XLOC_023226 (gene) - C. hemisphaerica

Overview
NameXLOC_023226
Unique NameXLOC_023226
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001911:21346..27457+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023226 ID=XLOC_023226|Name=XLOC_023226|organism=Clytia hemisphaerica|type=gene|length=6112bp|location=Sequence derived from alignment at sc0001911:21346..27457+ (Clytia hemisphaerica)
GTCAGATTGGCTTTGACTGGGCTAGTGTGACAGACATTTTTCCAGAACTA TAAAGGTTCATCCTTATCAGAGCTCATTTCGTTTTGGTCAATCGAGAAAA AATGTTACCatcagtttgtttttatttacattttagcCTTTGAAGAAGAA TCTTCAgagagtgaaagtgaaagtgaagatGAAGAGGAAACTCCTGCAAA GAAACAAAAGCTTACTTTTGATGTTGATTGGGAAGATAATCTAAAGGTTA TCCCGAAACGTGACCTCCTGTGTGATATTACTTATCGATCAACAGGTTAG TTCCTATGCTTTAAAAAGTATCTATTCATTTACCTTATACCGTAGAAAAC CCTTAAAAGTATGGTCAGTGCTTAGAATTATGATATGCAATAGGTAGACA AACTTAGATTTTAAATACTTTAGGCTTCACAAAACGAACGATGAAGTGGG TCGAACAGAATAAACCCAGTTGGTGGCCACGTCGAATATTGTTTCGATCT CCTCATGGTAAAAGCAAAATTCCCGTGGCTGAAATGGACGATATCCTTCG ATCATTCCATGAGCATAAAGTCATTAAAGCTGTCGTAAGTTTTATTCCCG TTTTGTGGAAAACATCAATTTAACAATTTGGAGGATTGTATGTACGTCAA CTCTACGTCGATCTAGTAATTTCGTGATACATCCATAATTCGCATAGCTG CTTCAAATAAATAATCTTATATTGTTTTAGGAAAAACTGTGCTCTGATGA TGTAGACGTTTTCTTTCCAACTTTTTCCAAAATGGAAGAACATTTGAATT TATTCCTGAAGAAGGCTTCCATCATCACGGAGTGGTTGAAGAGAAATAGA AAAATCCAAAGAGTTGCAATGGCAGATATCGAATACAGGTGATCCTTTTA TCTAAGttcaatttcatttatttttttgtatttgtgTTTGAAAGCCGCTC TAAAGAAATGCTGCCGCGATAATTAGGGGACCCATGGTTTGGTGGTACTT CCATGGTGTACACTGAAAATTACTTTAAGTGACCTACGTGTAAAAGTNTT GAAACTTACTTTAAGTGACCTACGGgtaaaagttcaaaaacttGTCATGA TGATATTTGTTGCCCTGTTAGTAGCTCTATGCTCTTAGTAGCTTTTTACT AGTAAATATTCTATTTTGaataatataaaattttattttgtcacTAGATG CCGGTATCTAACAACAAAGTTTGGCACGAGAAAGGAGCCCATCCTCTTTG GGTCAATACATCGTTGAACGCCGCATtacgaaaaatttttcaaaattcta tcGTTGGCATATGCTGTAAcgagaaaaaatgatttaaataactatGTAAG AATTGAAATTTGAATCGATTTTTGATATGAATATAGATGAATATATGTAT ATATATCTACGTTTGTTATTATATGTTAATTATATTTCATTCTAAGGGAA CATCCGTCcttctttgaaaattattataaattttatCAATCTAGATTATG TATGTTTTTGGCTTTTATGCATTACCACTTTATTTCTAGATATGTGACGG AATAGATGATGTATCGCCGAAGAAGTTTCAGTCATGGCTTAACGTCAAAG ACATTAACAATTTGGAAGCATCACTTCTTACAAATGCATTTGAATGTAAC GGTAATAGTTATAAAATTTCTTAAGTTATGTGACTTTTCGTAATTTTCGC AATGTTGCGAAAGTCCAGTGGAGTTAGAACCCTCGTATTTTAATTTGTTT AAAGGGaatagcgctatacttatagtaggggtcggagttgctggtagttc catggtatactctgaaatacatgctgatgtcagcNAAAAATGTCGAAGTC ATAATATGTTTTGTTTCGATGATAGTGAAGAGGACGTCATTGTGTGCCCA AATTGCCTACTCACCTACCACAACACGTGTGTGCGTTGGAATGATGATTG TGGGTGTACTAAAATCCCTGAAATCAAATCGAGGTACAGTATAATCATCC ANAAAAACTCTTCATCGCATGAAAAGACAATTGATTTTTGATAGATGAAA GACtaactttttaaacaaaaagtttatatttaTTTCACTTCATAACACTG TGAGAAAGGGTTATGTAGGTGTAACCTGACTCTCTCTCCATCCGTATAAC AGAAAAGAGTTAGACTCTGAACCACTCTTTGTTTGTCTCGGAGAAACATA ATGAAAAAAATTAAAAAAATTTCCCCCCCCCCCCCCCATTTTATAAAGCT GACTTGTTCTGATGACTGATGACTGGGTTCCAATAAATCTTCATCTTGAT TCAATTCAATCGTAGGTATCAACTGATAAACTTATCTTTTGACTCGACTT GACAAAACAGAAACTTATTGAGACACGACTGTACCGTACGAAATTGACTG AACACAATATTGGTTTATGTCTTATTTATGCTCGCAAAATCCTAACAGGT TTCATTTATATTTTTTGTCAAAATTTTTACTCTTGAATCAGCCTTTTTTT ACAAATATTAACAAAGTCCAATTTCAAGTGTGTATTCTAACATTTCTGGC TATCTGTTCTTGATGAAAACCAACGCATCAACTTTTTTAAGTCTTGAAAT AATTTTCAATGAGAATAGAAATGTATTTAACGGTGATTTTTGTTACTTCT ATTCCAACTGTTATAGCAATGGTATCCTTGATTGGGCTGGTCGTAGGGCT CAATAAAAATCTGGCAGTTCAAGACGGTGAAAGCGTGTACCGACTGACAA GGCAAGAAGACATTCCATGCGACATTGCCATTTTATGCGGAAATGATCAA TACGTGTACATGGCTGATGTGGATGAATTTGACGAGACAAAATGTCGAAG TCATAATATGTTTTGTTTCGATGATAGTGAAGAGGACGTCATTGTGTGCC CAAATTGCCTCCTCACCTACCACAACACGTGTGTGCGTTGGAATGATGAT TGTGGGTGTACTAAAATCCCTGAAATCAAATCGAGGTACAGTATAATCAT CCAATAGAGGAAACTTAAAAAGGCAGATCTCTGATTAGGACGTAATGGTA TTTTCCGCTTGCTAGTCAAAACCTCATcagaaacttttcaaaataggTAC ACTTAATTAGATAAGGTTTCTACATGGAATTTTGTTGGTCAGAAGCATAC TTTTTCCTCTCAATTTATCATACACAACAGACATAAACTGgttaaaaaag gtcaaaaataagAGTGTTTTATCTTATTACAGTAGTTGACGCtcctaatt cgatcttcaagggaaattggaaaaaaaaatgaattaatttaCTTGAATCC TAAActagaaagttttaaaagtttatgCCCTTAAACTATCTACTTTCGTC TTAGAATAACTGCAATGCTGGATAATCAAGTTATCAATACCTTTATGTGT GAGATTTACAAAAGAACAAATCAACTCACGGTGAGATATTATATTACTAG TCCTACGCTATATACGCTTAACAATCGGGCTTTGTGGTTTCATATACTAT CAGTCGAATGTAAAACATGATCTTGGTCGCTCATGTTTACTTGATGcgga tttgaaatatttttttaaaaatagattaacttatttttcagaaaaaggca TCTAATATGTTAAATGGGCATCAAAAATCTGCAAGGAGTGAACTGATCCA TGTCAGGGTAACTGATGGCAGATGTGGAGTATTGACAAAGatgaatttgt tttcaaaaacaataccTGATCAAGTCGTAAGCGAAAACTATTTTACATTA TATACAGTGTACCCTTAAAAAGTGTAAtgatatattatatattattatgG TCATGGTTAGGAAGAGTATGGATTAGGTACATTTTGATTTTAGTCTGACT TTTGGTTAAAATCTACTTTCTTTTCTAACATAATGACACCGCATCGAAGT GCTCAACATGATGAGAAACAGCCATATTTTTGATAGGGAACTGGCAAATA ACTCTCTAGTTAGATTATTTAATAAGTCTCTAGTTAGAGAGAAGAAACTT TACCGAATTCGGCGGACTACCctaaaaatttcctaaattcGTCAAATTAA CTTTTATATCTAGATCATTGGCGAAACTTAattctaattatttttttaac acgGCTTTTTTCTCGATATATACAGGTGGTTTTAAATCATTTCCAGCCCC TGGACTTTNCAAGATCTTGAAGTGTGGTTTATATCCCTCAAAGCTCtaat caaaaagacaaaatacttTGATCTTTCACAgagttaaattattttttgag taATTTGTGTAAATTCAAGAAACACACCCCTATTAAACCTTCTCCTGAAT ATTGTAAACGGAACATTTGGCGACTCTTCTTTATCCATCACCTGAAAGCC ATAACAAATACCTAAAAGATACGCATTAGTTTTCATAGATTGTCTGTATT TACTTGTTTGCACCAAAACATTGAAACGACTACAATCAAGTTGTATCCAT ACATAATAACTTTTAAATGTGGTAGGCAAAATGATCATTTATAAAAAGAA TGGGAACACAAAAAATTTTACCGTGTGGGCAGTAGATAGTGAATATACCA GATGTCAAGTTTGGGTGACCTTTATAATTTTTGCGACAATTGCcgtattt tgtatttattgcATCCTGCTCGTAGCTGCCTCTCGGTCGCAAGGGTGGAA GATTTGGAAAGCTTAAATGGAATACGTAATAGTAATTTGCAATTTAATAA AAGCAAATGTAATCAGTCAATTAAGATCAGGGATTCCAAAGCTTTTGGTA AAGGTCACCACTAACTTAAATGGAAACCttataaaggaagaaatttaaga aactcTAAAGAATTCTTTGATTTACCTCAGTGTGAACATCTCCTTCTTTA AGGCGGGATCCCTTAACTCTTTTCCTCATAGAGTGGACAGGAGATTAGAG GTGggataaagtaaaaataaggGGATTGGTTTGAAGTATTTAGTTTAGAT CACAAAATGGCAAAATGTTTATCTGCGGCACCGCCATTTTACACCCATTT ACCATACAAATGTGAAAATAATTTGGTATAAAACAGTAAatctttaaaag atttttaaaataggGAACGTGCCTTTATTTTTGGGAAGGATGTTAAATGG GGTTACATATAATGTTAAACTTCAAAACAGATACTTTTACCTGCTGAGTT CATTCTCTTCGATAAAAGATCCACCGCTGTATACATCGGAGGCATAACGG TAAGGTATCCCAGTCTTGTCTGACAGGTAAAGTAGTAACCCTTTCCAGTG TTCTTCTGGGAGACATGTTTCCAAATTGCAATCAGTGAGGATGTTAAAAA GCAGAGGAAGCTTGAGTTGGAATTTCTTCATTAACGCAGCATCACTCTTA CACTTTGGTTCAAGCATCCTTAAACTCAAATTCAAATCGTTTTCGCCAAA GTAGGAACAGACTGGACTTGAAGAGTAAAggcacttgaaaaaaagtttga tcgATTTTGGCAGATCATCACCGAACGTGTCACGAGCCCACTTTAACGTA CGGAATATGACGGGGTAGATAATTTCAagctttttggaaaattccatCGA CGCATTCTTTTTGGTTACCCATTCCTTGAATGAGTCCCGTAAATCTTTGT CAGCGATAGCCAAGCGATCAGCATGTTTCCTAGCAGTATAGAGTGAGATT TATTTAGTATGAAGAAGCATAAAAAATAAGCTGATTCACTGATGCTTAAA AGCTTCAATTCATACAGTCacaaaacttttaacaaaactgtcgttttttt ataaaatgctGAGATACCGTAGTGCCATAGCAAATTCGGTAAAATCTAAA TAAACAAGAACTCACGAAAACTTTTGGGTACATAATTCGGATGGATTTTC CTGTAGCACCAGGGCCGAGAATTTCTTCTGATGACCCAAACTTGTTGCAT CACATATAATTGCAGCAGGATCTTGTTTGCAGATTTTACaaatcgatcct tcgttgaagTCGATGTCAAGTAGCTCCAAAAAGGAATACCACGAATCTTT GAAGTCTTTGTACGTCAGCTCGCATTTTTCGTGGCCAGAGCTTTTCTGAC TCAACGAGAAAACTTCGTAATAGCCATGAAGTGTACAACTAAAAATAAAG GTGTATGAAATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038693TCONS_00038693Clytia hemisphaericatranscript
TCONS_00038694TCONS_00038694Clytia hemisphaericatranscript
TCONS_00038695TCONS_00038695Clytia hemisphaericatranscript
TCONS_00038696TCONS_00038696Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038693-proteinTCONS_00038693-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001911supercontigsc0001911:21346..27457 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.72 0.77 0.33 0.12 4.56 3.72 4.48 5.7 3.65 3.78 4.09 3.72 2.86 2.96 2.24 2.53 3.28 2.65 1.76 1.64 2.8 2.46 1.35 2.07 1.65 3.27 2.91 1.57 2.48 1.81