XLOC_022005 (gene) - C. hemisphaerica

Overview


Name	XLOC_022005
Unique Name	XLOC_022005
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0001590:30263..42954+

gene from alignment at sc0001590:30263..42954+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_022005 ID=XLOC_022005|Name=XLOC_022005|organism=Clytia hemisphaerica|type=gene|length=12692bp|location=Sequence derived from alignment at sc0001590:30263..42954+ (Clytia hemisphaerica)
TTCAGCCTACAGACATCACTTTGTACAAGCAGACCAAAGCAAAAATCGGG
CGAAGTCGTGTCCGCTCATGGGCCTGGATGGCGTTCACTAATCCCGCCCG
TTTCGATGGCTTGAAATTATGTCATGCTATGTTATGAATATCCGTTCGCA
CAGTTCGGCAAAATGAAACAAGACGTCATCTATTCCGATGAAGAAATGAA
GTAATGGTTTCATTCATTACGTAATTCTTCAATCGACGAGAATGGTTTTG
GTTACAAAGAATGACTGAAAGAGAAGAATAGAATCACTCACTGAGCTCGT
TCTCATTCCTTAAATTTTGAGACCTAACTTTTCATGATGACGatgcaata
aaaacaattttttgttataGATAGTCTAACATCTCTCTGATAACATCGAA
TTCCTTCCTGGAATTTTTATTGGAAAATCCATACATTAGTTTTCTGACTA
AATTGAGTACTTTAGCCCTATATGCTTCGATGTGTATTTTTGCTGGAAGA
AGAAAGTTATTTCAATTCGTTCGCCTTTTTAGATGTATTTGAAAGACGAC
ACAGGGAATTGGTCACAAGAAGAAACCAACTATTTGCTCGAATTATCCAG
GTATTTCTACATTTTCTCGAGACATTCAAACTCATGAAATACGCAATAGT
GGTGTAGTGACGATCATTTTTGCCCTTCGTACGGAAGGTCAGAGTTCGAT
TACTACTCGGTCttgtgattcacttggcaaaCGAAGTTCCTTCCCCTAGG
GCAACCCATGCGATATGGCGGGATACTATACTCTGATATGATAATTGCAC
ATCATTGCACACGTGCAATTGAATTCCCATTGCAACTAAGGGACCCCTTA
CAGACACgcttcattttgaggaaaaaagcatgaaTTCATTCTATCTGATA
ACAGTTCACTGATCAAACATCAATAAACTTtgttaaatatcttttgattg
aatgaatatttttgaaacattttttcacagtgatgatgatctaagatcgA
AGAGTCACTCCTCTGAAAATGGTAatcataccacatttctacaagaagtt
gatttttttcttcttcatttttcattttcatttgtcttttttttcccaaa
ttttttacttgataatattccactcacaaatatctttttaaggagcataa
aatcgcaacttgattcgaattctatcaaaagttacagaccatttttgtct
cagctgcaaattattttgagacagactttaactCGTATGCAATGTCATAA
TACTGAAAGTGATGCCCATTGTATAGAGTTGACATGTCAAAGATAACTCG
ACGCtctcttttgtcatttttaaaaatgagGTTTGCACCCCAGAAAAATG
CATTATTAGAGAAGGAACAACACCAAAAGACACTCTGACCTGCAGGAAGT
GCCACCGAGATGTTCATTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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aaattacaaacaaaaacgcaaagattcgagattccagtccaatatatatg
cgtgaagctatgagtgcctcctcgtcgctgcgctcctgcgggggcaatga
tgcaggaaatataattggatatgaattgacagtagaaaatGGCACGTCTT
AAATAGCAAATGAATATACTACAGGTGTTATATGTATTATATGTTATATT
TGCAAATCTGACTTGCGATTCAAGGAAGTGCTCTATACCATCGGAAGAGC
GGCATATCGGTCAAGAATagagacaaatttatttttcgatACTCGCAGAG
TTTCGTGTcgtttcaggcagtcttcagtcGTGATTTTAGtgaagactgcc
tgaaacggcacgaaactccGCGAGTatcgaaaaataaatttgtctctATT
CTTGACTGATATTATATATGTTATATCTGTTATCATGCTATTATGTTTTT
CgttttcggtagccggtaattttcTCCCCAACTCAAAAATTTTACTCCCC
AACTCAGGACAAGAAAGGTTTCCAAACACAAAGCAAAAACGGGATTTTGA
AAAGCGAAAGTATATAAGTTGTTACTGCCGTGTGTAGGCAGCACATAGGA
Tgtaacatacacgtttttttatataaggaacacgtttataaggaactcga
ggctgaaaatggtccaaaaaataaggaattatTAAGGAATTATCTCAGGC
TGAGaacaagaaaacaagttttaaggaacagtaagagatggttatccaaa
cttagcagctatgtaaataaggaactcgataaggaactttgagactgaaa
ttctctgtaaaaataaggaactccaggctcagagcaaagttgaggttcct
tataaaaaaaaacgtgtattggcaCTCCTTCGCTATGTTTCCCAATTGTT
TTATATCGATTTTTAATAAGGATAATTATATCGCTAATTTTCCCAGTCTT
AGTATAGTCCTTTCAATCCCTTGAGCATTGGGTCTCATTATCTCGCGTTT
GGGcttctttgtattttatttgCTCTTTTTATTGTCTCTATTGATTCCTT
AGGGTTGGTTACACATCTCTTGGgaaattaaagttttttctgTAGTGTTT
TGACAACATTTCTAATTTGATTATGAAATCATTTTTGTAAAGTAGCTACT
GTGTGTGCATGTGAACTGACGTGTTGGGTGGTACCGTCTAGTGGTTTTTA
GACAGTGATTTTAGTAAGTATCTTTTGGATTTTGGTTTTGTATAGCCTCT
CTATAACAATCACTGTTTGCTCCTAGCCTTTATTTTTCTGTCTACTTATT
TCTTGCCTTTTTTTGGACTTCGACATTTTCAGTTTCTAACTCAAGtgttt
tttagattttgttCGCATTTTCTGGTATTTTTGTGCTTATTTTAGCTGTT
TGCCAAAGATCATTCCCGTTCAAAATCCTATCCTATTCGTTGGGACCTTT
TTGGTAATCAGTCTGGTGGGGAAAAGTTCTTTTTGCCCAGTTCTTTAATA
GTATACATTTTTTCAGGACGTCTACGCCAAATAAAATGACTTTGCATGTT
TGCTAGTTGTATACTTGTAAGTTCTATAGAGCGTTGGGTTCTTGTGGCac
gattttccaaaaattttcttccttgTGTTAGAACTTgtcgtatttttttt
ttatcttatcttTATATGCCAACACTTTTTCTAGGATTACTGTAGTGTta
gtctggagaccatactctgttacaaaaatatttctatcctgttaaaatcc
caacaacttcactgaaatacagagtatggaattattgactcgattcaaat
cacttcaaatcacaaaagaaaaaaccgttattttttcaaaacaattcaaa
agctcGCGCCACTTCTTGAAACAATANNNNNNNNNNNNNNNNNNNNNNNN
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NNNcatacttttgtttatcaaatcataacaataagatattagccaatcaa
attctgcgattaattcttgcatcttgtataattcccggctacttctgtct
atactttgatacttttttgaaaccacatagacagagaagtcgggtctccc
agctactGTAGTGTGAAAGTCTTTTGAATGATTTTGTTACTTTaacaact
ttttcattttttagagaGTAAAGTGATGGAAGATATTAAGCTACGTTACT
ACGATGTCGTGCGGAAGCTTTTGATCGCGCGTACACCGCCTGGTCAAGAA
ACACAAGACCTACCGCCAGTCTATGATACGGAACAtgagaaaatacaaaa
agaacAATTGATCAAACTTTTCAATCGAACTCCTGAAGAGGTTAGTCACA
GAGCttaggaatttttgaaaaataatttttttgacttttcaaaacTAGGT
CGGCTCAAAACCAGCttatatattttcataaaaatgctCTTTCATATGTT
AGATACGAGAGTTTCGGAAACTCATTCCTTTTGGAAATATAGACCGTCAA
AGTTAGGCCCCTTTTAGGAGCACCCTGTTCCTTTTGTGTGTCGATACGAT
ACCCATACATCGTCAATACTGTACGTCTTGACTTTTNCTACGTTACTACG
ATGTCGTGCGGAAGCTTTTGATCGCGCGTACACCGCCTGGTCAAGAAACA
CAAGACCTACCGCCAGTCTATGATACGGAACAtgagaaaatacaaaaaga
acAATTGATCAAACTTTTCAATCGAACTCCTGAAGAGGTTAGTCACAGAG
CttaggaatttttgaaaaataatttttttgacttttcaaaacTAGGTCGG
CTCAAAACCAGCttatatattttcataaaaatgctCTTTCATATGTTAGA
TACGAGAGTTTCGGAAACTCATTCCTTTTGGAAATATAGACCGTCAAAGT
TAGGCCCCTTTTAGGAGCACCCTGTTCCTTTTGTGTGTCGATACGATACC
CATACATCGTCAATACTGTACATCTTGACTTTTCGTACTTTAAATATTTT
ATGGAATTAGCTAGACTAGGGTTACCAAGTTAGTTAATTGGGTCGGCCAG
AAAAGCACTTTTCATAGCCTACGAAAGGTGACTTTTTTTTATATCTTGTT
ATATTACAAGCTTTCTGTACATATATAATGTGAAGTGATGAAGTAATAAA
GTACCTGAACAGCAGTAAATTCTTCGTGAAAAACAGTTCCTTCAGCAAAG
aatgcttatacttactatctCAACAAAGTTTTTGCTTCATTAAGGTTGAA
GAGGAGGAAGTCCTGGTACAACAGCTCAAGAAAATCAAATCTCATAAAAA
GGAGCGCGAAAAGAAGTTGCACAACTTCAACAAATTGATTACAACAGCCG
AAAACAAANAGGAGCGCGAAATGAAGTTGCACAACTTCAACAAATTGATT
ACAACAGCCGAAAACAAACCGTCTTCTCTATCGCTTCTTGGATCCAATGA
CAGGAGTGGCATTTATCGTCACATCACACGACAGCTGATGGACACATTAT
TAAGTGAGTCTTCCCCTCCCCTCCTTTGTTACTTAAGAAATAATTCTCTC
TTGTTACGTTCTATGTATCTACCAATCTCTCCAACCGCTCTGATTGGTTC
AAAACTGagttaaaaaaagttataaaccTTTATCGCACAACAATCTTTCT
TAGAGTATATGGCCCCTAAAACGGCGttattaaaatgaggattctgactt
ttagattttacagaattagacgatttttgtttactttgaaaaaatgacgg
ttatacttaaaaatgagtatGTTTTGGTTTGAGACAGctaataacatatt
tgcgtctaaaggaaacgggcttttccaaaaaaaaccgtatacgccctgtt
gaggaggtccatttccgttccaagggggtaaggtttgatgtgtggcggaa
ttccacagggagatacaaaaatctgtcaaaaataactggaattccagggg
gggAGGCCTTTTAAATcgtactaaaattcagaattccagaggggttcaAA
CCTGAAATTGTCTGGAATTCCAGAGGGTTACAtcatttccagccacaaaa
tgatggacctcctcaacagggagtatacggtttttttctggaaaagccca
atattaCGTCTGAAGGAAATAATTATTACAACgcaaaaattagataaaaa
tggCATATAGTCCactaggaaactttctacacctaatgcagATACTTTTG
TGACTTTATGAGTAGAATATATAGTATCTTAAAGGTCAATCAGTCTTTTA
ggggccctagaatcagcattgataaaaccgaaaattcattcattttttct
ttgcatgaaaaataggctgattatgtcaaaaaatttagaaacaagtaaaa
aacatttaaggctcaaaaggctgatttcctaagaaacattgaggctgctt
ggtaaaactagtttcttaaaaaaaaacgtgtaatttatATAAATCAAAGA
GTCATAGTTTTCATAAACTACGCTAAGAGCTCTTCGTTGAATTTTCTCAA
TTTGTTTGTTGGTGTGTTTTACAAAATTCATCCAAATCAATGGACATTAA
ttagaattagaaaaaatataGGCGTGACACAAGGCCTTTgctgtttttaa
agaaatgaaGGGGCGAATGCgtcgaaagttcgattttagcctggacgtca
attgataattgcgcgcataggccccgacaaagtcaaATCTTTTCAATCAG
TTGCCTTTTAAAGGCCTATTTGGCGCTGGGTACTGGGCCAAAAAAACGTA
CTAATGAATTCTCGGAATAACGGCTTGAGAGCAAATTTCTCCCAACTccg
ttggaaagataaaagTTCTCAAATTCAGACCCGGTGTGAAGTTATACTTT
TTTCTTAGCCattctgttgaatttcaaaacttgaccggttcactgagaca
ggggtgtggtAGAGGAGTAGTCTATTTTGTGtctattttttcattgtttt
agaCCTATATTTTGATATAGCTATGTTATATATAATTCCTCAATTGGTCT
TACATTTCAGTTCAACCAGTAAGTCCAACATTCAAGTgaaatcaaaaact
ttgaggacattaaagatttttattgttttggtgCATATCTAAACACGCTG
TAAGTTCTGTGCTTAATAAAGCTATGATTACTTGTAGTCTTTAGAGAATT
GTTCGTTATCCTTGAAGCTTTTGCCAACGCAACAATTTTCTTGCGATAAA
AATTACAAACGTTCATTTCTTCCAGCACCAGAAGAGTTTTTTGTCCTTCA
AATCGTTTTAAAAAACTAACATGTCCAAATCTAAATAAATACTTTACTGC
ATTTTTTATCGTTTTAGAGGCTGTAATAATCTATATCTCAGGCGGACAAA
CATCGAGGAGGAACGAGCCGCAAATGGCATGAAtttaataagaacaatga
ggcatTTTGCCAAAAGTGAGAAATGTACCTcaagtctttttttatttgag
tatTTTATATCGTTTTAGAGGCTGTAATAATCTATGcctcaaacaaacaa
aaaagaaggAGGAGCAAGCTGCAAACGGAatggcttttataagaacaatg
aggcggTTTGCCAAAATGAGTGATGTactgaaagtcttttttttatttaa
gtattttataTCGTTTTAGAGGCTGTAATAATCTATGcctcaaacaaaca
aaaaagaaggAGGAGCAAGCCGCAAATGGCATGAATTTCATAAGACAAAT
AAGAAAGTTTGCCAAAGTGAGTGATGTACTGAGAATCTTCTTTTGAGTAT
TTGAGTTTTTTATCATATGCAACCAGGTTTTGTAAGTCTAGTTGCTCTTG
CTCATAACCTGATCGTATCAGTAAAAAGAGTTTCTTCGAAGGCCAAACAC
AAAATAACGGTTTCTAGTCAGCTAGCTTCAGTGTCGAGAACTTTGCTTAA
GGATTAATGAAAACCTTGTTTATGTCATGATAATTGTCCActtatttttt
aaggaaaaacatgGCTTACTGTTAAAGGGCAACTCATTCGATTTGGTCAG
CCTCTTGAAGGAGGAGGGTAAGAATTTTATTTGGTTAAACTTTTTTGGTT
GCTACTTTATACGTCTATTAGATTTTCAGGGTCCACGTCACGGGGCAGGG
GCAGGGGGACCATCTTTTTGCAAAACGAAAATCTTTTGGTTGCGTGTTCT
TAGACTCTATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccaattc
aTGGCGTGGGAcctgttgttttgattttgctcaACTATCGTgagtttcat
tttttgaacaATGAATTACACAATATTTAATGAAAAGCGAATTTCTCTGC
AAAATATGAAACAAAACAATGGATTTTTAATTACTCTAATTAACTTTTGG
AACGTAGAGTATCAAATCTAAGTTTTGACATTAAACTTAAGACTGAGAAT
ATAACCAAGAGGTCAGTGACCCTGGAGGCAGTTTTTCAATCTTGGCCAAG
CTAAATATTTTGATCTAAGTTTATTTTTTAAGtagcattttcttgaaatt
cagTTCCATTTTTCAAGGACAAATGGCTAGTATTTAACGTATTTGGTGTC
acttttgtcaaaatttcaaaaaatgaaggtgcTTCAAAATGTCTTTCATT
GGGTTTGACACAACATTTTCAGGATAATGAGGGCTTTAAAATCGACCCTC
TATGTATGTAGAACACTGATGTTTTATTCTTGGTGTACCAATCTtcaatt
gattgaaaatttgacccAAAGTTTAGACACCATCATTTATTgatgttttg
caaaaaaaatcaaaaccaagcCGAGACAAGCATTGAATTCGATTTAGCAA
TGTTGATATATTCTTAGACTGTCTATTTGGAAAGTTTCCTGGTTGCAAAC
GCAATGGGCACATGATTAAGTGAGTCTTCCCTTCCCCTCCTTTGTTACTT
AAGAAATAATTCTCTCTTGATAAGTTCTTCTCTGTTCTCTGTATCTATCA
ATCTCTCCAACCGTTCTGATTTTTTTCCTAAACTTTTACAGTAGAAGctc
aataactcgaacaagcACGGGGAACTTTGAAATTTGTTATGGgttaaggt
ttataaggcattgttaactgaccataaaacttgttcgagtaaaAGAGATT
CgatttatagaggttcgaattcaAGAGACTGTATTTTTGTCGATCTCAGG
AAAGagaagaaactgaaaacaaAGAACAAGAAACGGCGCGCCGAGTCTAC
CACAACTTCCAGCGCATCGAGCGCGACTTCCACCACAAATAN

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00037190	TCONS_00037190	Clytia hemisphaerica	transcript
TCONS_00037191	TCONS_00037191	Clytia hemisphaerica	transcript
TCONS_00037192	TCONS_00037192	Clytia hemisphaerica	transcript
TCONS_00037193	TCONS_00037193	Clytia hemisphaerica	transcript
TCONS_00037194	TCONS_00037194	Clytia hemisphaerica	transcript
TCONS_00037195	TCONS_00037195	Clytia hemisphaerica	transcript
TCONS_00037196	TCONS_00037196	Clytia hemisphaerica	transcript
TCONS_00037197	TCONS_00037197	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00037191-protein	TCONS_00037191-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0001590	supercontig	sc0001590:30263..42954 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.32	17.01	20.48	23.99	8.43	6.34	6.41	8.69	7.06	6.84	9.2	9.78	6.14	7.63	8.03	10.25	10.87	10.51	8.43	7.68	10.99	9.44	10.44	11.32	15.73	16.36	3.53	7.31	6.19	6.16

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XLOC_022005 (gene) - C. hemisphaerica