XLOC_022140 (gene) - C. hemisphaerica

Overview
NameXLOC_022140
Unique NameXLOC_022140
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001617:51666..55479-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022140 ID=XLOC_022140|Name=XLOC_022140|organism=Clytia hemisphaerica|type=gene|length=3814bp|location=Sequence derived from alignment at sc0001617:51666..55479- (Clytia hemisphaerica)
TTGTAGATTTGGACCAATATGTTTGTGAGCTAAATCAACAAGTTAATAAT TATCAAGATGAGGCAAATCACAAACAAAAGGATTTGTCATTATTGCCAAA CAATTCTATTTTTTTACCCTTTTGAGCAACTCAAAGACTCAGAATTTTTT TACTGTCCACATTGCAAAGAAGATACTGGGAAAAATGTACCATTAGACCC ATCACTAGGAACAGAATGGGAATATGCTGAATCATCAGGCAAAGAACCTA GATTGATTTGGGACATATTTTGGTATTGTGCTCTAGTTGGTAAGATAACC AAGTGTTGTAATGGGCATTCAATTACATCGTATCACCCTGGAATTTTGCA ACAAATTTCAAACTACCTATTCTTACTTTCTCACAAGCGTGGAATGACTA AGTCAACATATGACCTGATAATCCGTTTAGTTGAACAAGTCAACAATTTT AGTAGCATTGAAAGTATATTTCTTAGCAGTTTCGTCGATATCGTCCATCG AAAACTAGCTCTAATCAACAACACCAACATGCAGACATCTATTGAATTCA TTGAACAACTGAAGCTGTTTACTCCATCACATGATTTTATCACTTCTTGT TTTGTTTTCAATTTTGATAACTACAAAGATGTTTATCTTTCTGAAATGGA TAAACTCACCTTCATTTGGCTTTCAGGAGACCACACGTTTCGTGTGGCTG CGAATATAGGTAAGTAGCAAAAGTTACAAAGAAAGGGGTAGCATTTTCAC ATTGGGGGATGCCAAGAAGGGGGGGGTACGGAAAAGTGGTTTGTCGGTTT CAGCCTTATTTTTGTCGGTTATCGGTGAACGGAAAACATTACGGTGTCGA TGATTGAGCTTTTTTGTTCGGTTAATCGGTGAGTGGATCGATATTCAAGC GGTTTTCGGTGACAAGTTAAGTATAATGGTTTTGGAGAAATAAATTATCC CAAGAATCAAAAAGTAAATTAACTACTACATGTAATTTTTCTTTGCTCGC TTCGCTTGCATAAAATACTGTATCAGTGACCAATTGAGTCTTTCAGATTT CAAGAGTGCATAAATGACCTTTGTTACAGGAAAACTTGGAATAATTCTGC TAGATTTAGTAGCAGTATTGGGGAACTGCCAGCGGCGGCCGATTTTTCTA TGGAGGGGGACAAGGGGCACCAAAAGGCGCCTCTGACATAGGGTCCACCC CCCCAGAGATTTGGGGGTACCTAAAAAGAAAATTCTAAACTTTAAGGGGT ACCTTGAAGTATTCCCAAATTTAGAAGGTATCTGATATATTTGGGGGTAT CTGTAATCTCGTAAGTGGGGGCGGGGGCTGTTCTTTCTGTACGAAGTATT TTCCTTGGCTCAACCAATTTTCCAATTTTCAATCAAACCTTTTCATTGAG AAGACTTTATAACTTATGTCTTTCCCTTTTCATCCAGTTTTCTTCTCTTA CATTGACGAATGAGCATAAAATCCTTTATATTGCATTTAACAATAAAAAA GGGGGTAACTCAAAGTTGGGGGGCTAAGTTTAGAATTCTAAAAATTTTGG GGGTACCAAAATGATTGGAGGTACCTGAACCCTGGAGGACCCTATGTCTG ATTGCTAATTTTGGCGCCTCTTTGCTGTTATAAACCCTAAAATTAGCAGT TTTCAGCCAAAAAGAGGAAAAATATCCAAAGATTTCGCTGATTTTCGCTG ATTTCGCTTGCGTAAGCTTTCCAAATATCTTTTTCTTAATAAGGGGGCGC CAAAATACTAACTCTTGAAAATTACTTCCTTACTTTGCCCAAATATTGGT TGATCAACCACGCTACTGTTTAGCAGCCCCAAAAAGATGCTCTTTCTAGG CACCAAATCTTAGAGATCTCAATCAATCAATATTAGGCTATGCTCATCCT CTAAGGAAAAGGTTTCTTATATGATCCCTATATGATGCAGAATAGACGTC TGCGAAAAAGAATAATACAATCAAAATAAGTCTGTTAATGTTTTTTCAAC ATTCTCGACTGGACCCAACTTTTCTTTACCTTTGAATTGTAGAGTCAATT TAGTGAATGCTTTGGGCAGAAAACCGTTGACTCGTTAATTGTTAATCAGG GACTGCGCCTTGCGAAGAAAACAGGAATTTTTTAAATTAAAGACCAAGGG CATCATTTTGGGGCAAATTGAGTCTGAAACAGGGCTATTTTGAGCACATT AGGGAGTCAAAATCCAAAATTTCCTCCTCCTTAGTTTGGCCACTTTACTA TCAAAATCAAGGGAAGGGCCCTGTTGATCTGATTCATTAGATGATAGATC TTTTTAAGCCACGGTCTTAAGGAATTTTTAAAACTGAAAAGTTTCATGTC AGCGCAAACTCTGTTTGCGCCTTTCCTTACCAATACTAGATATTTGACAA CTATTTGCCATCATACGCATCATATATCATAACTTAATTATTAGCNCTTT GGTCTTAAGGAATTTTTGAAACTGAAAAGTTTCATGTCAGCGCAAACTCT GTTTGCGCCTTTCCTTACCAATACTAGATATTTGACAACTATTTGCCATC ATACGCATCATATATCATAACTTAATTATTAGCAGCTCAAGACTTCATAG CCATGTATACAATGATGCTAGTATTTGAAGGGAAGCTGAACGGCTGAACG GCCCGCTGAAAACCACGGATGCCAAACTTATGGTTTTCAACTCAAAAAAT TATTTTAGGCAAAGTGGCTTTGGATGGGGTCCATATCATCTACAATATCA ATGATTAAAAAAGGCTTCTGGAGCAAGAAGGAAAAATCGGTGTCGGTGAA AAGGATAAATTCTGTCGGTTTATCGGTGAGAGTAGAGCAATTTTTGAGCG GTTTATCGGTTTTCGAAAGTCCTGTACGCCCCCCTCACAAGAAGAGGGTC CTGAGGGGGGGGGGTTTCCGGACCCCCAGGAAACTATGTTTTCCTAAGAA ATCTCACCACAGCAAATGTGCTGCCAAAATTTTGTATATAATCCAAGATG GCGGACAAAAAGCGAAAAGGTCCATGTAATATGATATTTTTATATATCTT TTTCTAAATTCCCTTTACAGGCATGTACAAAGACAGAAGGTGGATCAAAC TGTTTGACTCTTTATTTTGTGTTCTCAATGAAAAAGGTCAGGTAATGGGT TTCAGACTGGTTAAAGGAACTAAATTTGACCTTGTTTATGACATTTTCAA AAAACTGGCTGAGAACGAACCACGCCACACTTTATTATCATTGACAACTG TTGTTTATGGGTAAACAAATTAAATGAATTATTCCCTGGTGTTGCTGTTA AACTAGATCTGTTTCATGCCATAGCGAGATTAACCGGACAGGTTTAAAAA AAACACCCATTGTTTTTTGACTTTGTAAAAGAACTGGGACTAATATTCCG AGAAATTTCAGATTTTGGAGAGGTAAGGAAATTGCCTACTCCAAAGCCAA ATGTGATTTTAGAAAATCTTGAAAGGTTCATCTTGAAATGGTCAGATGTC AGTTTCAAAGGTTGGTTTATTCTGACTCCATCCTTTAGTATGGAAATTGA AAAGCTTAAGAAACATATTAACTTAGGGTGTTGCTCTGATATTCCACCTG GTGGTGGCACAAACAAAAATGAAAATCTACATAAACAGCTGAAAAGCTTA GTTTGTAGAGGAAAAATGAAAACTGAGACGGCAACTGCAATTTTCTCTCA TTTGTTTTACATCCACAATTCTAAGAAGAATGGGGAAAAGTATGTACACC CTATATTCTCTAAGGGTGAACCAAGAACGTTGCCGGGAAGTGCATCCACG TTGGTCATCAATAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00037363TCONS_00037363Clytia hemisphaericatranscript
TCONS_00037362TCONS_00037362Clytia hemisphaericatranscript
TCONS_00037361TCONS_00037361Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00037362-proteinTCONS_00037362-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001617supercontigsc0001617:51666..55479 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.11 1.22 0.79 0.43 1.94 1.85 1.56 2.97 1.05 0.9 1.33 0.94 1.2 0.5 0.56 1.45 0.58 0.9 0.34 0.28 0.52 0.21 0.17 0.88 1.32 1.39 0.2 0.45 0.09 0.06