|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037363 ID=TCONS_00037363|Name=TCONS_00037363|organism=Clytia hemisphaerica|type=transcript|length=1240bp
TTGTAGATTTGGACCAATATGTTTGTGAGCTAAATCAACAAGTTAATAAT
TATCAAGATGAGGCAAATCACAAACAAAAGGATTTGTCATTATTGCCAAA
CAATTCTATTTTTTTACCCTTTTGAGCAACTCAAAGACTCAGAATTTTTT
TACTGTCCACATTGCAAAGAAGATACTGGGAAAAATGTACCATTAGACCC
ATCACTAGGAACAGAATGGGAATATGCTGAATCATCAGGCAAAGAACCTA
GATTGATTTGGGACATATTTTGGTATTGTGCTCTAGTTGGTAAGATAACC
AAGTGTTGTAATGGGCATTCAATTACATCGTATCACCCTGGAATTTTGCA
ACAAATTTCAAACTACCTATTCTTACTTTCTCACAAGCGTGGAATGACTA
AGTCAACATATGACCTGATAATCCGTTTAGTTGAACAAGTCAACAATTTT
AGTAGCATTGAAAGTATATTTCTTAGCAGTTTCGTCGATATCGTCCATCG
AAAACTAGCTCTAATCAACAACACCAACATGCAGACATCTATTGAATTCA
TTGAACAACTGAAGCTGTTTACTCCATCACATGATTTTATCActtcttgt
tttgttttcaattttgataactACAAAGATGTTTATCTTTCTGAAATGGA
TAAACTCACCTTCATTTGGCTTTCAGGAGACCACACGTTTCGTGTGGCTG
CGAATATAGGTAAGTAgcaaaagttacaaagaaagggGTAGCATTTTCAC
attgggggatgccaagaaggggggggtACGGAAAAGTGGTTTGTCGGTTT
CAGCCTTATTTTTGTCGGTTATCGGTGAACGGAAAACATTACGGTGTCGA
TGATTGAGCTTTTTTGTTCGGTTAATCGGTGAGTGGATCGATATTCAAGC
GGTTTTCGGTGACAAGTTAAGTATAATGGTTTTGGAGAAATAAATTATCC
CAAGAATCAAAAAGTAAATTAACTACTAcatgtaatttttctttgctcgc
ttcgcttgcATAAAATACTGTATCAGTGACCAATTGAGTCTTTCAGATTT
CAAGAGTGCATAAATGACCTTTGTTACAGGAAAACTTGGAATAATTCTGC
TAGATTTAGTAGCAGTATTGGGGAACTGCCAGCGGCGGCCGATTTTTCTA
TGGAGGGGGACAAGGGGCACCAAAAGGCGCCTCTGACATAGGGTCCACCC
CCCCAGagatttgggggtacctaaaaagaaaattctaaaC Run BLAST on NCBI transcript from alignment at sc0001617:54240..55479- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037363 ID=TCONS_00037363|Name=TCONS_00037363|organism=Clytia hemisphaerica|type=transcript|length=1240bp|location=Sequence derived from alignment at sc0001617:54240..55479- (Clytia hemisphaerica)
TTGTAGATTTGGACCAATATGTTTGTGAGCTAAATCAACAAGTTAATAAT
TATCAAGATGAGGCAAATCACAAACAAAAGGATTTGTCATTATTGCCAAA
CAATTCTATTTTTTTACCCTTTTGAGCAACTCAAAGACTCAGAATTTTTT
TACTGTCCACATTGCAAAGAAGATACTGGGAAAAATGTACCATTAGACCC
ATCACTAGGAACAGAATGGGAATATGCTGAATCATCAGGCAAAGAACCTA
GATTGATTTGGGACATATTTTGGTATTGTGCTCTAGTTGGTAAGATAACC
AAGTGTTGTAATGGGCATTCAATTACATCGTATCACCCTGGAATTTTGCA
ACAAATTTCAAACTACCTATTCTTACTTTCTCACAAGCGTGGAATGACTA
AGTCAACATATGACCTGATAATCCGTTTAGTTGAACAAGTCAACAATTTT
AGTAGCATTGAAAGTATATTTCTTAGCAGTTTCGTCGATATCGTCCATCG
AAAACTAGCTCTAATCAACAACACCAACATGCAGACATCTATTGAATTCA
TTGAACAACTGAAGCTGTTTACTCCATCACATGATTTTATCACTTCTTGT
TTTGTTTTCAATTTTGATAACTACAAAGATGTTTATCTTTCTGAAATGGA
TAAACTCACCTTCATTTGGCTTTCAGGAGACCACACGTTTCGTGTGGCTG
CGAATATAGGTAAGTAGCAAAAGTTACAAAGAAAGGGGTAGCATTTTCAC
ATTGGGGGATGCCAAGAAGGGGGGGGTACGGAAAAGTGGTTTGTCGGTTT
CAGCCTTATTTTTGTCGGTTATCGGTGAACGGAAAACATTACGGTGTCGA
TGATTGAGCTTTTTTGTTCGGTTAATCGGTGAGTGGATCGATATTCAAGC
GGTTTTCGGTGACAAGTTAAGTATAATGGTTTTGGAGAAATAAATTATCC
CAAGAATCAAAAAGTAAATTAACTACTACATGTAATTTTTCTTTGCTCGC
TTCGCTTGCATAAAATACTGTATCAGTGACCAATTGAGTCTTTCAGATTT
CAAGAGTGCATAAATGACCTTTGTTACAGGAAAACTTGGAATAATTCTGC
TAGATTTAGTAGCAGTATTGGGGAACTGCCAGCGGCGGCCGATTTTTCTA
TGGAGGGGGACAAGGGGCACCAAAAGGCGCCTCTGACATAGGGTCCACCC
CCCCAGAGATTTGGGGGTACCTAAAAAGAAAATTCTAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037363-exon-sc0001617-1575043694:54240..55479 | TCONS_00037363-exon-sc0001617-1575043694:54240..55479 | Clytia hemisphaerica | exon |
| TCONS_00037363-exon-sc0001617-1510915933:54240..55479 | TCONS_00037363-exon-sc0001617-1510915933:54240..55479 | Clytia hemisphaerica | exon |
| TCONS_00037363-exon-sc0001617-1491911889:54240..55479 | TCONS_00037363-exon-sc0001617-1491911889:54240..55479 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001617 | supercontig | sc0001617:54240..55479 - |
Blast
The following BLAST results are available for this feature:
|
