TCONS_00038693 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038693
Unique NameTCONS_00038693
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3923

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038693 ID=TCONS_00038693|Name=TCONS_00038693|organism=Clytia hemisphaerica|type=transcript|length=3923bp
GTCAGATTGGCTTTGACTGGGCTAGTGTGACAGACATTTTTCCAGAACTA
TAAAGGTTCATCCTTATCAGAGCTCATTTCGTTTTGGTCAATCGAGAAAA
AATGTTACCatcagtttgtttttatttacattttagcCTTTGAAGAAGAA
TCTTCAgagagtgaaagtgaaagtgaagatGAAGAGGAAACTCCTGCAAA
GAAACAAAAGCTTACTTTTGATGTTGATTGGGAAGATAATCTAAAGGTTA
TCCCGAAACGTGACCTCCTGTGTGATATTACTTATCGATCAACAGGCTTC
ACAAAACGAACGATGAAGTGGGTCGAACAGAATAAACCCAGTTGGTGGCC
ACGTCGAATATTGTTTCGATCTCCTCATGGTAAAAGCAAAATTCCCGTGG
CTGAAATGGACGATATCCTTCGATCATTCCATGAGCATAAAGTCATTAAA
GCTGTCGAAAAACTGTGCTCTGATGATGTAGACGTTTTCTTTCCAACTTT
TTCCAAAATGGAAGAACATTTGAATTTATTCCTGAAGAAGGCTTCCATCA
TCACGGAGTGGTTGAAGAGAAATAGAAAAATCCAAAGAGTTGCAATGGCA
GATATCGAATACAGATGCCGGTATCTAACAACAAAGTTTGGCACGAGAAA
GGAGCCCATCCTCTTTGGGTCAATACATCGTTGAACGCCGCATtacgaaa
aatttttcaaaattctatcGTTGGCATATGCTGTAAcgagaaaaaatgat
ttaaataactatATATGTGACGGAATAGATGATGTATCGCCGAAGAAGTT
TCAGTCATGGCTTAACGTCAAAGACATTAACAATTTGGAAGCATCACTTC
TTACAAATGCATTTGAATGTAACGGTATCAACTGATAAACTTATCTTTTG
ACTCGACTTGACAAAACAGAAACTTATTGAGACACGACTGTACCGTACGA
AATTGACTGAACACAATATTGGTTTATGTCTTATTTATGCTCGCAAAATC
CTAACAGCAATGGTATCCTTGATTGGGCTGGTCGTAGGGCTCAATAAAAA
TCTGGCAGTTCAAGACGGTGAAAGCGTGTACCGACTGACAAGGCAAGAAG
ACATTCCATGCGACATTGCCATTTTATGCGGAAATGATCAATACGTGTAC
ATGGCTGATGTGGATGAATTTGACGAGACAAAATGTCGAAGTCATAATAT
GTTTTGTTTCGATGATAGTGAAGAGGACGTCATTGTGTGCCCAAATTGCC
TCCTCACCTACCACAACACGTGTGTGCGTTGGAATGATGATTGTGGGTGT
ACTAAAATCCCTGAAATCAAATCGAGAATAACTGCAATGCTGGATAATCA
AGTTATCAATACCTTTATGTGTGAGATTTACAAAAGAACAAATCAACTCA
CGaaaaaggcaTCTAATATGTTAAATGGGCATCAAAAATCTGCAAGGAGT
GAACTGATCCATGTCAGGGTAACTGATGGCAGATGTGGAGTATTGACAAA
GatgaatttgttttcaaaaacaataccTGATCAAGTCGTAAGCGAAAACT
ATTTTACATTATATACAGTGTACCCTTAAAAAGTGTAAtgatatattata
tattattatgGTCATGGTTAGGAAGAGTATGGATTAGGTACATTTTGATT
TTAGTCTGACTTTTGGTTAAAATCTACTTTCTTTTCTAACATAATGACAC
CGCATCGAAGTGCTCAACATGATGAGAAACAGCCATATTTTTGATAGGGA
ACTGGCAAATAACTCTCTAGTTAGATTATTTAATAAGTCTCTAGTTAGAG
AGAAGAAACTTTACCGAATTCGGCGGACTACCctaaaaatttcctaaatt
cGTCAAATTAACTTTTATATCTAGATCATTGGCGAAACTTAattctaatt
atttttttaacacgGCTTTTTTCTCGATATATACAGGTGGTTTTAAATCA
TTTCCAGCCCCTGGACTTTNCAAGATCTTGAAGTGTGGTTTATATCCCTC
AAAGCTCtaatcaaaaagacaaaatacttTGATCTTTCACAgagttaaat
tattttttgagtaATTTGTGTAAATTCAAGAAACACACCCCTATTAAACC
TTCTCCTGAATATTGTAAACGGAACATTTGGCGACTCTTCTTTATCCATC
ACCTGAAAGCCATAACAAATACCTAAAAGATACGCATTAGTTTTCATAGA
TTGTCTGTATTTACTTGTTTGCACCAAAACATTGAAACGACTACAATCAA
GTTGTATCCATACATAATAACTTTTAAATGTGGTAGGCAAAATGATCATT
TATAAAAAGAATGGGAACACAAAAAATTTTACCGTGTGGGCAGTAGATAG
TGAATATACCAGATGTCAAGTTTGGGTGACCTTTATAATTTTTGCGACAA
TTGCcgtattttgtatttattgcATCCTGCTCGTAGCTGCCTCTCGGTCG
CAAGGGTGGAAGATTTGGAAAGCTTAAATGGAATACGTAATAGTAATTTG
CAATTTAATAAAAGCAAATGTAATCAGTCAATTAAGATCAGGGATTCCAA
AGCTTTTGGTAAAGGTCACCACTAACTTAAATGGAAACCttataaaggaa
gaaatttaagaaactcTAAAGAATTCTTTGATTTACCTCAGTGTGAACAT
CTCCTTCTTTAAGGCGGGATCCCTTAACTCTTTTCCTCATAGAGTGGACA
GGAGATTAGAGGTGggataaagtaaaaataaggGGATTGGTTTGAAGTAT
TTAGTTTAGATCACAAAATGGCAAAATGTTTATCTGCGGCACCGCCATTT
TACACCCATTTACCATACAAATGTGAAAATAATTTGGTATAAAACAGTAA
atctttaaaagatttttaaaataggGAACGTGCCTTTATTTTTGGGAAGG
ATGTTAAATGGGGTTACATATAATGTTAAACTTCAAAACAGATACTTTTA
CCTGCTGAGTTCATTCTCTTCGATAAAAGATCCACCGCTGTATACATCGG
AGGCATAACGGTAAGGTATCCCAGTCTTGTCTGACAGGTAAAGTAGTAAC
CCTTTCCAGTGTTCTTCTGGGAGACATGTTTCCAAATTGCAATCAGTGAG
GATGTTAAAAAGCAGAGGAAGCTTGAGTTGGAATTTCTTCATTAACGCAG
CATCACTCTTACACTTTGGTTCAAGCATCCTTAAACTCAAATTCAAATCG
TTTTCGCCAAAGTAGGAACAGACTGGACTTGAAGAGTAAAggcacttgaa
aaaaagtttgatcgATTTTGGCAGATCATCACCGAACGTGTCACGAGCCC
ACTTTAACGTACGGAATATGACGGGGTAGATAATTTCAagctttttggaa
aattccatCGACGCATTCTTTTTGGTTACCCATTCCTTGAATGAGTCCCG
TAAATCTTTGTCAGCGATAGCCAAGCGATCAGCATGTTTCCTAGCAGTAT
AGAGTGAGATTTATTTAGTATGAAGAAGCATAAAAAATAAGCTGATTCAC
TGATGCTTAAAAGCTTCAATTCATACAGTCacaaaacttttaacaaaact
gtcgtttttttataaaatgctGAGATACCGTAGTGCCATAGCAAATTCGG
TAAAATCTAAATAAACAAGAACTCACGAAAACTTTTGGGTACATAATTCG
GATGGATTTTCCTGTAGCACCAGGGCCGAGAATTTCTTCTGATGACCCAA
ACTTGTTGCATCACATATAATTGCAGCAGGATCTTGTTTGCAGATTTTAC
aaatcgatccttcgttgaagTCGATGTCAAGTAGCTCCAAAAAGGAATAC
CACGAATCTTTGAAGTCTTTGTACGTCAGCTCGCATTTTTCGTGGCCAGA
GCTTTTCTGACTCAACGAGAAAACTTCGTAATAGCCATGAAGTGTACAAC
TAAAAATAAAGGTGTATGAAATT
Run BLAST on NCBI

protein sequence of TCONS_00038693-protein

>TCONS_00038693-protein ID=TCONS_00038693-protein|Name=TCONS_00038693-protein|organism=Clytia hemisphaerica|type=polypeptide|length=189bp
MVSLIGLVVGLNKNLAVQDGESVYRLTRQEDIPCDIAILCGNDQYVYMAD
VDEFDETKCRSHNMFCFDDSEEDVIVCPNCLLTYHNTCVRWNDDCGCTKI
PEIKSRITAMLDNQVINTFMCEIYKRTNQLTKKASNMLNGHQKSARSELI
HVRVTDGRCGVLTKMNLFSKTIPDQVVSENYFTLYTVYP
Run BLAST on NCBI

transcript from alignment at sc0001911:21346..27457+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038693 ID=TCONS_00038693|Name=TCONS_00038693|organism=Clytia hemisphaerica|type=transcript|length=6112bp|location=Sequence derived from alignment at sc0001911:21346..27457+ (Clytia hemisphaerica)
GTCAGATTGGCTTTGACTGGGCTAGTGTGACAGACATTTTTCCAGAACTA
TAAAGGTTCATCCTTATCAGAGCTCATTTCGTTTTGGTCAATCGAGAAAA
AATGTTACCatcagtttgtttttatttacattttagcCTTTGAAGAAGAA
TCTTCAgagagtgaaagtgaaagtgaagatGAAGAGGAAACTCCTGCAAA
GAAACAAAAGCTTACTTTTGATGTTGATTGGGAAGATAATCTAAAGGTTA
TCCCGAAACGTGACCTCCTGTGTGATATTACTTATCGATCAACAGGTTAG
TTCCTATGCTTTAAAAAGTATCTATTCATTTACCTTATACCGTAGAAAAC
CCTTAAAAGTATGGTCAGTGCTTAGAATTATGATATGCAATAGGTAGACA
AACTTAGATTTTAAATACTTTAGGCTTCACAAAACGAACGATGAAGTGGG
TCGAACAGAATAAACCCAGTTGGTGGCCACGTCGAATATTGTTTCGATCT
CCTCATGGTAAAAGCAAAATTCCCGTGGCTGAAATGGACGATATCCTTCG
ATCATTCCATGAGCATAAAGTCATTAAAGCTGTCGTAAGTTTTATTCCCG
TTTTGTGGAAAACATCAATTTAACAATTTGGAGGATTGTATGTACGTCAA
CTCTACGTCGATCTAGTAATTTCGTGATACATCCATAATTCGCATAGCTG
CTTCAAATAAATAATCTTATATTGTTTTAGGAAAAACTGTGCTCTGATGA
TGTAGACGTTTTCTTTCCAACTTTTTCCAAAATGGAAGAACATTTGAATT
TATTCCTGAAGAAGGCTTCCATCATCACGGAGTGGTTGAAGAGAAATAGA
AAAATCCAAAGAGTTGCAATGGCAGATATCGAATACAGGTGATCCTTTTA
TCTAAGttcaatttcatttatttttttgtatttgtgTTTGAAAGCCGCTC
TAAAGAAATGCTGCCGCGATAATTAGGGGACCCATGGTTTGGTGGTACTT
CCATGGTGTACACTGAAAATTACTTTAAGTGACCTACGTGTAAAAGTNTT
GAAACTTACTTTAAGTGACCTACGGgtaaaagttcaaaaacttGTCATGA
TGATATTTGTTGCCCTGTTAGTAGCTCTATGCTCTTAGTAGCTTTTTACT
AGTAAATATTCTATTTTGaataatataaaattttattttgtcacTAGATG
CCGGTATCTAACAACAAAGTTTGGCACGAGAAAGGAGCCCATCCTCTTTG
GGTCAATACATCGTTGAACGCCGCATtacgaaaaatttttcaaaattcta
tcGTTGGCATATGCTGTAAcgagaaaaaatgatttaaataactatGTAAG
AATTGAAATTTGAATCGATTTTTGATATGAATATAGATGAATATATGTAT
ATATATCTACGTTTGTTATTATATGTTAATTATATTTCATTCTAAGGGAA
CATCCGTCcttctttgaaaattattataaattttatCAATCTAGATTATG
TATGTTTTTGGCTTTTATGCATTACCACTTTATTTCTAGATATGTGACGG
AATAGATGATGTATCGCCGAAGAAGTTTCAGTCATGGCTTAACGTCAAAG
ACATTAACAATTTGGAAGCATCACTTCTTACAAATGCATTTGAATGTAAC
GGTAATAGTTATAAAATTTCTTAAGTTATGTGACTTTTCGTAATTTTCGC
AATGTTGCGAAAGTCCAGTGGAGTTAGAACCCTCGTATTTTAATTTGTTT
AAAGGGaatagcgctatacttatagtaggggtcggagttgctggtagttc
catggtatactctgaaatacatgctgatgtcagcNAAAAATGTCGAAGTC
ATAATATGTTTTGTTTCGATGATAGTGAAGAGGACGTCATTGTGTGCCCA
AATTGCCTACTCACCTACCACAACACGTGTGTGCGTTGGAATGATGATTG
TGGGTGTACTAAAATCCCTGAAATCAAATCGAGGTACAGTATAATCATCC
ANAAAAACTCTTCATCGCATGAAAAGACAATTGATTTTTGATAGATGAAA
GACtaactttttaaacaaaaagtttatatttaTTTCACTTCATAACACTG
TGAGAAAGGGTTATGTAGGTGTAACCTGACTCTCTCTCCATCCGTATAAC
AGAAAAGAGTTAGACTCTGAACCACTCTTTGTTTGTCTCGGAGAAACATA
ATGAAAAAAATTAAAAAAATTTCCCCCCCCCCCCCCCATTTTATAAAGCT
GACTTGTTCTGATGACTGATGACTGGGTTCCAATAAATCTTCATCTTGAT
TCAATTCAATCGTAGGTATCAACTGATAAACTTATCTTTTGACTCGACTT
GACAAAACAGAAACTTATTGAGACACGACTGTACCGTACGAAATTGACTG
AACACAATATTGGTTTATGTCTTATTTATGCTCGCAAAATCCTAACAGGT
TTCATTTATATTTTTTGTCAAAATTTTTACTCTTGAATCAGCCTTTTTTT
ACAAATATTAACAAAGTCCAATTTCAAGTGTGTATTCTAACATTTCTGGC
TATCTGTTCTTGATGAAAACCAACGCATCAACTTTTTTAAGTCTTGAAAT
AATTTTCAATGAGAATAGAAATGTATTTAACGGTGATTTTTGTTACTTCT
ATTCCAACTGTTATAGCAATGGTATCCTTGATTGGGCTGGTCGTAGGGCT
CAATAAAAATCTGGCAGTTCAAGACGGTGAAAGCGTGTACCGACTGACAA
GGCAAGAAGACATTCCATGCGACATTGCCATTTTATGCGGAAATGATCAA
TACGTGTACATGGCTGATGTGGATGAATTTGACGAGACAAAATGTCGAAG
TCATAATATGTTTTGTTTCGATGATAGTGAAGAGGACGTCATTGTGTGCC
CAAATTGCCTCCTCACCTACCACAACACGTGTGTGCGTTGGAATGATGAT
TGTGGGTGTACTAAAATCCCTGAAATCAAATCGAGGTACAGTATAATCAT
CCAATAGAGGAAACTTAAAAAGGCAGATCTCTGATTAGGACGTAATGGTA
TTTTCCGCTTGCTAGTCAAAACCTCATcagaaacttttcaaaataggTAC
ACTTAATTAGATAAGGTTTCTACATGGAATTTTGTTGGTCAGAAGCATAC
TTTTTCCTCTCAATTTATCATACACAACAGACATAAACTGgttaaaaaag
gtcaaaaataagAGTGTTTTATCTTATTACAGTAGTTGACGCtcctaatt
cgatcttcaagggaaattggaaaaaaaaatgaattaatttaCTTGAATCC
TAAActagaaagttttaaaagtttatgCCCTTAAACTATCTACTTTCGTC
TTAGAATAACTGCAATGCTGGATAATCAAGTTATCAATACCTTTATGTGT
GAGATTTACAAAAGAACAAATCAACTCACGGTGAGATATTATATTACTAG
TCCTACGCTATATACGCTTAACAATCGGGCTTTGTGGTTTCATATACTAT
CAGTCGAATGTAAAACATGATCTTGGTCGCTCATGTTTACTTGATGcgga
tttgaaatatttttttaaaaatagattaacttatttttcagaaaaaggca
TCTAATATGTTAAATGGGCATCAAAAATCTGCAAGGAGTGAACTGATCCA
TGTCAGGGTAACTGATGGCAGATGTGGAGTATTGACAAAGatgaatttgt
tttcaaaaacaataccTGATCAAGTCGTAAGCGAAAACTATTTTACATTA
TATACAGTGTACCCTTAAAAAGTGTAAtgatatattatatattattatgG
TCATGGTTAGGAAGAGTATGGATTAGGTACATTTTGATTTTAGTCTGACT
TTTGGTTAAAATCTACTTTCTTTTCTAACATAATGACACCGCATCGAAGT
GCTCAACATGATGAGAAACAGCCATATTTTTGATAGGGAACTGGCAAATA
ACTCTCTAGTTAGATTATTTAATAAGTCTCTAGTTAGAGAGAAGAAACTT
TACCGAATTCGGCGGACTACCctaaaaatttcctaaattcGTCAAATTAA
CTTTTATATCTAGATCATTGGCGAAACTTAattctaattatttttttaac
acgGCTTTTTTCTCGATATATACAGGTGGTTTTAAATCATTTCCAGCCCC
TGGACTTTNCAAGATCTTGAAGTGTGGTTTATATCCCTCAAAGCTCtaat
caaaaagacaaaatacttTGATCTTTCACAgagttaaattattttttgag
taATTTGTGTAAATTCAAGAAACACACCCCTATTAAACCTTCTCCTGAAT
ATTGTAAACGGAACATTTGGCGACTCTTCTTTATCCATCACCTGAAAGCC
ATAACAAATACCTAAAAGATACGCATTAGTTTTCATAGATTGTCTGTATT
TACTTGTTTGCACCAAAACATTGAAACGACTACAATCAAGTTGTATCCAT
ACATAATAACTTTTAAATGTGGTAGGCAAAATGATCATTTATAAAAAGAA
TGGGAACACAAAAAATTTTACCGTGTGGGCAGTAGATAGTGAATATACCA
GATGTCAAGTTTGGGTGACCTTTATAATTTTTGCGACAATTGCcgtattt
tgtatttattgcATCCTGCTCGTAGCTGCCTCTCGGTCGCAAGGGTGGAA
GATTTGGAAAGCTTAAATGGAATACGTAATAGTAATTTGCAATTTAATAA
AAGCAAATGTAATCAGTCAATTAAGATCAGGGATTCCAAAGCTTTTGGTA
AAGGTCACCACTAACTTAAATGGAAACCttataaaggaagaaatttaaga
aactcTAAAGAATTCTTTGATTTACCTCAGTGTGAACATCTCCTTCTTTA
AGGCGGGATCCCTTAACTCTTTTCCTCATAGAGTGGACAGGAGATTAGAG
GTGggataaagtaaaaataaggGGATTGGTTTGAAGTATTTAGTTTAGAT
CACAAAATGGCAAAATGTTTATCTGCGGCACCGCCATTTTACACCCATTT
ACCATACAAATGTGAAAATAATTTGGTATAAAACAGTAAatctttaaaag
atttttaaaataggGAACGTGCCTTTATTTTTGGGAAGGATGTTAAATGG
GGTTACATATAATGTTAAACTTCAAAACAGATACTTTTACCTGCTGAGTT
CATTCTCTTCGATAAAAGATCCACCGCTGTATACATCGGAGGCATAACGG
TAAGGTATCCCAGTCTTGTCTGACAGGTAAAGTAGTAACCCTTTCCAGTG
TTCTTCTGGGAGACATGTTTCCAAATTGCAATCAGTGAGGATGTTAAAAA
GCAGAGGAAGCTTGAGTTGGAATTTCTTCATTAACGCAGCATCACTCTTA
CACTTTGGTTCAAGCATCCTTAAACTCAAATTCAAATCGTTTTCGCCAAA
GTAGGAACAGACTGGACTTGAAGAGTAAAggcacttgaaaaaaagtttga
tcgATTTTGGCAGATCATCACCGAACGTGTCACGAGCCCACTTTAACGTA
CGGAATATGACGGGGTAGATAATTTCAagctttttggaaaattccatCGA
CGCATTCTTTTTGGTTACCCATTCCTTGAATGAGTCCCGTAAATCTTTGT
CAGCGATAGCCAAGCGATCAGCATGTTTCCTAGCAGTATAGAGTGAGATT
TATTTAGTATGAAGAAGCATAAAAAATAAGCTGATTCACTGATGCTTAAA
AGCTTCAATTCATACAGTCacaaaacttttaacaaaactgtcgttttttt
ataaaatgctGAGATACCGTAGTGCCATAGCAAATTCGGTAAAATCTAAA
TAAACAAGAACTCACGAAAACTTTTGGGTACATAATTCGGATGGATTTTC
CTGTAGCACCAGGGCCGAGAATTTCTTCTGATGACCCAAACTTGTTGCAT
CACATATAATTGCAGCAGGATCTTGTTTGCAGATTTTACaaatcgatcct
tcgttgaagTCGATGTCAAGTAGCTCCAAAAAGGAATACCACGAATCTTT
GAAGTCTTTGTACGTCAGCTCGCATTTTTCGTGGCCAGAGCTTTTCTGAC
TCAACGAGAAAACTTCGTAATAGCCATGAAGTGTACAACTAAAAATAAAG
GTGTATGAAATT

Coding sequence (CDS) from alignment at sc0001911:21346..27457+

>TCONS_00038693 ID=TCONS_00038693|Name=TCONS_00038693|organism=Clytia hemisphaerica|type=CDS|length=1710bp|location=Sequence derived from alignment at sc0001911:21346..27457+ (Clytia hemisphaerica)
ATGGTATCCTTGATTGGGCTGGTCGTAGGGCTCAATAAAAATCTGGCAGT
TCAAGACGGTGAAAGCGTGTACCGACTGACAAGGCAAGAAGACATTCCAT
GCGACATTGCCATTTTATGCGGAAATGATCAATACGTGTACATGGCTGAT
GTGGATGAATTTGACGAGACAAAATGTCGAAGTCATAATATGTTTTGTTT
CGATGATAGTGAAGAGGACGTCATTGTGTGCCCAAATTGCCTCCTCACCT
ACCACAACACGTGTGTGCGTTGGAATGATGATTGTGGGTGTACTAAAATC
CCTGAAATCAAATCGAGAATAACTGCAATGCTGGATAATCAAGTTATCAA
TACCTTTATGTGTGAGATTTACAAAAGAACAAATCAACTCACGaaaaagg
caTCTAATATGTTAAATGGGCATCAAAAATCTGCAAGGAGTGAACTGATC
CATGTCAGGGTAACTGATGGCAGATGTGGAGTATTGACAAAGatgaattt
gttttcaaaaacaataccTGATCAAGTCGTAAGCGAAAACTATTTTACAT
TATATACAGTGTACCCTTAAATGGTATCCTTGATTGGGCTGGTCGTAGGG
CTCAATAAAAATCTGGCAGTTCAAGACGGTGAAAGCGTGTACCGACTGAC
AAGGCAAGAAGACATTCCATGCGACATTGCCATTTTATGCGGAAATGATC
AATACGTGTACATGGCTGATGTGGATGAATTTGACGAGACAAAATGTCGA
AGTCATAATATGTTTTGTTTCGATGATAGTGAAGAGGACGTCATTGTGTG
CCCAAATTGCCTCCTCACCTACCACAACACGTGTGTGCGTTGGAATGATG
ATTGTGGGTGTACTAAAATCCCTGAAATCAAATCGAGAATAACTGCAATG
CTGGATAATCAAGTTATCAATACCTTTATGTGTGAGATTTACAAAAGAAC
AAATCAACTCACGaaaaaggcaTCTAATATGTTAAATGGGCATCAAAAAT
CTGCAAGGAGTGAACTGATCCATGTCAGGGTAACTGATGGCAGATGTGGA
GTATTGACAAAGatgaatttgttttcaaaaacaataccTGATCAAGTCGT
AAGCGAAAACTATTTTACATTATATACAGTGTACCCTTAAATGGTATCCT
TGATTGGGCTGGTCGTAGGGCTCAATAAAAATCTGGCAGTTCAAGACGGT
GAAAGCGTGTACCGACTGACAAGGCAAGAAGACATTCCATGCGACATTGC
CATTTTATGCGGAAATGATCAATACGTGTACATGGCTGATGTGGATGAAT
TTGACGAGACAAAATGTCGAAGTCATAATATGTTTTGTTTCGATGATAGT
GAAGAGGACGTCATTGTGTGCCCAAATTGCCTCCTCACCTACCACAACAC
GTGTGTGCGTTGGAATGATGATTGTGGGTGTACTAAAATCCCTGAAATCA
AATCGAGAATAACTGCAATGCTGGATAATCAAGTTATCAATACCTTTATG
TGTGAGATTTACAAAAGAACAAATCAACTCACGaaaaaggcaTCTAATAT
GTTAAATGGGCATCAAAAATCTGCAAGGAGTGAACTGATCCATGTCAGGG
TAACTGATGGCAGATGTGGAGTATTGACAAAGatgaatttgttttcaaaa
acaataccTGATCAAGTCGTAAGCGAAAACTATTTTACATTATATACAGT
GTACCCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023226XLOC_023226Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038693-proteinTCONS_00038693-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038693-exon-sc0001911-1491911889:21346..21640TCONS_00038693-exon-sc0001911-1491911889:21346..21640Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1510915933:21346..21640TCONS_00038693-exon-sc0001911-1510915933:21346..21640Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1575043694:21346..21640TCONS_00038693-exon-sc0001911-1575043694:21346..21640Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1491911889:21769..21929TCONS_00038693-exon-sc0001911-1491911889:21769..21929Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1510915933:21769..21929TCONS_00038693-exon-sc0001911-1510915933:21769..21929Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1575043694:21769..21929TCONS_00038693-exon-sc0001911-1575043694:21769..21929Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1491911889:22076..22233TCONS_00038693-exon-sc0001911-1491911889:22076..22233Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1510915933:22076..22233TCONS_00038693-exon-sc0001911-1510915933:22076..22233Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1575043694:22076..22233TCONS_00038693-exon-sc0001911-1575043694:22076..22233Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1491911889:22543..22690TCONS_00038693-exon-sc0001911-1491911889:22543..22690Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1510915933:22543..22690TCONS_00038693-exon-sc0001911-1510915933:22543..22690Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1575043694:22543..22690TCONS_00038693-exon-sc0001911-1575043694:22543..22690Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1491911889:22885..22996TCONS_00038693-exon-sc0001911-1491911889:22885..22996Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1510915933:22885..22996TCONS_00038693-exon-sc0001911-1510915933:22885..22996Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1575043694:22885..22996TCONS_00038693-exon-sc0001911-1575043694:22885..22996Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1491911889:23661..23793TCONS_00038693-exon-sc0001911-1491911889:23661..23793Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1510915933:23661..23793TCONS_00038693-exon-sc0001911-1510915933:23661..23793Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1575043694:23661..23793TCONS_00038693-exon-sc0001911-1575043694:23661..23793Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1491911889:24012..24330TCONS_00038693-exon-sc0001911-1491911889:24012..24330Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1510915933:24012..24330TCONS_00038693-exon-sc0001911-1510915933:24012..24330Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1575043694:24012..24330TCONS_00038693-exon-sc0001911-1575043694:24012..24330Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1491911889:24700..24775TCONS_00038693-exon-sc0001911-1491911889:24700..24775Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1510915933:24700..24775TCONS_00038693-exon-sc0001911-1510915933:24700..24775Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1575043694:24700..24775TCONS_00038693-exon-sc0001911-1575043694:24700..24775Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1491911889:24937..27457TCONS_00038693-exon-sc0001911-1491911889:24937..27457Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1510915933:24937..27457TCONS_00038693-exon-sc0001911-1510915933:24937..27457Clytia hemisphaericaexon
TCONS_00038693-exon-sc0001911-1575043694:24937..27457TCONS_00038693-exon-sc0001911-1575043694:24937..27457Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001911supercontigsc0001911:21346..27457 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.537143	0.336107	0.225816	0.0312896	3.50991	2.52789	2.59529	3.41542	1.29921	2.36703	1.21942	1.63259	1.34365	1.27654	1.02196	1.68582	2.14928	1.75404	1.04419	0.480084	1.79928	0.99826	0.773578	1.0874	0.796088	1.87333	2.16817	0.824938	1.08707	1.07603
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038693 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top