XLOC_023093 (gene) - C. hemisphaerica

Overview
NameXLOC_023093
Unique NameXLOC_023093
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001871:24898..31517-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023093 ID=XLOC_023093|Name=XLOC_023093|organism=Clytia hemisphaerica|type=gene|length=6620bp|location=Sequence derived from alignment at sc0001871:24898..31517- (Clytia hemisphaerica)
NNCGCAGCGCCCTCTGCCAATCATCTGTTGTATATTTTGAGTAAATGAAT ATCTACGCTCATGGTATCAACCATGAAGTTTGGAGCTCGATGGTTACATA CGGCTGACGGTATTTATCAGGTAAATAATTTTGTGATCATATTAGATTTC AACAATAACGAGGGGGTTTATCTAAAGAATCCTGCATTACTAAAAATAGA CAAAAAGAACGACAAATTTCATAAAAAACGACATATTTCGCCGTCCACAA CCCCGACCGAAAGTGACTGTAACACCCCTAGCGATTCATTCCCTTTCGTT TATCACGGGAATTAATTACATGTGGTCTAAAAGAACGACAAATTACGCAT GCGTGTTACAATGCAGGATCCTTNNNNNNNNNNNNNNNNNNNNNGATTCA TTCCCTTTCGTTTATCACGGGAATTAATTACATGTGGTCTAAAAGAACGA CAAATTACGCATGCGTGTTACAATGCAGGATCCTTTAGAGGAACAAACAA TAACCTACAAACGCGTGGTTACTGGAGAGTGATCGAATTGAAACCCCGAC GTTGTCCCCACGAACCAGTGTAGACTTGATAGCCCAGTCGGTAGCGCAGT TGAACTAGTAATGCGAAAGTCGTGAAATTCCACCCTTTTGGTCAAACATC TAAATACGAGATTAAATTTCAAGCAGGGGGGGGTACCAAGTCAGTGTACT GGACCATAGGGTACTAACTTGATTTTTGGATTTTTTTCCAAAAAATTAGA CCACCACCCTTTTTAGTACACTGTACNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNTTTTTCACGGCCGGGGCTTTGACACCACCCTTTTAGTACACTGT ACTAACTTTCTTCCACAGCCGGAGCTTTGATACCACCCTTTCAGTACACT GTACTAGCTGTTTTTTCGATCAGATAAGTTTAGAAACCACCCCTTATAGT GCACTGTTCTAATTTCTTTTTGTCCAAATAAGTTTAATTGCCAGCATATA CAAGGGTTTTGAAGCATTTTGCTAAGAAAAGCACCAAAATAAAAAAGGAA AGATTTGAATATTAAAATACTTGAATCCTTATATAGTACAAACACTGAAA CAATGAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACT CAAAACCAACTTTGAGTTATTTCCCTTCTTGTGACTTGATTTCTGATTGT CTGGCAAGCTGTAGCAGTTTTTCTTTTTTGAAAAATAAAAATAAAAGACT TATATAATAACATTGTACACAAGCTGAAACGGAAAATCTTTTATCAAATG TAATACAAAATATATAAAAAGGTGCTTTCCCTGTAAAATTTTATAAAATA TCAAATTTTGAGGTAAAATTTGAGAAATTTCAAAAGATTTTGCTCTGAAA GGGCAAAAAAATTCAAAAAATTACACTATAAGGGGCGCTTTTCAGCCAAA TTTTTCCTGCACTGTAAGGGACCAATTTTAGAGACCTGATTTTTGGCCGA ACGTACGGTCGTTTTCACCCCCTCCCCCTGGTGATTTCACTTATATACAG ATTTTTTTCAATTAACATCAATCCAACAAGGTTACTAAAAACATAAAACA ATAGAGCGGATTTTCTTTACTAAAACTTGAAAGCTTCGATTCGAACGTTT ACACAAATTCTTGTTGTTGCCGTAATGTAGATAGGGCCTTAAAGAAAACG TAAACAAGATTGAACTTAAGGCCGGTTTCCACTTGCGCATGCTGCGAATC TTAAACAAATCCAATCAAGTAAACAGGAAAAATTGGGAGAAAATCAGTGT ACCAATTTGTATAGCTTAACCAGCCTTGACTTGAAGGTCTCGGACCAGCT TGGACCTGGCAAATTAGGGCAAATATACATGGGNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCT TCATTGTATTTTTCTCAGAGGACCACCCTTTTAGTACACTGTACTAACTC AATTTAACCTAAAAAATACACCACCCCACCAGCTATGGGCCAGTACACTN CACGAACCAGTGTAGACTTCATAGCACAGTCGGTAGCGCAGTTGAACTAG TAATGCGAAAGTCGTGAAATTCCACCCATTTGGTCAAACATCTAAATACG AGATTAAATTTCAAGGCAACTTCATTTATCTTCTTTAAAAAGATTTTAAA TTTGAGGTATCTTACATAGGCTGTATTTTTGTATAATAGACCTAATTCGA AAATGGCAAACAATCGATCTTGGAATGATCTCTAACAGGTTAGATTTGGG TTTATTTGTCTATGGAACCGCGATTATACAGACTCTTACCCTCGATCTGT TTTTATATGTTCACCTTAGTACATCTAATAGTATGATGCTAACGATGTTA GAAGTAAAGANTCCTTGGTAATTTTAAAGCCGGTACCCGGTACTAAAAAG GGGGTGGGGTCCCTTTTTCCTTAAGAAAAAGTAAGTACCCGGTACTAAAA AGGGGGTGGTGGTACCTAAGACAATTTTTCTTAAAAACCAGGTTAGTACC CTATGGGTTAGTACCCTGCGGCTGTACCCCCCCCCCCTGGAAAACAAACA ACATAATTATGGTCGAAGGCTTTAACAATAACCTTAATCAAAGGGTCGTT ACGAAGTCCTGTAATTCTCGTTTTATTGGATNACCCCCCCCCCCTGGAAA ACAAGCAATATAATTATAGTCGAAGGCTTTAACAATAACCTTAATCAAAG GGTCGTTACGAAATCCTGTAATTCTCGTTTTATTGGATTCTTAAGCCACG ATGTTTGTTCGATTACCACTCTCGAATTTCTCAATTAGATCTTCTATTGT GAATGATAGTAGAATCGAAACTTCCCTTCAACAAGTCCCACATTGATTTG GTAAATTGTTAATTTTGAGTTTTGTAAGAGGACGTTCAAAATTTAACATT TTCTCTATATTTTATTCCAGGATACGAACTTGTGGCATGAGCATCCCCAT GGCTTCAACAACCTGGATTCGATTGGTGGATGAAATTTGTGATAATAATG GAATTGCTTTGACATAGCTGATGGATGTTGTCTTCTCCGTAGATGCATTT ACTTGCTTGGTGATTGTTGCGAACCATTGGTGTATTTATAAGAGTATTCG ATGCAGTCGTTGAGGTGTGATATGATATGCTGATGGATGGATTATCTTGA AGTGATTTCTTTGGTTGAAAGATGACCTCTTTTAGCCCAGTCATCAACCG TGGCCAATGCTGCTTGGCCAGTGTTAAAAATCAGATCGTTCATTTCTTGG AATGAAAAATCGTCATTTGAAGAGCGACTGTTAAATGAAGTTGTCTCGAT ATCAATTCTGTAATATTGGTTACCAATTCTTTGGTTCTTTTTGCCTATTG ATTAAACTATTTTGATGGGTTAACTTATTAGTGTTCTAATCAATGATTTG TGTAGAATTTAAGCACCCCAAAAAAGCCTACATTTTGACTCAGCAGGATT TTGTTGGGGTTTTAGTTTGTCCCAAGCATTCAAACCTTATTTGTGTGAAA GGAGACATATTTTCAAAGAGTTTACTTGAATCATTTATCACAATTAGTGT TTTGACTAAGTGTAAATAATTATTTGTGGCCTGAAAGGGACTTTTCTTAA AATCGAACTTCTTTTTGGACTTAAAATCACTGCCATGAAATTCGAGTTTT GTGATAGTATAACTAAATTCTAGATGAAGTTTTTATTTGTCAGAATCGAT TGTTATCAGCGTTTTACAACTACATTTAGTAAGGCTGGACTTGAAAAATT GTTGGTTTACCGTCACCCCTGCCGACCCAAAAAGTTTTATTGCCATTTTA AAGAAGAAATTTTTTTTCTTCAAAAAAAAAACCTTCAAACAATCAAATCA AAACCCGTATCTTGTCTGTCTCAAGCATAAGAATCGTGAATTCCCTGCTA GCGCTCTTCTGTTTTCCATTCAAAATTACCTAAATGTAAACAAACTGTTT TAACCCTTCCATGTACGAAAATTTCATAAATCGTCAAATAAAATAAATTT CCGACCGACCGACCCACCTCTAAAATCTAGCGTCGGGTGAAGGTAAACTA ACAATTTTTTAAGTTCAGTCTAATGGGCCATTTCATTTATATCCATACAT GGGATTGGACGAACATTTCCAGGGTGATCTCCAAAAAAATTTCCAGGGGG GTCCAAGGTTCCTTTACGAACTTTTTTCAGGGAGTTGTTTTCCAAGGGGT TGGATGACTAAGCATCTAAATTTCCTTTGGGCATGAATAATTGGCTCGTT TATTATCTAATGTTCAAAGTTCCAGGACCCTAATTTGATTATAAAAAACT TATTCTAAAATTTCCAAAGGGTAAAAGATGGATTTCATTCGTCCTTTCTC AATATCTTGATTAAAGAAGGATTTTTCGATGGACAATAGAATCCTTTTTT CCAGATTTTTGCAAATTTTGCCATTATTAAAGCAAATATATGTACAATTT CGTTAATTCTTTTGGCTTAAAAAGATTCGTCATGTGTTTCCTGTATGGAT ATCAAATGAAATAGCTCAATGGTCTTATTTTATTTGATTTCGTTCATTTT CTCAGTCTGGTAAAGCCCTTTCGTTAGGAGTTAGGAAATCAAGCAATCTT TATATTTTTGCCAACAAGGCACTCTATCCTATCTGCCAACGAGAGGTGAA AGAGCTGCTCTGATTACAAAGCTAAATTGATCCTAGTGACATTCTGAATG GGCTGGGTACAAAGGAAGGGAAATGGTAGAAGTGTCACTCACCATTTTCT CAATGGCTAATACTTGAATATTTTTGCAGACTATTATTTTGTAGCTTTTG TTTTTGCTTTTCATCTAGTAGCCTTTTAGACCTCAATATTCCATTTTGAT CAAATACTCTTGACAGACAAAACTCGAAAAATTACTTTCTTCGAAATTCT GTATATGAATTACCTGGTCAAAAAAAGTTTTTGGAGTGGAAGTTTTGTCT GTTAAGGGAGTGCAACAAACGTTACTTAGCCTAATAGTTCGGACGGTATT TTGGGAATTTTCTTTCGTAAATCTTCCTCCGAAATCTTAAGGTTCAGAAA CTTTAAGGAAAGGTTTGTTTATGATGATTTTGTGATGAGACCGGGGAAAG GATGTACATATTGAATACAAATCCATTGGATGGAATTTTTCACCAACGTT TGAACTTTCTCTGTGACCATTTACTTTATGCACAGGTGTTTATTTCCTTC ATCAAACTTCATTATCGCTAAAAAGGTTTTACCTAAAAGTTGGCTCTCCC CATTATCGCGAAAAAGGCGTTCCCTCCAATAGGTTGTACAGAGCACTTTG CTTCCTAATTTAAGTGATTTATCACGAAATTCACGAAAGCATTCTTGTCT GTTAGTGTCCGTTTCTTTCCCCTCCTTCAGATTTTTGAAAACTTTTGTTT TGAAACCCCTCCCCTTTTGGGAATTGTTAAAGTCAATGAACCCAAATGTC AACAATTTAAAGACAGTTTATCGAATTATATTTTGCCGAATCTTTCTGAA TATTTTTCACACATTTCCCCAGAGATCTTAAACACATTTTTTTCTTTTAT AAGCATAACGTTTATAAGCATATGCAGAGTCAGTTTTTGGTACCTAGACA ATGGCTCTATTATTTGAGAACAATAGAATGCTAAGCATAATGCGAGCCTG ATATAGGGACATACACTTGCTTATAGAAAAACATGTATTTTCATATGAGT TTAAAAAAAACTGTTTAATGGACTCTCACTAATTCGAGCTCCCGTTCGTA AATCTTCTTAATTTGCACCTCTTTACAGACTACTATTCAAGTTCGAATTA GTGGGAATTTGTTTTGGAGAATAGAAAATCTATGTTTTGAGTATTATAAT GTAAGATATTTTATGGCCGATTTTTACAACTCCAATCAAAAATTTTCCTA CTCTCGGGTACCTAATAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038509TCONS_00038509Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001871supercontigsc0001871:24898..31517 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.39 2.29 0.77 0.97 5.36 3.8 5.66 5.75 3.2 3.68 4.11 3.98 3.39 3.83 2.89 4.62 3.07 3.75 1.93 2.57 4.87 5.37 2.92 3.22 4.23 4.78 3.85 3.72 3.53 2.86