XLOC_021752 (gene) - C. hemisphaerica

Overview
NameXLOC_021752
Unique NameXLOC_021752
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001520:39424..46618-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021752 ID=XLOC_021752|Name=XLOC_021752|organism=Clytia hemisphaerica|type=gene|length=7195bp|location=Sequence derived from alignment at sc0001520:39424..46618- (Clytia hemisphaerica)
TGTAAATCGAGTTTCAATGCAAAGCAAAGTCAATAATAAATTTGCTTAAT TTTGAAATGTAAATGCAGAGGTATTTGAGTGAGAATGTTTATAAATTTCT ATCATCACTCTGGGAAAGTAGCTAAGAAAACCCAGGACTCCAAGGATTAA AAGTTAATTCTCTTTATAGGGCACGTGAAAGCAGAACTAAAGAGAAGAGC AAGGCTAAAGGCAAGCCAGAGAAATCTAGAAGAAAAAGGTCGCCAAGTCC CAAGCGAAAATCAAAATCCACAAAGGAAAGAGGAAGAGATAAAAGAAAGA GAAGACCTTCTACATCGAGCAGGTAAATAATAAGAAGNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGACT TCTCTCGGGTTCTAGAAATTTTTTACAAACGAAATCCTTTGAATTGGAAA AAGGGAAGATTAACTTAAATTTAGACGGGTCATTTATCAAATTTGGTTCA GTGCATCAAAAGTTATATTGAAATGAATAAAAATTGACTTTCAAAAAGTG CTTAAAAACGTCTAAATTGGACCTATCAAATTAATAAAAAGTAAAGATAC ATTCGAAACCTTTTAAAGTAATTAAAACAATTATTGATTGTTGAAATTAC TTTTTGATGGAGAAAAACGGTGCTAAACTGTAAATTTTCTAAGAAAACTT TCTTAAAATTTCAAAAATTTGAATAAAACTCGTGAAGAATCAACATAACT GGTTTTTCTAACAAAATCAGTGCTTTTCCAGGTCTGCAGCCAAAAATCGA GGTAAATTATGGTAAAAAAAAAAAATATAAAACAGAAGAATAGATTAGTT TGCCTCTTTTGTGAATATTTTCTAGGTTTTATGCTTTAAACTCCAACAAA ACAATCATTATAATGCAAAAGATCATTGTAGCCTCTTATTTTTTTCTAAA AATATAATAGGTCCAATTTGGACGTTTTTGAGCACATTTTGAAAGTAAAC CAACTGAACCAAGTTTGATAAATGACCCATCAAAATTTAAGTTAATCTTC CTTTTTTCCAATGCAAATAATTTCGTTTTTCAAAAATTTATAGAATTCTA GAAAAGTCACTTCAAAGACTGAAACTTTTTTGTGGCGTACCTAAAATTCA GGGGGTACCTATTTTCTTAGTGGGCACTTAAACCCCTGGGCCATGCCATG GAAAGTTTGTTCTTCTAAAAGTAAATCTCATATCTAAAAATGATCAGTCA AGCTTAACAGATTTTGCAAAGAGGCTGAGTTGAATCAGCATGACTGAATA TTCTTTCCCTTTTAAAAAAACTTGTCATTTTCGAACTTCTCTTTCAATTT TTATTTTAATTTTCCCTTTAGCTCTTTTGTTATGAAAAATGTACTGAACT TATTGGGAATCTGGAGACTTTATACAATAACATTTTATAGATGTTGATGT ACACAATATTGTTCAATTTAAAATCTTTTTTGAAGCTCTGTGTAGCTTGT ACAAGTTTCTCAATTGTTTCATATTGATATTACTCTTTATAACAAGCCAC CTGACCATTGCATTGGCATTGAAAAGTGTTGGCTGTTTTGGAAAATTTTT CCTCGATCTTAGACCTTTTTCCTGTAACACATTATTTTTTTACTGCCTTA CTATACTTTATTATAAATCAATAAAGACTCGTTTGAGTTTTTGTCTCGTT ATTATTTTTCAGTGGTTCTTCCTCAAGTTCAAGATCTGGTTCAAGTTCTT CAAGTGATTCTTCAAGCGGATCAAGCAGAAGTTCATCTTACTCATCAAGT TCAGGGAGCTCATCAAGTTCCAGTTCGTCTAGTGATAGTGGTAGAGGTAT GACGCTTTCTTATATTTAACTATTCTAAATTATCAGATTTTTCTCGTTTT GTATTTTCAGGTTTTACCAATAAATGTTCTTATTCTAGCATTTTGTTAGA ATAACGGTATAATATACAGTTTCAGATGTTCCCTCTAGAAATTCCCAAAT CGCAATCGAGAAGTAAATATATGTCTTTGGAGGTGGTAAATTAACCCATG ACATGTGTCCATTTGTTTGTTTGTTCATCATTACTAGTTTTCTCGGGATT GGCTCATTAGTCTTTTTATGATTTTTTGCACAATGCAAAATGACAATACC CAAAGTGTGATTGAGCCTGACTTTCGAAAAAATATTTTTCGGGCAAATTT GCGTCAGAAAGTGCCTAAAAAAGGGTTAAGACTGAGTGAATTCACGTGAA ATTGCTGCATTAGTTTTTATCTGATGTTTTTTACATAAAAATTGGAGGGA AAGGCTGTCTAAAAAGTGCCTGGAGTCGTTTTCGTAGGAACTTAAAAAAA ATAGATCTGATCTATTTTGTTGCAGCCTCCTGCAATTTTTTTGCAATGTT TTTTTGCGTTTTTATTGCGTTGCAGAAAAGATTGCAGAGAATTTGACCTG GCTATGCTCATTTTCTTTTCGAGCGCTTGCAACATAATCTAGATTGCTCA GTGTAGCCTTAGCTTTACATTTGAAATGCTCTTTTCTATAAAAGGAATTT GTTTTGTTTTGAACTGTTTTGAAAGGAATTCGAATGTCATTAATAAATAC GATCATTAAATAACAGGGTCAGGCAAGTCTGGGCAGAAATTGAAATTACT AAATGTAGATGGGCCTTAAATTTCAAAACAAAGGCTGAATAAAGTCTAAA CCTGGCTCTATCCGATCTGTCAATCAAAACAAACTTATCGATAATAAAAA CATTGCTTGCGAAAACGAAAGCGACACACATAAAACAGACAGAAAACAAA CAGACATACAGACTACGGCTATTAATATATAANTGTCCATTTGTTTGTTT GTTCATCATTACTAGTTTTCTCGGGATTGGCTCATTAGTCTTTTTATGAT TTTTTGCACAATGCAAAATGACAATTCCCAAGTGTGATTGAGCCTGACTT TGCGAATTTGCGTCAGAAAGTGCCTAAAAAAGGGTTAAGACTTAGTGAAT TCACGTGAAATTGCTGCATTAGTTTTTATCTGATGTTTTTTGCATAAAAA TTGGAGGGAAAGGCTGTCTAAAAAGTGCCTGGAGCTGCCTGGAGTCGTTT TCGTAGGAACTTAAAAAAAATAGATCTCATCTATTTTGTTGCAGCCTCCT GCAATTTTTTTGCAATGTTTTTTTGCGTTTTTATTGCGTTGCAGAAAAGA TTGCAGAGAATTTGACCTGGCTATGCTCATTTTCTTTTCGAGCGCTTGCA ACATAATCTAGATTGCTCAGTGTAGCCTTAGCTTTACATTTGAAATGCTC TTTTCTATAAAAGGAATTTGTTTTGTTTTGAACTGTTTTGAAAGGAATTC GAATGTCATTAATAAATACGATCATTAAATAACAGGGTCAGGCAAGTCTG GGCAGAAATTGAAATTACTAAATGTAGATGGGCCTTAAATTTCAAAACAA AGGCTGAATAAAGTCTAAACCTGGCTCTATCCGATCTGTCAATCAAAACA AACTTATCGAGAATAAAAACATTGCTTGCGAAAACGAAAGCGACACACAT AAAACAGACAGAAAACAAACAGACATACAGACTACGGCTATTAATATATA GATGATTGTTTTGTGTTTTAGACAACCGTAAACGTGGCAAGAAGGTGGTG AAGAAACCAGCCAAAGGAGCCGGAGGACGTCGAGCATCTGAGAAGGAGAA GGAAGTTAAACCGAAGCAGGAGAAAGAAAATACAAAACCTTCTAAGAAAC AACAAGATGATGAACCGGAAGACACCAAAAAGAAACAGGTATGTCGTATT CCATGCAGGGGAAGCTACTATCATTGGCAAAGCTCTGGCTCTTCTGTCTG TAGACAGTAATTCATCTAGCTGAGAAATCTAGTTTTATATAATCTGATTA TAAAGCAGGTTGCATAAAGAGCAACTTCTTGGAGGTTTTATCATTTCTTT GTTCTTCTCTCCCAGGACGAAGCGAAAGCGAAAGAAGACAATTTGAAATT GTTGAAACAACGTCAAGAAGCAGTAAGATGTGAATTATTTTTGTTTGAAT TATCGTTCGTATCGACTACCGTATTCTAGATTCTATAGAAACAATATAAA TATTTGTTTAAAAGAACTCATCTCCTCAAGAAACTTGAAGTGCTAAAATG GTACGACCAACGGAAACTCGTTTCTTTACTAATATATCAAGCCCTTGCAA TGATTTTTCTAACCTAACCGTTCGCCCATCCAGCTTTTCTCGAGATTAGT TACCCATTAGTTTCTTCTAATTTTGACACAGAATGCCAAATAGCAAATGT GTAAAATGTGGTAGAGCCTGATCGTCAACATGACGGAAAACCGGTTTTGA CATTTCTCAAGATTTTATCGTTCCAATTTTTTGCACAAAGATGTGATCGA GTCCGATTGAAACTTATTAAAAACTTGAGTTAAATTGTCTAACCGATAAT AACTGGTAAACCTGATTCCTCTTTCTTTACCTCCCAGTTGCGAAATCGTA AATCTGAATCAGAGGATGAAAAAGAGAACCCTAACGAGTCGCTCAACAAA AGTATGGAAATTGAAGAAAAAACAAAACTCAAGCAATCTCTCGAGAAACC TAAAGCAAAATCGCCACCAAGAGAAAACAAACGACCACCCGTCACAAGAC GCGCTTCTTTGTCCGGCAGTAGTCGAAGTCGTTCACCTCAGCAACGACGT CGCAAATCTCCGTCTCCCGTACGCAAACGTCGCGTTTCCAGATCACCTCC ACGAAGAAGCCCCATTCGACGTGCTTCCAGGAGTCCTGTTCGTAGAATTT CTCGCAGCCCAGTTCGTAGAGTATCACGCAGCCCCGTCCGTAGAATATCA CGAAGTCCACTTCGAAGAAGTAGAAGCCCCAAAAGATCGCCCGTTCGTCG AACGATAACAAACCGTCGAAAATTATCATCTTCGCCCGAACGTGCTCGCT CAGCTTCACCTGCCAATACGAAATCAAAACGCCTAGCTCTAAAAAATTTG TCAAGGAACATAAACAAAGATCATATTTTAGAAATTTTTAGTGTTTACGG GCGTATTCGCTCCATAGACTTGCCATTAGATGCGCAATTATATTTACCGC GAGGACACGCTTGGGTCGAATTCGACCGTGCGGAGGATGCAAAGGATGCT TGTTTACACATGAACGGCGGTTGGATTGATGGTCAGGAAATATCAGCGAA AGAGGTTCTAACACTCGAAACTGCAAGTGGTCTCGCAAGTGCACGTAAAC GACAACCGGCANACACTCGAAACTGCAAGTGGTCTCGCAAGTGCACGTAA ACGGCAACCGGCTCCTGTCAACCAATCGCGACCCCGCGGTGGTCCGGCTC CAGGACGCCGCCGTTCTCCACCAGGCCGATTTAACACAAGACGTTATTCG CCTCCCGCACGACGATCGCGAAGTCCCGTTCGACGTCGTTCTCGCTCACG CTCTCCTCCACGCCACAATCGTAGGAATCGTAGAGGTTCAGTTTCAAGTG GTTCGGACTCTTCGCCTCCAAGAAGGAGAGCATCACCACCGAATCGTAGA CGCAGATACAGTAATTCCACATCTGACTCGGATTGAGTTTATCTACTTAA TATTTTCATTCCAGAATTAATGAGACATTCATATTTGGTTCTTTGACATC GAATCTTATGATCCCGCTCTTACTTTTTGAATAGAATGGTTTCTTATCTG TCTTCATCCAAGTCTTCATACAAACTTAAACAATCAGCAATAATTTTGGG ATTTTTCATTTTCATTTTGAGAATGTTTTAATGGAAATATCTTTAGCGTA AGCTGATCTTATTTTTTATGTGATTAATTTTGATTTTGATTTGTACAAAT AAAGAAATTTCCCCCTTAGCAGTAATATAGGGAAGTGTTTTATAAAACAA AGATTCCACCCAAAAGAAACTACAATTTTTATACATCATAAAACTATGCG AAACAAGCCAGGGGGTCAGTACTAAAATCCCAGACATATATATGAGTCCT AAAAGGGTTTCGAGAGTTTTCTGCGTACCACCACCCCGTTTTAGAGAAAG TGATTTTTTAGTGCCCATGTACTGAAATTTTTGGGGGACATTTTGGCACA GAGACCACCCAATTTTGGTCCTCTCTTCTCAGGACATTTTATCTTCTCGA GACCATTTTTCTCAAAAGTGATGATTTTTGCAACATATTAATTTTTGCAA AAATTGATACTTTTAAACAAAATGCAAACACTTTTAACAAAGAATTGCCT TTATAAATTGCTTTTTAATTATATCCCTCAAGAGTAATTAAGAATGTAAT TACAAAATTGACGTTATGAACTTTAAGAAGACGTTAATAATATGTTGTAC CAAGGAATTATTATAGACACTGGAAAAACAACTAGCTGATTTTTGCCAAT TTCTCATGTACAAGCCTTGTCCGCAGTAATGACATTATTGTTCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036825TCONS_00036825Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036825-proteinTCONS_00036825-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001520supercontigsc0001520:39424..46618 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RNPS1RNA-binding protein with serine-rich domain 1 isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
102.93 92.66 212.5 227.77 298.66 241.42 165.94 183.08 89.62 124.81 81.45 64.56 59.8 66.4 69.49 88.43 119.72 91.21 23.49 33.25 50.07 52.41 87.54 76.34 98.82 97.65 37.07 26.6 72.42 77.85