XLOC_022045 (gene) - C. hemisphaerica

Overview
NameXLOC_022045
Unique NameXLOC_022045
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001595:46492..50270+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022045 ID=XLOC_022045|Name=XLOC_022045|organism=Clytia hemisphaerica|type=gene|length=3779bp|location=Sequence derived from alignment at sc0001595:46492..50270+ (Clytia hemisphaerica)
aCTTTTGAATTCCAGCACAATGAATGCAGCTTGGTTAGAGGGTATATTCT
ATtgatttatgtttttgtttattaACATTNTTTGTAAATGTAAGGTGATG
ATTAGAGACCTTACTTGAGTAcacttctcttttttttttttttgttcagg
aCTTTTGAATTCCAGCACAGTGAATGCAGCTTGGTTAGAGGGTATATTCT
AttgattttatgtttttgtttgttaacattctattgtttaaaacaGTGTA
ATTTCTTTTGAGACACTCAAGTGATTATTTACAAACATAAACTCATCTGA
ATCTCTCTATTCAATGACTGTGGTTTATACTGTTCTAGTAGGTACTAGAA
TTTAACAGTGTTCAAAATTCTTCCATCTCAGACAGATTTTCTCTCAGAGG
TTTTGAAAGATGCATTTCCGCGATCTCAAAAACAGAAGAATCTGGCTTAG
AGTTGCGTGTAAAGCCTAATTTTTCTCTGAGAATCTCTGCTTTGAGcact
aatttcaaaataatgattttaatATGTTATTATTTAGAAATCTCAGGCGT
AAGACCAAGAGCAGACTAGCCATCACCAGAAATTCCTTACTTACAGCCTA
CAGGTACTGCATTGAACTTTCTATCTTGCTTAATTGTTTAGAGTTGcact
gcgaaaattagttcccttaaggtaatttgAAACCATATCAACCAGACATG
TTATCggatattttgttttaaatgaaatGGCTTCTAGCTcttcattttgt
atttttagatgCCTCTTGCAAAAAACTTTGCGCGGAATGTTCAAAGAAAG
ATCTGACGATAACAAACTTGAAGAAAGAAGTAACAGCATGTATGTTTCAT
ATTCCAACCCTACCACTATTTACAGCAGCGgtccaatttaaaaaaataaa
ttgtatTTAACTAAAATATGATACAGATTTTGACCCAAAGTTGTTATCCC
CCTCTCTTTACTTGATCCCTCCAAAAAACCCCCTTTTTCTTCNTTTGACC
CAAAGTTGTTATCCCCCTCTCTTTACTTGATCCCTCCAAAAACCCCCctt
tttcttcagaaaatctTAGGGGATAGGGGATAGATAGGGGATAAGGATCC
CTATAAAGACTTTTCAGAAAAGTTTGACTCCCTGTTAAAAAGGGGGCTCA
GACTATGCAGGGTATCAGTAAACAAACCTTGTTAAAgcctaattttaata
aatttctttttagtgAAGCAGAAATTAAATCGGAATTTCAACTCATTCCA
AAAGGTAATACTATTGGGTACCTAATAAATAAACTTTGCAGCTACGAGTC
TTATTACACCCACGAAATTTCTACTAGAAAAGCTTTACCACTCACTCTTA
TTCTACCCCTTGCTTGTGCTTAATCGTAGGGGAATTAAGCCCAGAAGATT
AAGTATTATGCAGGATCAAGAACTGTGCTACAACTTTGCACTCAGATTAT
AagtctcttttttatttttttttgttgccTGTTTAGGAACTGTCTAAAGA
AAAACGTCTATTGCGAAAACCGTTCTTCCGCATCCCTGGAAATAACAAAG
TGAGtttattcttaaaatatttatGATTGACCAATAATTGgcctcttcca
gaaaaaaaaattgtttatggGGGTAGAGGATTATaacaattttcctttgt
ttttagacCCCTAGGACAACGGGTTTCACCCCCCCCCAAACAAGCATCAC
CTGACCCTCAGACCCAAAATTACCCCTGGGCAGAGCAAATCTACACCCCA
AACAATTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTCAGATGGAGCT
CGTCAAAGGAAGCGGGATCTTCCTGAAGAAGGACACCATTTGTCAGGCGC
ACCTTCTTCCAGAGTTTGGAAAATGTTTTCCTTACCTACTTAAAAGGTTG
GGTTTCtttattctatttttatgtttttgaagGGGTGAgaaatttctaat
aaaaaatctgCTTGTTATCCGCTAAGATTTACCTTGATAAAATGTGCTTT
ATTTCCTTCTAGATTGTTTTCCCAACGTGAGCTGGTTACCCTGAACCACA
CAGGGGTAAATGGGATGGATGAATTTCCCAAAGATTTGTTGAATGTCATT
CAAAGTGAGTTTTAAATTTGTTATTTCATATGAACCATCAGTTTCTCTGT
TCCTAAAAAGATTTTAGTGATGCATCTGAACTAACCATGGAATTCAGTAG
AAAAATTAGCCTATGGCTCACAAATTCTTTTGGATGGATTATTACAATGA
TATtgtgaaatttaaaaatcttaacAAGCACCTGTTATCAATGGTTTCTA
AAAACATGGATACTCAAATCTGACTAACAaataaatttgagatttttttg
attATGCTATACAATAaggttttgattattttatgttttcagTCTTTTGT
AAAGCAAACACATACGACGTAGTCAGTCGCTACGATAAAACAAGGACTGA
AATCGACAAAAGCCGCATTAATGAAATGTGCACAAATGTTGTTCAGTCTG
CCCGCCACTATTTGAAATTCGGCAAAAAGTGGCTAATCCaatctgaagaa
gaagaagaagaagagaaaaatgaaCCGCACAATGCCACACTTTAACGTTT
TGCTGTTaattaattttggcggtaaCTTATTTTGGAAAACTTGAACttct
acttttttttctttctcagcAATAAAGACAATGTTAGATAGcaagaaata
aaatttattttttgagcgtccaaacaaaaaaaaatcaaaaaaaatagttt
taagtAGTAATGCGAAAAGTATTGTCTCGAGGACCTATACACTACACCTT
CCCCGCAATACAAATTCAGCGAGTGACAAAGTTTTCCTCAACTAATTTTT
AACGAACCGTCTAGTCTAtagtttgttttaattttgaaagtaactgtatg
tacatgtttttttttataagcaagtgtatgccccttgatCAGGCTCGTgc
atgcttaagttctcaaagcatccaggcatagattatgcttattatatgct
tatgaatcatgcttataattcaccccgagccaagttttagttaaatttta
gaaattttgtaaaaatttgttcagatttgggagcagtggtagctgtggaa
tgtcttttttttacttgacctcaaccaaaccattttaaactgataaaaaa
tgataatttgaaaaatatttcagactgac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00037247TCONS_00037247Clytia hemisphaericatranscript
TCONS_00037248TCONS_00037248Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00037248-proteinTCONS_00037248-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001595supercontigsc0001595:46492..50270 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.27	0.21	0.69	0.16	7.79	4.89	3.78	5.14	3.56	3.51	2.24	2.61	2.84	2.19	1.38	1.16	3.22	2.84	1.84	2.96	3.44	1.93	1.54	1.37	1.64	2.55	3.05	1.55	3.8	3.67