XLOC_021768 (gene) - C. hemisphaerica

Overview
NameXLOC_021768
Unique NameXLOC_021768
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001525:2615..11415+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021768 ID=XLOC_021768|Name=XLOC_021768|organism=Clytia hemisphaerica|type=gene|length=8801bp|location=Sequence derived from alignment at sc0001525:2615..11415+ (Clytia hemisphaerica)
atctataagaatcactatttataagcatagatcaatgttcttagccaaat tattatttcattaatattttttctaaacaaagaaaatgtcaccttagagc gcaatggtttgagttttctaaaaacacttattattttttggctgaaaccg aatctttatctataagaatcactatttataagcatagatcgaTGTTCTTa accaaattattatttttattattattattatttctaaaaggagaaaatgt cacggtagagtgcgatggtttgagttttctgtaaacattatttattaagc tgtgcatttttcNGTCACGGTAGAgtgcgatggtttgagttttctgtaaa ccttatttattaagctgtgcatttttctgatagtggattgtttttataaa gaaaagcgtttaatacctttttttatttctttttcaaaagtatttttcaa ttgtgttgatagtttctctcaatagatatgctttcattttctttattttt ttgtattttgaccagttatgtcttatgtatttcattgtttcaatgttctt tgattagtttgataaccaggtaggtccataaaagtatcacttgttatttt atagaatTTCATCTCGCGATCATCAAATTTATGGATGAAAATCCAGACAG ATAATTCAACTGAGGTAAAAAATGTggataaagaaaaaaacctTATTTGT TATTATTAAACACAGGAAAATTACCGTAAATTTTTACTATGTAATCTTTT AATGATCCAcgaaggaaaatattttcattttttcttgtcGAGTCTTTTAA CCTTTTGCCGACCAGACGCTGATCACAACACTCAACCATAGACAAagatt tgttaatttcattttgTAGGTTATGAACGGTTCCTTACCCTTGCTGGAAT ATTTGGAAACTGTTTTCACCAATGTTGCCAAGGAAACAAAAGATAACAAA CGATTCACTTCAGATGGTATAAGTAAGTCTCGTATTTTttaagtacactt ttttttcaaatgaagaAACTATACCTGCTAGCGCTTTTACTATCGAGGAG CAAAGTCTTAATGAAAACTTTCACTGCAGATGTATCAAACTCATTGATAG CCCCGCGAGTatgggcactcaaggtaaacgacctaccgcACGTGCGGCTC TTAAGGgcgaaaaattgatttaagtaTTTGAACGTAAAAGCTATGTTTTA GGTTATTTAAGACTTTTAACAAAGatttgcctttataaattgctttctaa tcaaaccccttaagagtaactaagaatttaattgcaaaaatgacgttatg aactttaataatatagacgttaataatatgttgcatcacttTCTTCTATA AAAAGtactaagttttaatgggtaattaacctttttgtttcgaagttttt tcaaactgtccgcaaagaattgaactgttttaaatgtttcggaaaaactt tctaaattaatgcatcaaaagttatggctgtttttctatggaaaattggg atggaaaattggtcgaaaagcactattttcaagattttgaagcaaataaa cttttagaaaaattttccgtaAAAATAgttttagttcgataaaagataca ccatctaccgcaaaaatattttcaaaattttttttcttcgccgaaaataa gctcttcaaagttgaaatactcttctttgcgaaagtcttcattttcttct tcatcaattttttcaatgcgattcttaaattttcagactcacggataatt ggcctaacagaaaatgtataacatgccacagttttgtgtgctacatcaag tagaactttatattttgtaagtggcaaatattaaaaattcactatggtca gagcccttaagggtcCTTTTTTCCAAGTtaccaaagtgcactgtaagggt cgaaatgagcaaagatgaaaaaatcCACTCTAGAatgtaaaatttggaaa cacTGACCATGATTTGCCTTAGTTAAAATGgtcaaagtttttcaagaaaa agcaCCGAAAGGGTCGATGTTTTGCCCAAATTTCGCTGAGCTTTCTCTGC GcttaagggtccgatttcaaaggcctagtTTTGAGCcgcacgtacggtcg tttttgaatcgaatgCCCTCCTGTCAGATGATAGTCACTGcaaattttat tattaaatGGTATTAAATGGTATCTCTGTAATTGCGTTCAGTGGTTGAAG TATCAACGATCAAGCGAGGAGAATTTAAAGAATATTCATTCCATGGCATG TCGAAGACGGATAAAAAGGAATGGAAAGAGAGAGAAGGATTATACTTACC ATCAAACTTCTTCCAACAATCCAAAGATGAAGAATTTTCTATTATGGCAA TGGAGTATCAACCACTACCTGTCATGAATGCTGCTAGGTTTGCCATCTTT GTTGTGTTCAATCTCCTATGGTTACCAGTTTCCAGTCCCATCTCTTGTTC TTGCGGTCTGTAGTCTTTGGTCCCTAAAACCCTTAGAGATTCTTTACAAT GTGTCTTCGCCTTGACTCTTCTAAgcttttttttctcgatattttTTTAG TATGGATGATTTCCAGGTTTCTGATAAAGTATATGCAATCAACGTGGATC CGCCATTGAGGGCGCCATTTCAAACGCCATTCGAATATGTCATCAACACA AAAGCAGTAAGTGCGCACTCTAGAAAGTATTTTCTCTATTCGTACAAGAG CcttgaaatatagaaaaaactaaaaatgaaccTATCTTGTAAGATTCAAG TAAttcaatcgtttttttttttgcagcaAAAACTGTATGATGCAAAATGT GTCTATTGGGGAGAAAAGTAAGTACCGCTACTCTTTGAACACGCTACTCC TTTTGTCTTTCTGAGCTCTATTCTAGGAGGAAGGGGTCAGATATTTTGAC GCTTTTTCATCTCTGTTTAGCAACGAGTCTGATTCACGGACCTATCTACT TCTTTAAAAACTTCTGATTAGAAGATACCTTTTTAAATTCTCAACTCTCT TCGTCAAGTTAAACTTTAATTCAGCTCCTTTGGCTCGATTCTCTTCATCA ACTATAAATCAGTCCCTTCGTTTTCTCATTAATGttaaaaaatcgataaa atctTGATTTCAGTTCTTGGCGTACAGATGGATGCTTGACGTATCTCACC AACACTTCGATGGTTATTTGTAAATGTAATCATATGACTCCCTTCTCTGT TCTCATGCAAGTCGAAAAATACGAGGTTTGTTacatttcactttcacttt cgtaaCCTACAGCCCAATTTTTTATCGAAATCATAACGAATAATAGCTCA CTTCGAAAGGTGACGTAATAACAGAACTCATAAAATGGGTGCATATTCTG CATGTTTCTACTTGAAAGAAGCCTGACCAATGAGattgtagtctgaatcg cagacctccacaggtatacttcctataagaaacttttttcgctagaggat gagcagaagtcTAATGAGATTCgcaaatcttcatttttactAAATCTAAT GAAGAATAATGCTTTCATCCGCTGTTCAAAATTTCCTCTGTAAATACTGC TAGACTCATTCCAATGACTGAGAAAGCCTATCAACTTCCTCTTCACTTTA GATTCCAGCAGATCACCGTTTCGCGTTGAGTTTGATCACTTATGTTGGTT GTGGGATGTCAGTAGCTGCTTGTCTCATTCTCATTCTCTCCTTCATGATG TGTGGGTAAGCAAAGAAGACCAAACACGTTTATATCTGTCTCCAGAACTT TTACTGTTAcagtaaaaaagtcaaaaaattttgttttggtcATTCAATCC ACTCAATGGGAATGGAAtaacttatttttttcatttgactgCAATTTTTT AACTGCCTGGATATCAAGGCAACTTACTTTTTACTGTAAATTCAACCAAA ACGTCATAGTGAATTTTTACGACTTTTTTGTGTCTAATCTAACAATTATG TATAAATTTATATCTTCAAACTAGATAAAAACAAGCTATGCTATACTCGA CAAAATCTCTTCCACAACGTAGCAATACCCATAAAAAGGCTTGAACAATG CCAAGAGTCAAAATTTAAACATAGTgaaccatttttctttttgcaggCAA TTGGTCAAAGTGGATCGCAACCTAATTCACATAAATTTGGCAACAGCCAT TGCACTTTCTAATGCTCTCTTCATTGCTGCTGATTCAGTCTATAAATACA AGGTACAGTCATAAAATCATTTAGTGGGACACTTAGTGTACAAAGGTTct ccgtctcagacggatttctgTCTCAGCGAGGTTCAAAAAGAGGCTTTTCC ATCTCCAAATTGGACAAAATTCTGCAAGATTTGAAGACCTTGTCGtttct gtttgaaaaaaaaatgcctTGGACACACTGGGCACTAAAAAATCGATTAA ATATCATCCCGATGAAAGAAGTACTATAAAAGTTCATACCCATTGAGAAC TACACTTTACCTTGTTACCCACTGGAAATACCACTAAAACTTTAAGAATC CCCAcctattgaaattttttttatccccAGCGTCCCATCGCTGTTTAGCT CATCACTTAATTCCTAATGGCTAAATTAATTGTTATCGGATCACTGATAT AGTCAGTAAAGATGATTATTTACACTTGAGGTACTTTAAAGACTGACTGA CAGTACAGTGCTACGTAATAAAACTTTAAACTGCtttcaaatttatattt ctAGNCTTTAAAAACTTCTGATTAGAAGATACCTTTTTAAATTCTCAACT CTCTTCGTCAAGTTAAACTTTAATTCAGCTCCTTTGGCTCCATTCTCTTC ATCAACTATAAATCAGTCCCTTCGTTTTCTCATTAATGttaaaaaatcga taaaatctTGATTTCAGTTCTTGGCGTACAGATGGATGCTTGACGTATCT CACCAACACTTCGATGGTTATTTGTAAATGTAATCATATGACTCCCTTCT CTGTTCTCATGCAAGTCGAAAAATACGAGGTTTGTTacatttcactttca ctttcgtaaCCTACAGCCCAATTTTTTATCGAAATCATAACGAATAATAG CTCACTTCGAAAGGTGACGTAATAACAGAACTCATAAAATGGGTTCATAT TCTGCATGTTTCTACTTGAAAGAAGCCTGACCAATGAGattgtagtctga atcgcagacctccacaggtatacttcctataagaaacttttttcgctaga ggatgagcagaagtcTAATGAGATTCgcaaatcttcatttttactAAATC TAATGAAGAATAATGCTTTCATCCGCTGTTCAAAATTTCCTCTGTAAATA CTGCTAGACTCATTCCAATGACTGAGAAAGCCTATCAACTTCCTCTTCAC TTTAGATTCCAGCAGATCACCGTTTCGCGTTGAGTTTGATCACTTATGTT GGTTGTGGGATGTCAGTAGCTGCTTGTCTCATTCTCATTCTCTCCTTCAT GATGTGTGGGTAAGCAAAGAAGACCAAACACGTTTATATCTGTCTCCAGA ACTTTTACTGTTAcagtaaaaaagtcaaaaaattttgttttggtcATATA ATCCACTCAATGGGAATGGAAtaacttatttttttcatttgactgTAATT TTTTAACTGCCTGGATATCAACGCAACTTACTTTTTACTGTAAATTCAAC CAAAACGTCATAGTGAATTTTTACGACTTTATTGTGTCTAATCTAACAAT TATGTATAAATTTATATCTTCAAACTAGATAAAAACAAGCTATGCTATAC TCGACAAAATCTCTTCCACAACGTAGCAATACCCATAAAAAGGCTTGAGA ACAATGCCAAGAGTCAAAATTTAAACATAGTgaaccatttttctttttgc aggCAATTGGTCAAAGTGGATCGCAACCTAATTCACATCAATTTGGCAAT GGCCATTGCACTTTCTAATGCTCTCTTCATCGCTGCTGATTCAGTCTATA AATACAAGGTACAGTCATAAAATCATTTAGTGGGACACAGTGTACAAAGG TTCTctgtctcagacggatttctgTCTCAGCGAGGTTCAAAAAGAGGCTT TCCCATCTCCAAATTGAACAAAATTCTGCAAGATTTGAAGACCTTTTCGt ttctgtttgaaaaaaaaatgcctTGGACACACTGGGCACTAAAAAATCGA TTAAATATCATCCCGATGAAAGAAGTACTATAAAAGTTCATACCCATTGA GAACTACACTTTACCTTGTTACCCACTGGAAATACCACTAAAACTTTAAG AATCCCCAcctattgaaattttttttatccccAGCGTCCCATCGCTGTTT AGCTCATCACTTAATTCCTAATGGCTAAATTAATTGTTATCGGATCACTG ATATAGTCAGTAAAGATGATTATTTACACTTGAGGTACTTTAAAGACTGA CTGACAGTACAGTGCTACGTAATAAAACTTTAAACTGCtttcaaatttat atttctAGTATGTTTGTCTTGGTGTTTCAATCGCGATGTTGTACACTTTC CTCTCCTCCTTTTTCTGGATGCTGGTAGAAGGTCTTCACGTTTATTTGAT GGTTGTCAAAGTGTTCAAAGGctcaagaaaaatgaaagtctACATGCTTA TCGGATGGAGTAAGTTGACTTTGAAATATTGATCCCTGTGTTAAAGATTT CTAGAGTTTACTGGAAAATATCAACCCTCAAATGTTCCGaaaatctgcca aatttcaaTGCCTTATATTTCTCTAGATAATCAATAATTCTTTAATCTAA AATCAACTTTCTGATGGTAGTTGGAACTGCTTGGAAAACAACTTGCACTA TGTTTCAACTCCTATCTATTTCCATTCATTTAGTGCTACCAGCTGTTATC GTGACTTTAGCTGGCGTCAAATACCACGAACATTTCACTCGTCCAAACTT TTGTTGGATTTCTACCGAACATTTCCTTATATGGATATTCGTCGGACCTG CATTATTCGTCCTGACCATCAACACGATTATACTCATCGCAACATTAAGT GCGTCTCACAAAATGTGTATCAACGAAATGGAGTTCAACAAACTGCGTCG AGTTGCTAGGCTAACTTTACTCTTAATGCCCGTGTTCGGATTATCATGGG TGTTTGGCGTCTTAGCTGTCAATAAAGAACTTTTGATCTTCCAATACATC TTTACTGGTTTGAACTCATTCCAGGGTGTATTTTTATTCGTTTGTTATTG TCTCATGAATAATGACGTGCGGCGTGAGTACGAACGTATACGCCGTAAAT CAGCGTATTCATCAAAATCAAACGGTCTTGCAGACAGTGCGTTTTCAACA TATATTCATTACCAAAACAATAAACCAACACGAACAAGTAATCGTTCTTC CTTACTTTCTTCTGAAGATATGCCGACTACAGTGCTGCTAACGCGCTATG AACATCCCGCCATCAACGAAGAAGACTTCAACGGAAGTTACGCAGGCTCT GTATCAAATACTTTAACTAAACGAAATAAAAAACGCTACTCCATCGAACT TGTTAAACTACCAAACTCAGCACTTGCAGGCGAAGACAGCACTTACCCAG CTATTAATATGACGGATGGAGTACATCTGTTAGCTGTAGATGATAAAGCC AGCGAAATCTATCGATCAAGTACATTTTCTGATCGAAGCTCGCGGCCCGA GCGATCGACGTCGGCGGATGATTTACTCGAAGGGAATGCTTACAAAACTT TCCAGAACAAAGAAGATGGAACTTGTTTATTAGCTTATCAAGTTTAAAAT TAGGTtagactgaaaaaaaaaacgctcAGGTTGACGCGTTGATCTTGGTG GCGTCAGATATTTTTTCCTGAAGGAAATCTAAAGAAGCATCTTTCAGGGC ACCTTCTATCTGACCTATCGTATACAACAGTTACTAAGTTTCTGCAAatt attggaaatttttaaagagtttttaaACCTCTTATTAAGGCCCTTATTAG GCTGTTAGTTTTCTAGATAAAGTAAAATGTTCTTGTTATTtatgttaaaa tttttaaatcaaaattcttATGTTTTAGTAGGATATACACGTGTTTTATT TGTTGATTATACATACAGTAGTATACTATTtacagacttttttttacttt gtacaTTTTCTCTGGATAAATAGTAGATTTAATACACTTAAAAAGATCCC TAGACCATCAAAATATGTTCCTTTTCATCGAGTGTCCTAAGAAAGCAATG ATTTTTGTAATCTATCAAATCGCCACTAACTAAATTCACCAAGAGCTTTT GCTGATATCGTCATACTCTTCTTTATCGAATCTTAGTTTTATTGTACCTC TGTCTAGAGAAGCTTCTCAATCCAACTAAACCCTGGTGATACTTTGTCCA ATTCATCATTGGATGTCATTTGGAACCAAATATCACTTTTCTAGCATAAC AGAAAACATTTTCCACGCATGAAAAAATATCTTGCTATTTTAACCCAAAA AATCTCCGTCCCACAAATCTTCAGGTTTGCCTCCTTCAGGAACAGCCCAT GGGTTCTGACTGTATCGAAAACGTGTTGTAATTGAGCTAATATCTTTCAT ATCTTGTTGGTCAAGTTTCAAGCGAAGacatttcatattttctttgATAC GTCGTTCATTGGTCGATTTCGAAATGACACAATTTCCACGCTGCAATCCC CATGCTAGTAAAACCTATGATTGTTAAGAAAGGAAATTCTATTGTGATAT AATTCAGAAAAGCCAAATCCAAAAGTCCCAGGCTTTGCTCTAAATAGCTT GATATTTCTCATTTCCAAAAATCGGTAGAAAAAGATCTCAGATATCTAGA A
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036843TCONS_00036843Clytia hemisphaericatranscript
TCONS_00036844TCONS_00036844Clytia hemisphaericatranscript
TCONS_00036845TCONS_00036845Clytia hemisphaericatranscript
TCONS_00036846TCONS_00036846Clytia hemisphaericatranscript
TCONS_00036847TCONS_00036847Clytia hemisphaericatranscript
TCONS_00036848TCONS_00036848Clytia hemisphaericatranscript
TCONS_00036849TCONS_00036849Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036848-proteinTCONS_00036848-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001525supercontigsc0001525:2615..11415 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.5 0.89 1.97 1.51 21.97 14.78 5.79 7.32 4.39 5.09 2.8 2.96 5.42 5.07 6.11 7.3 4.92 5.18 6.54 7.15 3.78 4.31 2.09 2.47 4.64 4.83 9.42 5.9 2.55 2.61