XLOC_021932 (gene) - C. hemisphaerica

Overview
NameXLOC_021932
Unique NameXLOC_021932
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001569:9267..12744+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021932 ID=XLOC_021932|Name=XLOC_021932|organism=Clytia hemisphaerica|type=gene|length=3478bp|location=Sequence derived from alignment at sc0001569:9267..12744+ (Clytia hemisphaerica)
CATATTTTCATTCTTTAACGGTTCATCTCGCTGAAGTCATTCGTATCATC
GCGCCCTCCTCCCTTTACACTGAGAGCGAAGAGGGTATTTTGCCATCATA
CGCGCCATAGTAAAGTCGACATCAAACAGGACAAAAGAATCAGTCAGGGA
TGTAGGTTTAATAAGGTGAGCGATTAAAACTGTAAAAAATTGATTCAAGC
TTTTTCATTCgtaattcaatgtttaaaaattgtactccaaacccatcccc
actggattttttaaccgtggaacaatagaatttctatccccatcgggatt
tcaataggaattttcatacccactgaggaaaaaagttccagtggggctgt
gagacaggggtgttctaaagttcataacgtccatataacgttagataaac
gttgaaacaacgttttgtgccagcgTGGTAAGTTTTAGCCATATTTCCAG
GTGGGAAAAGTCTGTAGAGAGTTGTATCTTGGCGCTctttaaaactctac
ttttaaaaaactttccAGATACCAAACAGAGAAAGAGTTTCAACAAAACT
ATGGGACACATGGTAACTCGAACAACAAAGAATCAAAAATTGCCCAGTTC
CAAACACTTATCAGTAAGTAAATGTTTTAAACAATCGACGAAGNcgtgga
acaatagaatttctatccccatcgggatttcaataggaattttcataccc
actgaggaaaaaagttccagtggggctgtgagacaggggtgttctaaagt
tcataacgtccatataacgttagataaacgttgaaacaacgttttgtgcc
agcgTGGTAAGTTTTAGCCATATTTCCAGGTGGGAAAAGTCTGTAGAGAG
TTGTATCTTGGCCTctttaaaactctacttttaaaaaactttccAGATAC
CAAACAGAGAAAGAGTTTCAACAAAACTATGGGACACGTGGTAACTCGAA
CAACAAAGAATCAAAAATTGCCCAGTTCCAAACACTTATCAGTAAGTAAA
TGTTTTAAACAatcgatgaaaaaaaataaaatagtttgatatcatttcct
tattttttttatgGTGAAAAAAGGTTCGTCAAGAATGGCcacagaaaaac
tttttttcggagTAACTTAAAATCTTTAGTATTTCTTTCCTCCCTAAATT
TGCCTGGTTTGACCCTTTTTCCGAAGAGTGTTATGTAAAATTTAGTGGGT
GGTACCTTgcttttccttttgaaaaatagGACTGTATTGGAAACTTCCAG
GTAGTTTAGGGGTAGTGTAACtgcacacacccctgtctctatcTTAGGGA
TAAAATCATGGCGCTAAAtacaaatggggatgaaaatatCTTGCTTTTAA
TGGGTGGGGATTTTAAATTATATTGTGTACAGCTTAAAAATTCCAGTAGG
ATAGCCAAAATGTCAGTGTTTTTTTCCAATGGGGATGATAAGTTTtctaa
tggggatgaaatttcatGGTATTTGATCAACGGGGACGATTATTTTGCCG
ATTTCTCTAGTGGGTAGATCCTACCGGGTctttgatacaggggtgtttat
aTGAAGTCAGATTTTATATTTGTACAGGATACAAAAGGGTGATGGTCCTT
ACTCAATCTCCATAAATACGAAAGTAAAGTAAAGATTTTCTATGCATCCC
CACTGCCTGATTTACTaaagaaaatcatttcatttCCAGCAAGCCACCCA
AATTCAAGATTCCATCTCGGAGAGTGTGATAAAAGTTGGCCGAAACATCT
GAAGCGCATTGTGGACTATGTGCTGGCAAGAAGCTGGTGGAAGCGAGAAG
GAAACTATATCGTTTTTTTTGACGGGGAGGATGAATTTGAGAACAGAATG
GAGGGACCCGAGTTATTAGATTTCAAGACAACTAACCTTGAGAAGGTAAA
CCCTTTTAAAAATCAACttgaagaaaattaaaaaacaaaaaatgttttat
tgacATCAATTCTATAGGATTTTTGTTTTGCGTGTATCTCATTACAATAA
GATACCTCTCACCACACTAAAaccccttttttgttttttagccaattact
caatttttaagCAGACCCGAAACATTGATTAATTTGAATACAATATGAGT
AGTAAGCTTGTTTTTCAAAGGATGTAGAATTTGGCTTTTTTGGAAGGATA
TTGAAAAATCAAACAGAATTTTTACCCCATTTTTTTCTAAGGTCCAACAA
ATCCTTACTAGCCAATGGAAAACCGTTCCAGAAGATATTTTGGAAGAGTT
GGTTTGCGAACCTGAAATGAATGATGACACAGATGACAATAATGATCATA
ATGAGAATGAGAAAAAAGGTGATTGTCCAAATATTGCTTTCAATAATTTT
CATATATGCTATCAAAGtaatctaaaattttaaatcagACCTTTCCAAAT
CAGATAACCATTCAtctaagaagaaaaattacacagtatagaccttttca
taaattacgccaCGAACAtaacttgcctcgttttgactaattaaCTAATT
TTAAGCGGAGTTCATTAAAACTACTCTCTATTCATGAAGAAagcatttaa
tgtctcaagggacaaaATCACTATGGTcattgtttgaaaacgaggcaagt
gatgttggtgacgtaatttatgaaaaggtctattatgttAAGTTATGAAA
ATCTCTTTTAGATTCAGAGGAAAATGACAAACTTCCAGAGACAATGGAAA
CCAACCACTCCGAGGATGTCCAGGAAAAGCGTATGGGTAGGAAAAATTTA
AAAGCAATGCAATGCccatcatttttttgtttttaagggctctgaccata
acaaaatgtacaaaatttcTAGGGTGAGGGAGACTATGTGTATCCCTCAA
TCTTATATTATTTGGAAAATCTTACTGCCCCATAAACCCGTGAGTAATAT
CGTGCTttgaagtaaaatatttttcaattattaCTTTATAGAGTTGAATA
TGATGGAGGCGACAGAAGAAAATTTCGTCAATGAAAATATGGCATCGACC
AGTAAAAGAGGTTGGTCTTAGCTTTGGCTTTTCTAAACAAATTATTTATT
TCATGAGCTATTAACATTAGTTTCCCCACCGAACACAAATAGttaaatca
tttatttttaacTCATTTCAGAAGAAAGACTCCCTGATACCGACCTGTCA
TACCaattgaaaacgaaagttggTAAAAGTTTATATCATGTCTTTGGTAT
GACtaatgaagtgaaaagttttgatTCCCATCATCTCAAATTCCGTGATT
ATAAGTACGAATCAGATCGTGCGAAGTGCAATAATTTGATCACAAAATTT
ACGTCAGAATTGAAGAATATTTACCGTGATTCTGCAAAACAAGTTAAGGA
ATGGGAAGACGCTTACTTAAAGAAACATTTGACGGACCCGCTTTTTAAAT
ACATGGATTCTGATATGAAAAAGATTTACatgaaaatgataaattctAAA
TCACTTATGAAACACTTCAACATCTCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00037091TCONS_00037091Clytia hemisphaericatranscript
TCONS_00037092TCONS_00037092Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00037091-proteinTCONS_00037091-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001569supercontigsc0001569:9267..12744 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.04	0	0	0.22	0.26	0.15	0.1	0.24	0.38	0.16	0.21	1.6	1.11	0.02	0.05	0.03	0.06	0	0	0.08	0	0.05	0.04	0.3	3.76	0.05	0	0.04	0