TCONS_00036848-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00036848-protein
Unique Name	TCONS_00036848-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	620

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00036848-protein ID=TCONS_00036848-protein|Name=TCONS_00036848-protein|organism=Clytia hemisphaerica|type=polypeptide|length=620bp
MKIQTDNSTEVMNGSLPLLEYLETVFTNVAKETKDNKRFTSDGIMVEVST
IKRGEFKEYSFHGMSKTDKKEWKEREGLYLPSNFFQQSKDEEFSIMAMEY
QPLPVMNAASMDDFQVSDKVYAINVDPPLRAPFQTPFEYVINTKAQKLYD
AKCVYWGENSWRTDGCLTYLTNTSMVICKCNHMTPFSVLMQVEKYEIPAD
HRFALSLITYVGCGMSVAACLILILSFMMCGQLVKVDRNLIHINLAMAIA
LSNALFIAADSVYKYKYVCLGVSIAMLYTFLSSFFWMLVEGLHVYLMVVK
VFKGSRKMKVYMLIGWMLPAVIVTLAGVKYHEHFTRPNFCWISTEHFLIW
IFVGPALFVLTINTIILIATLSASHKMCINEMEFNKLRRVARLTLLLMPV
FGLSWVFGVLAVNKELLIFQYIFTGLNSFQGVFLFVCYCLMNNDVRREYE
RIRRKSAYSSKSNGLADSAFSTYIHYQNNKPTRTSNRSSLLSSEDMPTTV
LLTRYEHPAINEEDFNGSYAGSVSNTLTKRNKKRYSIELVKLPNSALAGE
DSTYPAINMTDGVHLLAVDDKASEIYRSSTFSDRSSRPERSTSADDLLEG
NAYKTFQNKEDGTCLLAYQV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_021768	XLOC_021768	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00036848	TCONS_00036848	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000832	GPCR_2_secretin-like
IPR000203	GPS
IPR017981	GPCR_2-like

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity
GO:0004888	transmembrane signaling receptor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway
GO:0007166	cell surface receptor signaling pathway

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007166	cell surface receptor signaling pathway
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity
molecular_function	GO:0004888	transmembrane signaling receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000832	GPCR, family 2, secretin-like	PRINTS	PR00249	GPCRSECRETIN	coord: 390..410 score: 32.61 coord: 308..333 score: 25.55 coord: 271..294 score: 32.98 coord: 350..375 score: 26.73 coord: 207..231 score: 22.1 coord: 240..264 score: 24.68 coord: 420..441 score: 37.21
IPR000832	GPCR, family 2, secretin-like	PFAM	PF00002	7tm_2	coord: 204..433 e-value: 4.4E-48 score: 163.6
IPR000203	GPS motif	SMART	SM00303	GPS_3	coord: 149..195 e-value: 1.7E-10 score: 50.9
IPR000203	GPS motif	PFAM	PF01825	GPS	coord: 152..189 e-value: 2.3E-11 score: 44.1
IPR000203	GPS motif	PROSITE	PS50221	GPS	coord: 150..195 score: 12.837
None	No IPR available	GENE3D	1.20.1070.10		coord: 190..473 e-value: 3.0E-37 score: 127.7
None	No IPR available	SUPERFAMILY	81321	Family A G protein-coupled receptor-like	coord: 198..461
IPR017981	GPCR, family 2-like	PROSITE	PS50261	G_PROTEIN_RECEP_F2_4	coord: 205..442 score: 33.86

Blast

[Close]

BLAST of TCONS_00036848-protein vs. Swiss-Prot (Human)
Match: AGRD1 (Adhesion G-protein coupled receptor D1 OS=Homo sapiens GN=ADGRD1 PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 2.971e-59
Identity = 119/346 (34.39%), Postives = 190/346 (54.91%), Query Frame = 0

Query:  157 GENSWRTDGCLTYLTNTSMVICKCNHMTPFSVLMQVEKYEIPADHRFALSLITYVGCGMSVAACLILILSFMMCGQL--VKVDRNLIHINLAMAIALSNALFIAADSVYKYKYVCLGVSIAMLYTFLSSFFWMLVEGLHVYLMVVKVFKGS-RKMKVYMLIGWMLPAVIVTLAGVKYHEHFTRPNFCWISTEHFLIWIFVGPALFVLTINTIILIATLSASHKMCINEMEFN----KLRRVARLTLLLMPVFGLSWVFGVLAVNKELLIFQYIFTGLNSFQGVFLFVCYCLMNNDVRREYERIRRKSAYSSKSNGLADSAFSTYIHYQNNKPTRTSNRSSLLSSED 495
            GE  W   GC     N +  +C+C H+T F++LMQV   E+   H+ ALS I+YVGC +SV   +  +++F +   +  ++  R  IH NL+ A+ ++  L + +  +      C  +++ + Y FLS+F WMLVEGLH+Y MV+KVF     K + Y  +GW  P +I  ++     + +   N CW+S     IW FV PALFV+ +N  ILIA      ++  +  + +      +  A+   +L+P+ G SWVFGVLAVN   ++FQY+F  LNS QG+F+F+ +CL+N++VR  ++   +  + +S S   A ++ +   H      TR    S+ LS  D
Sbjct:  518 GEGVWSNHGCALTRGNLTYSVCRCTHLTNFAILMQVVPLELARGHQVALSSISYVGCSLSVLCLVATLVTFAVLSSVSTIRNQRYHIHANLSFAVLVAQVLLLISFRLEPGTTPCQVMAVLLHYFFLSAFAWMLVEGLHLYSMVIKVFGSEDSKHRYYYGMGWGFPLLICIISLSFAMDSYGTSNNCWLSLASGAIWAFVAPALFVIVVNIGILIAVTRVISQISADNYKIHGDPSAFKLTAKAVAVLLPILGTSWVFGVLAVNGCAVVFQYMFATLNSLQGLFIFLFHCLLNSEVRAAFKHKTKVWSLTSSS---ARTSNAKPFHSDLMNGTRPGMASTKLSPWD 860

The following BLAST results are available for this feature:

BLAST of TCONS_00036848-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00036848-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AGRD1	2.971e-59	34.39	Adhesion G-protein coupled receptor D1 OS=Homo sap...	[more]

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TCONS_00036848-protein (polypeptide) - C. hemisphaerica