACAATCATTTTCACTGAAGTAAATTCTTGA
TCATCGAACGTCATCTCTGTGAAAAAATTTCTCAAAAATAATCATTTAGT
CAAAAGATATCAAACAAAGTTATAAGCTGATTGACATCTATAAACGCTGT
TTATTGCTGTTTTTTTGAGCCAATAACTTATTAACTTTGTATCATAACTT
TATATTGAATAAATATTTTAGTGAAATTTCTTCACAATGATAACCTCCTA
AAACCATAAGTGAGAATCGCCTATGACCATAACTGCAGGGAGGTAGGGAG
GGAGGGATTTAAAAAACTTATTTCATCATGTCAGCTTTCAGTTATAGCGT
CGACTTGAACAGGGAGTTGCGATGGCCATTATGAACATGACGTCACGAGG
GCAAATTATGGGCAAGTAGAGTAGCGCTTATCAAATAAAAGGTTAAACCA
CGATTTAACCTATGTTAAATCCAAATTTAACTTTCCATTTGCCTATGACC
TAAACTAGGGGTAGAAACCAATCAAGTAGTCAGACGGCTGAGAAATAAGC
GTGAGTCGATAGATATAAGTTTGGCGTGAAATTAAGGCTAATCCTCGAAT
AATAAACTTTCCTTTTTTCAGGAATACTGGCTATAACAAGTCCATGTGGA
ATAGTTTTGGATTTAAAAGAGCTTTATAACTGTGAGAGTAAACGGCAAGT
GTATGGCTGTCTATCTGACTTTCTTTCGGAGCATAGCATGATAGGTTTGT
TTGACATTTTTATGTTTTTTCCAGTAAAAAGACTTCCATTTCAAGGACCA
AAAAAATTAGCCTATCTATCAAAGGTAATGAAACTAACCCCTGGGAAAGG
ATTTTGAGGGTTCAAAATTTCGTTGAAGGCATTCAATGTTTTTAAAAATG
CAAATCTACATCTTTCAGGTCTGATTCAAATTTCACCTACATTCTCGGGG
TCAGGTGCTGTAGATTATTGACAATAGATTTTAACTCAAAGTATCCTTGA
AAGTGAATAATCCTCTTCCCATTATACATTACTTTAGAAACGATTGTTTA
CGATGATGCATGTCATTTGAAGCCTTTCGCCACCAACAAAATTAGGAAAG
ATCTTACACCATTGAGTAAAAGAATTGCTGGAATGGATTTTGCAGTTGAT
CGTTTTCATTTCAAAAACCACATTGGAGAATGGTGTCTTGAAAACTGCGA
CCCTGATATGGTTGCAAATTTAAACGAGGTATATACAGATTTTTATTTTC
TTAACTTGAGTATCAAGCCCCCTTAAAGTGGAAATTGAATTGTTAGAGAG
ATAACATCATCAACATAACTATTTAAGAACTTCGCAGAGATATCATTGAG
ATTAATGTGAAACCCTGACCAAGTCACAGTCATTATTATAACACAGTTAA
TAATACCAAGCTCACGATATTACTAAAAAATGATGTACAGTGAAACCTCC
AATTAGCGGACACCATCGGGGAGTAAGCAAAGTGTCCATTAATTTGAGGT
GTCCGCTTTTTGGAGACCGTTTTAGTGGCGTTTGTTAAAAAAGGGGGAAT
AGGTTGTGTTTGCTATTTAGACAGTGTCCGCTTTTTTGAGTCTCCGTTAA
TTAGAGGTTTCACTGTATATATACCGGGTATGCATAAAAAAGAAGTTAAG
CACAAATTTCAAGTTTTTACATGCGCTACTCTCTTCAGGGAAATAATCTC
AAATTTTTTAACAATTATTGCTGATTTGACCTTTTTATAATACTGCTGAA
AATTTTATTTAAGCCAATTTGTAATTTTTTATGCACATCCGGTAATAGGG
TTTAATTTCTTTACATTTAGGTCAACACCGAGAGCTGCGAACAGTTATTC
AGCTGGTTTTCATCGTTTAAGCACATGACCAAACACATGAAGCGCGAGAC
CTTCATATTTCTTACGTTGTATTTGATGGAAAGTCAAAATCAGTTGACAG
AAGAAAAGCTAAGAAAACGCAAAGAACTAATTCTCCCGAATCAAGATATA
GGGATGAACTGAATAAAAAAATTACTGTGTTACTTCGAATAAACGCCTGT
GTTACTTCGAATAAACGCCCTCTTCTTTTAAACAATATCCTCGAATAAAC
GCCCCTCCTTTCACAAAACATTTTTATTGAACGTCCCCTCAAATAAACGG
CCCCTTCAAATAACCGCTTCTCCTATAGGAGAAAACACTCAAATATTATT
ATACATGCACTCAAATACTAAAAAAGGCAAATAAGTTTCCAATTTACAAA
TAATTTAATAAACGCC

Coding sequence (CDS) from alignment at sc0001965:8034..12349-

>TCONS_00038926 ID=TCONS_00038926|Name=TCONS_00038926|organism=Clytia hemisphaerica|type=CDS|length=5850bp|location=Sequence derived from alignment at sc0001965:8034..12349- (Clytia hemisphaerica)
GTCAACACCGAGAGCTGCGAACAGTTATTCAGCTGGTTTTCATCGTTTAA
GCACATGACCAAACACATGAAGCGCGAGACCTTCATATTTCTTACGTTGT
ATTTGATGGAAAGTCAAAATCAGTTGACAGAAGAAAAGCTAAGAAAACGC
AAAGAACTAATTCTCCCGAATCAAGATATAGGGATGAACTGAAAACGATT
GTTTACGATGATGCATGTCATTTGAAGCCTTTCGCCACCAACAAAATTAG
GAAAGATCTTACACCATTGAGTAAAAGAATTGCTGGAATGGATTTTGCAG
TTGATCGTTTTCATTTCAAAAACCACATTGGAGAATGGTGTCTTGAAAAC
TGCGACCCTGATATGGTTGCAAATTTAAACGAGGAATACTGGCTATAACA
AGTCCATGTGGAATAGTTTTGGATTTAAAAGAGCTTTATAACTGTGAGAG
TAAACGGCAAGTGTATGGCTGTCTATCTGACTTTCTTTCGGAGCATAGCA
TGATAGGCAAGAAAGTTCTACCACGACTCCGAGAGAAATAGATGAAGCGG
ACTGTTCAGCTTGTGGAGAAACGGCTGTAATTGGTGAAGAGAATGATGAT
GACGATGATGACGATGATGATATTGAGAGTACATGTAACACAGATAAATC
GAAACAAAAAGCAAAAAATACTAAAACCGCGGGTGTTATGGAACAATAGC
TCTACTTCTTGGATTCGGGAAAGCTACTTACCGGTGATTATCAAAGAATT
AGAACACGCGAAAATAGAAACTGTGGAAGAAAACTTTCTTGGTCAAAAGA
AGAAAATACAGATAATTTCCTTATCTCAACAAAGATTAAATTCGTTGATG
AGAAGGAGATAATGAGCGGCAATGAAAAGTCTGCGAAAAGAAGTAGGACA
TCCGTAGAGAAAGAAGATTATTCTATCGTAAAAGTTTTGGATTCTAAAGA
AATTGATGGTACTGTTTTTTGCGAGGTCAACACCGAGAGCTGCGAACAGT
TATTCAGCTGGTTTTCATCGTTTAAGCACATGACCAAACACATGAAGCGC
GAGACCTTCATATTTCTTACGTTGTATTTGATGGAAAGTCAAAATCAGTT
GACAGAAGAAAAGCTAAGAAAACGCAAAGAACTAATTCTCCCGAATCAAG
ATATAGGGATGAACTGAAAACGATTGTTTACGATGATGCATGTCATTTGA
AGCCTTTCGCCACCAACAAAATTAGGAAAGATCTTACACCATTGAGTAAA
AGAATTGCTGGAATGGATTTTGCAGTTGATCGTTTTCATTTCAAAAACCA
CATTGGAGAATGGTGTCTTGAAAACTGCGACCCTGATATGGTTGCAAATT
TAAACGAGGAATACTGGCTATAACAAGTCCATGTGGAATAGTTTTGGATT
TAAAAGAGCTTTATAACTGTGAGAGTAAACGGCAAGTGTATGGCTGTCTA
TCTGACTTTCTTTCGGAGCATAGCATGATAGGCAAGAAAGTTCTACCACG
ACTCCGAGAGAAATAGATGAAGCGGACTGTTCAGCTTGTGGAGAAACGGC
TGTAATTGGTGAAGAGAATGATGATGACGATGATGACGATGATGATATTG
AGAGTACATGTAACACAGATAAATCGAAACAAAAAGCAAAAAATACTAAA
ACCGCGGGTGTTATGGAACAATAGCTCTACTTCTTGGATTCGGGAAAGCT
ACTTACCGGTGATTATCAAAGAATTAGAACACGCGAAAATAGAAACTGTG
GAAGAAAACTTTCTTGGTCAAAAGAAGAAAATACAGATAATTTCCTTATC
TCAACAAAGATTAAATTCGTTGATGAGAAGGAGATAATGAGCGGCAATGA
AAAGTCTGCGAAAAGAAGTAGGACATCCGTAGAGAAAGAAGATTATTCTA
TCGTAAAAGTTTTGGATTCTAAAGAAATTGATGGTACTGTTTTTTGCGAG
GTCAACACCGAGAGCTGCGAACAGTTATTCAGCTGGTTTTCATCGTTTAA
GCACATGACCAAACACATGAAGCGCGAGACCTTCATATTTCTTACGTTGT
ATTTGATGGAAAGTCAAAATCAGTTGACAGAAGAAAAGCTAAGAAAACGC
AAAGAACTAATTCTCCCGAATCAAGATATAGGGATGAACTGAAAACGATT
GTTTACGATGATGCATGTCATTTGAAGCCTTTCGCCACCAACAAAATTAG
GAAAGATCTTACACCATTGAGTAAAAGAATTGCTGGAATGGATTTTGCAG
TTGATCGTTTTCATTTCAAAAACCACATTGGAGAATGGTGTCTTGAAAAC
TGCGACCCTGATATGGTTGCAAATTTAAACGAGGAATACTGGCTATAACA
AGTCCATGTGGAATAGTTTTGGATTTAAAAGAGCTTTATAACTGTGAGAG
TAAACGGCAAGTGTATGGCTGTCTATCTGACTTTCTTTCGGAGCATAGCA
TGATAGGCAAGAAAGTTCTACCACGACTCCGAGAGAAATAGATGAAGCGG
ACTGTTCAGCTTGTGGAGAAACGGCTGTAATTGGTGAAGAGAATGATGAT
GACGATGATGACGATGATGATATTGAGAGTACATGTAACACAGATAAATC
GAAACAAAAAGCAAAAAATACTAAAACCGCGGGTGTTATGGAACAATAGC
TCTACTTCTTGGATTCGGGAAAGCTACTTACCGGTGATTATCAAAGAATT
AGAACACGCGAAAATAGAAACTGTGGAAGAAAACTTTCTTGGTCAAAAGA
AGAAAATACAGATAATTTCCTTATCTCAACAAAGATTAAATTCGTTGATG
AGAAGGAGATAATGAGCGGCAATGAAAAGTCTGCGAAAAGAAGTAGGACA
TCCGTAGAGAAAGAAGATTATTCTATCGTAAAAGTTTTGGATTCTAAAGA
AATTGATGGTACTGTTTTTTGCGAGGTCAACACCGAGAGCTGCGAACAGT
TATTCAGCTGGTTTTCATCGTTTAAGCACATGACCAAACACATGAAGCGC
GAGACCTTCATATTTCTTACGTTGTATTTGATGGAAAGTCAAAATCAGTT
GACAGAAGAAAAGCTAAGAAAACGCAAAGAACTAATTCTCCCGAATCAAG
ATATAGGGATGAACTGAAAACGATTGTTTACGATGATGCATGTCATTTGA
AGCCTTTCGCCACCAACAAAATTAGGAAAGATCTTACACCATTGAGTAAA
AGAATTGCTGGAATGGATTTTGCAGTTGATCGTTTTCATTTCAAAAACCA
CATTGGAGAATGGTGTCTTGAAAACTGCGACCCTGATATGGTTGCAAATT
TAAACGAGGAATACTGGCTATAACAAGTCCATGTGGAATAGTTTTGGATT
TAAAAGAGCTTTATAACTGTGAGAGTAAACGGCAAGTGTATGGCTGTCTA
TCTGACTTTCTTTCGGAGCATAGCATGATAGGCAAGAAAGTTCTACCACG
ACTCCGAGAGAAATAGATGAAGCGGACTGTTCAGCTTGTGGAGAAACGGC
TGTAATTGGTGAAGAGAATGATGATGACGATGATGACGATGATGATATTG
AGAGTACATGTAACACAGATAAATCGAAACAAAAAGCAAAAAATACTAAA
ACCGCGGGTGTTATGGAACAATAGCTCTACTTCTTGGATTCGGGAAAGCT
ACTTACCGGTGATTATCAAAGAATTAGAACACGCGAAAATAGAAACTGTG
GAAGAAAACTTTCTTGGTCAAAAGAAGAAAATACAGATAATTTCCTTATC
TCAACAAAGATTAAATTCGTTGATGAGAAGGAGATAATGAGCGGCAATGA
AAAGTCTGCGAAAAGAAGTAGGACATCCGTAGAGAAAGAAGATTATTCTA
TCGTAAAAGTTTTGGATTCTAAAGAAATTGATGGTACTGTTTTTTGCGAG
GTCAACACCGAGAGCTGCGAACAGTTATTCAGCTGGTTTTCATCGTTTAA
GCACATGACCAAACACATGAAGCGCGAGACCTTCATATTTCTTACGTTGT
ATTTGATGGAAAGTCAAAATCAGTTGACAGAAGAAAAGCTAAGAAAACGC
AAAGAACTAATTCTCCCGAATCAAGATATAGGGATGAACTGAAAACGATT
GTTTACGATGATGCATGTCATTTGAAGCCTTTCGCCACCAACAAAATTAG
GAAAGATCTTACACCATTGAGTAAAAGAATTGCTGGAATGGATTTTGCAG
TTGATCGTTTTCATTTCAAAAACCACATTGGAGAATGGTGTCTTGAAAAC
TGCGACCCTGATATGGTTGCAAATTTAAACGAGGAATACTGGCTATAACA
AGTCCATGTGGAATAGTTTTGGATTTAAAAGAGCTTTATAACTGTGAGAG
TAAACGGCAAGTGTATGGCTGTCTATCTGACTTTCTTTCGGAGCATAGCA
TGATAGGCAAGAAAGTTCTACCACGACTCCGAGAGAAATAGATGAAGCGG
ACTGTTCAGCTTGTGGAGAAACGGCTGTAATTGGTGAAGAGAATGATGAT
GACGATGATGACGATGATGATATTGAGAGTACATGTAACACAGATAAATC
GAAACAAAAAGCAAAAAATACTAAAACCGCGGGTGTTATGGAACAATAGC
TCTACTTCTTGGATTCGGGAAAGCTACTTACCGGTGATTATCAAAGAATT
AGAACACGCGAAAATAGAAACTGTGGAAGAAAACTTTCTTGGTCAAAAGA
AGAAAATACAGATAATTTCCTTATCTCAACAAAGATTAAATTCGTTGATG
AGAAGGAGATAATGAGCGGCAATGAAAAGTCTGCGAAAAGAAGTAGGACA
TCCGTAGAGAAAGAAGATTATTCTATCGTAAAAGTTTTGGATTCTAAAGA
AATTGATGGTACTGTTTTTTGCGAGGTCAACACCGAGAGCTGCGAACAGT
TATTCAGCTGGTTTTCATCGTTTAAGCACATGACCAAACACATGAAGCGC
GAGACCTTCATATTTCTTACGTTGTATTTGATGGAAAGTCAAAATCAGTT
GACAGAAGAAAAGCTAAGAAAACGCAAAGAACTAATTCTCCCGAATCAAG
ATATAGGGATGAACTGAAAACGATTGTTTACGATGATGCATGTCATTTGA
AGCCTTTCGCCACCAACAAAATTAGGAAAGATCTTACACCATTGAGTAAA
AGAATTGCTGGAATGGATTTTGCAGTTGATCGTTTTCATTTCAAAAACCA
CATTGGAGAATGGTGTCTTGAAAACTGCGACCCTGATATGGTTGCAAATT
TAAACGAGGAATACTGGCTATAACAAGTCCATGTGGAATAGTTTTGGATT
TAAAAGAGCTTTATAACTGTGAGAGTAAACGGCAAGTGTATGGCTGTCTA
TCTGACTTTCTTTCGGAGCATAGCATGATAGGCAAGAAAGTTCTACCACG
ACTCCGAGAGAAATAGATGAAGCGGACTGTTCAGCTTGTGGAGAAACGGC
TGTAATTGGTGAAGAGAATGATGATGACGATGATGACGATGATGATATTG
AGAGTACATGTAACACAGATAAATCGAAACAAAAAGCAAAAAATACTAAA
ACCGCGGGTGTTATGGAACAATAGCTCTACTTCTTGGATTCGGGAAAGCT
ACTTACCGGTGATTATCAAAGAATTAGAACACGCGAAAATAGAAACTGTG
GAAGAAAACTTTCTTGGTCAAAAGAAGAAAATACAGATAATTTCCTTATC
TCAACAAAGATTAAATTCGTTGATGAGAAGGAGATAATGAGCGGCAATGA
AAAGTCTGCGAAAAGAAGTAGGACATCCGTAGAGAAAGAAGATTATTCTA
TCGTAAAAGTTTTGGATTCTAAAGAAATTGATGGTACTGTTTTTTGCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023392XLOC_023392Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038926-proteinTCONS_00038926-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038926-exon-sc0001965-1575043694:12208..12349TCONS_00038926-exon-sc0001965-1575043694:12208..12349Clytia hemisphaericaexon
TCONS_00038926-exon-sc0001965-1575043694:11065..11216TCONS_00038926-exon-sc0001965-1575043694:11065..11216Clytia hemisphaericaexon
TCONS_00038926-exon-sc0001965-1575043694:10705..10880TCONS_00038926-exon-sc0001965-1575043694:10705..10880Clytia hemisphaericaexon
TCONS_00038926-exon-sc0001965-1575043694:9556..9678TCONS_00038926-exon-sc0001965-1575043694:9556..9678Clytia hemisphaericaexon
TCONS_00038926-exon-sc0001965-1575043694:9072..9262TCONS_00038926-exon-sc0001965-1575043694:9072..9262Clytia hemisphaericaexon
TCONS_00038926-exon-sc0001965-1575043694:8034..8479TCONS_00038926-exon-sc0001965-1575043694:8034..8479Clytia hemisphaericaexon
TCONS_00038926-exon-sc0001965-1510915933:12208..12349TCONS_00038926-exon-sc0001965-1510915933:12208..12349Clytia hemisphaericaexon
TCONS_00038926-exon-sc0001965-1510915933:11065..11216TCONS_00038926-exon-sc0001965-1510915933:11065..11216Clytia hemisphaericaexon
TCONS_00038926-exon-sc0001965-1510915933:10705..10880TCONS_00038926-exon-sc0001965-1510915933:10705..10880Clytia hemisphaericaexon
TCONS_00038926-exon-sc0001965-1510915933:9556..9678TCONS_00038926-exon-sc0001965-1510915933:9556..9678Clytia hemisphaericaexon
TCONS_00038926-exon-sc0001965-1510915933:9072..9262TCONS_00038926-exon-sc0001965-1510915933:9072..9262Clytia hemisphaericaexon
TCONS_00038926-exon-sc0001965-1510915933:8034..8479TCONS_00038926-exon-sc0001965-1510915933:8034..8479Clytia hemisphaericaexon
TCONS_00038926-exon-sc0001965-1491911889:12208..12349TCONS_00038926-exon-sc0001965-1491911889:12208..12349Clytia hemisphaericaexon
TCONS_00038926-exon-sc0001965-1491911889:11065..11216TCONS_00038926-exon-sc0001965-1491911889:11065..11216Clytia hemisphaericaexon
TCONS_00038926-exon-sc0001965-1491911889:10705..10880TCONS_00038926-exon-sc0001965-1491911889:10705..10880Clytia hemisphaericaexon
TCONS_00038926-exon-sc0001965-1491911889:9556..9678TCONS_00038926-exon-sc0001965-1491911889:9556..9678Clytia hemisphaericaexon
TCONS_00038926-exon-sc0001965-1491911889:9072..9262TCONS_00038926-exon-sc0001965-1491911889:9072..9262Clytia hemisphaericaexon
TCONS_00038926-exon-sc0001965-1491911889:8034..8479TCONS_00038926-exon-sc0001965-1491911889:8034..8479Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001965supercontigsc0001965:8034..12349 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0800852	0.237194	0	0.0384915	0	0	0	0.0418233	0	0	0	0.11571	0.0693295	0.0239998	0.55247	0.698758	0.0601197	0.184862	0.0369379	0.0890849	0.154862	0.147484	0	0.181108	0	0	0.109813	0	0	0.235766
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038926 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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