XLOC_022888 (gene) - C. hemisphaerica

Overview
NameXLOC_022888
Unique NameXLOC_022888
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001814:32098..37060+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022888 ID=XLOC_022888|Name=XLOC_022888|organism=Clytia hemisphaerica|type=gene|length=4963bp|location=Sequence derived from alignment at sc0001814:32098..37060+ (Clytia hemisphaerica)
GTTGCAATCATGGTAAACAGGCTTCCAATGAAGCGAGAAATGTCGTCAAC ATAAAACAGGAAAAAATACAATTGTTAAGGGAATTAGATGACAAAGAAGT TGTATTTATTTCAATAGGTTATTTCTTATTCTAACATATCGATGAACAAG GCTAAGGAATAAAATTTGGCAAAGCCATCAAAAACGCATTTAGTGTTGGA ATAATTTACAAAGAAAGGATCTAGTACTAAAAACATTCTTACAAAAGGTT CAAATTGAAGACCGTTTGACGTCAGTAATGGCCAATAGTATGACGAAGGC CACAAGGGAACAAGCAATATTCCTTTACCTTTACAGTTTCTCAAGTGCTG AATAGTTTTACCTACTAGTGATATGGGAGGGCAAAGCCAATTAACCTCAT TTTTTCCCCAATGACATGAAAATGCGTTGATTGCTGATGTCCCTGGGCAG TATTCACGAGAGTTGAATCTAGGGGATTTTTTGTTTAGGTTATCTGCAAA TCTGTCGATTGTAATTTGTCCATAGTTTTTAATAATGTAATCGAAAGTCT CGTTGTCAATGGACCAATTATCTGTGTCGAtcgattttgaaattatatcg GCTGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTCCCAAG CGAATCCTAGAAAAGTCTGAAATCTTAAGTTAATTGGTACGTGATGATAC CCACTTTTGAGGTCAAAGGTAATTAGAAAATCGTCTTTATTAATCATCTC AGAAACCTGTTTTATATTTTCGTATGTGAATTTGTTTGGCTGAATGTGTT TGTTTACATGCCTGAGATCTAGTACTAGCCTAAGTTTGGAATTCCTTTCT GCAACGGTCAGCGGATTGATGCAATAAGGTGGCTCTGTCACTTTTTCAAT ACAACCGTTTTCTAAAAGCTTTTCAATACTATCTTTGACAAACTCTCGAT TCTTTAAGCTAGATGTGTTGTTTTTGGCGAAAAATGGAGAAGGATCCGAT TCAAATGGTATTTTGTAGCCTTCCCGCACGATACCGAGGGCGAAATTCGA CGCTTTCAATTCATTTTCCCAGAAGTTTGAAAATTCCTGAATTCTTCCGG CGACAGATAGACTTTCGGTAGATTGATCAAATTCCCAAAATCTCTCTGGA GTGGCAAAgtaagaaaaaacttttcaaaaatgcgaaaagtcgaaaaaaga aagaaagtaaaataaaaacaaatttgatcaAGGTAAAATATCTCATTCGA CGAATTGTCATGCGTTCATTAGCCAATACAAAGGCATAAATTATATATCA ATGACattcttaaaaatcataaacaCGAATAATGGGCTTATGATGGCAAT TTAAGAACACAACGTTAGTCATAtgataaaaatatattattatAGTCTAT AAATTCAGCAGATTGCGAGGGTGaggaaattgttttttaaaattaataac acgaataaattgtcttttttgtAATGTCGTAACTCAATTATATAGTTTTT TAACCGGATTTACTCCTGGTATTTGTTGAAGAAGGATTTTTATTAGTAGA CGAAGACCTTGTTGTCGAGTAGGCAATCGAGGGTATTTGCGATGTAGTTG TAGAAGCTGAGGTAAAGGGGCAATGTGATGAATAATGGCCGACTCTCCTA CATCCGTGACAAACTATATTGTCCATTCTATATTTTGAGTCTTGTTTTGA CTTGGGATTTTCTTTGTCGTCATCGAACCTGgcctttttgaaaagtttag ttTTTACTGATTCCGCGTTTTTTATAGCTCTCTTCAGTCTTTTTTCTTCT GCCTCCCATGATGTAAGTTCGTTAGCCTTAAATTCTTTCACAGTGAACCA GCCGTTCGTATCAGCGATTCTCAAATGCTTCACCCTGGTNATTATAGCTC TCTTCAGTCTTTCTTCTTCTGCCTCCCCTGATGTCAGTTCGTTAGCCTTA AATTCTTTCACAGTGAACCAGCCGTATGTATCAGCGATTCTCAAATGCTT CACCCTGGTTAGAATCAAATTCCTACCTTTTTCTAGATGATCTTTCATTG CTTGTACGTCGGCGGATTCCATGGCTTCTAAGGTGTCGTCAATAACCTCC AACACTTGTTGATTGTGTTTGAATTGGTCGGTGTGGCCAGCTTTCGTAAA TGTGATGTTGTCATTTAATCTCTGCTTATCCAATTTagcttttaattttg aaaaattttgtcgaAGTACTAGCTGTTGCTTGATCGAGTGCCTGTTTGGC GCGATTCTCAGCTTGTTGTATAACTGGTTGCATTTCGTTGCGAACTAATT GTTGTATTATAACTTGCAGTTGATTGTAGTCTACGACATTCTGTTGTTGC TCAGCAATGTTGTTTTTCCTCTTCTCACAAGATACACGATGCTTTacaac acacacacacacacacacacacacacacacacacacacacacacacacac acacacacacacaNAGGCTAAGGAATAAAATTTGGCAAAGCCATCAAAAA CGCATTTAGTGTTGGAATAATTTACAAAGAAAGGATCTAGTACTAAAAAC ATTCTTACAAAAGGTTCAAATTGAAGACCGTTTGACGTCAGTAATGGCCA ATAGTATGACGAAGGCCACAAGGGAACAAGCAATATTCCTTTACCTTTAC AGTTTCTCAAGTGCTGAATAGTTTTACCTACTAGTGATATGGGAGGGCAA AGCCAATTAACCTCATTTTTTCCCCAATGACATGAAAATGCGTTGATTGC TGATGTCCCTGGGCAGTATTCACGAGAGTTGAATCTAGGGGATTTTTTGT TTAGGTTATCTGCAAATCTGTCGATTGTAATTTGTCCATAGTTTTTAATA ATGTAATCGAAAGTCTCGTTGTCAATGGACCAATTATCTGTGTCGAtcga ttttgaaattatatcgGCTGTTTCGTTTAACGCTCGAGGGATCCAAGTAG GATAAATTTCGATATTGTGTAGTaaacaaatgttgaaaatatcaATTGCA ATGTTTTGTAAGTGTTGTTTTGTACTACCTCGATTAATAATTTTACAGAT ATTGTCGCTGTCGGTAAACCACTCCACTGTCTCGTTTTCGAGTAATTGAG GAAAAGATAGCAGAATGTATTTAACTGCTGTTAGCTCACGAAATGTCGAA CTTGTTTCCCTTTCGGTCTGGTCGAAATCTCCTTTTGCTATaatatttcc aaacttttgtaCGACGTAACCTCCGTAACCGGTACCGCTTGCGTCCGAAA AAATAATTCTGGTGATCTCAGGTTTCGTTTTTATTCTGaaagtttttact ttttctagATTGTTGTACCAAAATTCGAGTTCTTGTAAAACGTTAAGACT CAAAAGACGCTTTTTGTCCCAGGAAAAACTTGATTCgacaaatttgtaaa tttgttttgtGAATAAATACACGATCGGACCGATAGCTGGTGCCATAGCA ATGAGATTGCCTGCTAttctggaaatttttcttgCCGATAAGAATTCACT ATTTAACGCCTCTGAAATTAGCTTGagcactttttggatttttggtgttg gaacttcaaaattcatgttttcTGTGTCTATAATGAATCCTAaccatgtt ttttttctctggTTCAGGGCtagatttttcgaaattaactGTTAGAGCGG ATCGCATATCGTTGAGCATCAGGTCCCTTGTTTGTATTAAAGAGAAGTAT GAATTGTCCCCTACGATACCGTCGTCTAAATACATAGCACATTTTATTCC TTTTGAACGCCATCTCTTGACTAATTGACGCACAAGCTTTGTAAAGACTA AGCATGCGATATTCAAACCAAAAGgtaaaactttaaatacaaaaaattgc atttcgctgTCAAATTCCCAAGCGAATCCTAGAAAAGTCTGAAATCTTAA GTTAATTGGTACGTGATGATATCCACTTTTGAGGTCAAAGGTAATTAGAA AATCGTCTTTATTAATCATCTCAGAAACCTGTTTTATATTTTCGTATGTG AATTTGTTTGGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038261TCONS_00038261Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001814supercontigsc0001814:32098..37060 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.73 0.98 1.6 0 2.19 1.07 3.23 2.18 4.9 1.99 0.96 2.52 2.79 8.08 1.77 2.34 0.29 1.26 6.9 9.2 1.57 1.16 1.29 1.67 1.37 4.44 0.14 0 5.95 4.61