XLOC_021708 (gene) - C. hemisphaerica

Overview
NameXLOC_021708
Unique NameXLOC_021708
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001510:15552..20662+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021708 ID=XLOC_021708|Name=XLOC_021708|organism=Clytia hemisphaerica|type=gene|length=5111bp|location=Sequence derived from alignment at sc0001510:15552..20662+ (Clytia hemisphaerica)
TAAATACAATAAAGACTGTACTTTcagaaatgttttaaaaatatcataaa agtTAAACTTTATGTGAAGCATGTGAAAATGATTAATCTGACTCTAAAAT GTTAGGAAAATTTGTAACATAAGAATATCCACCATCAATATCCAAACATA AACATTGCTCTGAGATTTCGGTAATACTGATTATACTTAATTTATTTTGA AGTTGGACTCGCTTTACCAATGGTTTGCTTTCTCCAGgcttaaaacattt taagaagCTACTTGATGgctgaaatatttgaaaaggcTGAGCATCGAAAT AATTACCAAAAGCAACATAAAAATCGTTTCCATCATCTGTCTTGAAACAA GCGAAGCAATTAGTTGAGAAATAATGACCTGTGGTTTGGGAGACAGATAT GCTATTTCTACGCGTCTCCTTGGTGCGACAGCTTGATCTAATGATGAAGC CACCAAGCTTAATAGATGGAAATGTAAAAGTAGAAGAATAAATTGTCATA AAGCGATCGGTAAACAGGGAACTTTCTTCTTTTGAAACAGCATATGGTAA AAAGGCGTCAAAACCGGTCAGATTTAGATTGATTTTAAAAGTATGTTTAT GATAAGTTCTCTTCAGCTGCTTGATATACTTATCCTCCTTTGTGCCAGGT TCAATACAGGTTTCTTCTAGATATGGAAGATGATTAGATGCTGAAACTGC ACATGCTAGTTGAAATAGAATATTATGTGTGCCATGAATCAGTTTTAAAA TATAACCATTCTTATCCTCAAAACTAAACAAACTGTATACATAAAGAGGG CCAAGTTCCAAGACTGTTTGAGGTAGGTGATTCAAGGAATGAATATTGAT GGTCATGTAGCGACGTGGATATAGCTTGTCAAAAGTggagcaaaacaaaa aaataaatcttctCGCAGTAACAATATCATCTGGGGTAATTTTTGATTTC AGTAATAAATGCACTGCATGGACAAGCAAATAAAAGTGTTCAAAATAGAT GGAGGGTAAAAGGTTTGACATGACGGGAACAAAGTAGTATAATAAAAATG AACGAAACTCTTAGGCTTTCCAGTAGCCAAGATTACTTTTTATTGTTCGG GGTGCACATGATATATAATTTGGTGGTTTCAGTGATACCAAACGGTTTTC AATAGAAGGTAGACTTTGATATACAGAATAAGATTCACTTTTATGAGAGC CATCAAACCATAAAGACATTATTAGTTTGGTAACTCCTAAAAGAACAGCA TGCATATAGTCAATTCCCATTCCACGGATAATATCATGTTCTGGTAAAAG TATTAACGGAGAAGGTCCTTTAACCCCTTTAACATGAACTAAACTGTCAG AGTTGGCTGATTCAATAGCATGCTTTATAGTACCTGCATGTGTTCTATGT GGACCAGTTGGATTCGATTCATCAAAAGGAAAAGCTCTAACATTCCCATT CTTATTTGTCTTCACTGTTTCTCCAGACTGCAGGCATTTTGGACAACCAT AAAACGAATTGAATTGTTGAAAGTTCAGTGCACTAGCTTTGGCAGGCATA TCAAGGGTACCACAAAGCAAAATGGATTTTAGAGTAACTTCATCATTAAT TTTGGTTCCAAAATATGCCAATTCTTTAATTGTCTCAAATTGTGGTGGCA AAAACAGTAACATGTTTGGATGTGTCTCCCCATACCACAGGCCACTGAtt aaaatgttttcctttttcctTCGATCTTGAAAGGGCAACTCATTAATGGT ATAAAACACAGGCCAAATGGAAGATTTAATAGACTTGAACAGCGGTACAC CATCCGTATTCCACATAAACGAAATATTNTAAACAAAAGtgaatgaagac aaaatgtaaacaaaaatattgcaaagaagttttcgaatgaattcacaata gaatgtcttcatttaaaaatagaaacactcgatttcattaaaaaaaaaaa acattctttttttctttcagtaagtctttttgtgttgttgttagtaaatt atattcacttttttgaatatattttttcgaataaagtcacttttggATTT TGTTATGATCCAGCACTACTAAATACTCATCATTATGGatgtttgtgcca atgctagatcagcatttcataaatatacaTTGCGTCGTTCCCTTTAACAA GTTATGTATTCTTATATTTTGTACACATCAAGACTTACCATAGATTGCCC TGAAACTGTCACTCCTTTTATGAATGtgataaaaaattttgttatttaag TACATTATTACAGGTGATCTACTTTAGAAAATGACTTTAAACACATAATT TGTGGAAGTAGAGAGTAACGATTTTGAGTAATATTAAAACCCTTTCTTAT CCAAgacaacaaaaaaatgaaattggagGGATATTTCATGCTAAGTTACT CAATTCTATGTGAAACTTTACCTGaaagttgaattttcaaaaattcatac cCATACCCCCAAAAAATTAATATGGGACCTCTGAGTCCCTACGGATTAGA AATACTGAAAAAAAGGTAGATTTCAAGAATATCCATGTTTTtcgtaaaat aataaaataaatggAACCTAtttcataataaaaaaatagCAACAccacaa aatcaattttaactGATATTTTTAGTACTAATAGCACTATTAGAAAAGTT TCAACagtcaaaaagtgtttttcagtTCAGATTGCTTCATGAAATATAAG GTTGCAGTTTTTGCTAGGATTGCAACAAAGGTAGACCTGGCATGTCGAAC ATTTGCTGAAAGGTCTAGACTCAATGTTCTGTTTGCTGCAGACTTCACAT CTTCCCCTCTTTTCCTCGAAGACTATCCAGTGGCAACCTTTATTCTCCAA TCTAATGCTTTTTGAAACGGAATAGTCTGCTTTCCGCCGCTTTTTGGATG CCGGTAAGGGAGAATTGCCAAGTGGTCGACCAACTTTCGGCGGTTTTGAC AAAGTAACAAGTGACTGAACAACAAGTCTCCGGTAACTCAACATGGGCAT GTTGTTGTTTTCCAGCTTTCTGAAGACAATAAATGCATTTGACAGAGTTC GGTCAagcaatccaaaaaaaatccgatGCCACCATTTTGTCGATTTCCGA CTACGGCCATTGACCGCACACTTGAAATCTGCCTGATCAACACCGCCCAT GTACATATTGTATTCTTTTATTGCCAACGGGCAGTTAAATTCCTTACGGC TACCATCTCTCAATCGACGTAAGATCTTTGTTGAGGAGGTTCCATGGAAA TTAGAAACAACAGTTACTGGCTTTGAGTCCATCCACTTATAATAAGATAT TTCACCCGCAAGCCTGTAATCGAAGTCTCCGCGTTGCAGATTAGTGGGAA TATGCTTGTGGTTCCCCTTTATAGTCCCGCAAGCCCGGACACCAACAGTT TGCAACTGAGACAATAATGAAATTGATGTGAAATAGTTGTCAATATAAAC CTCATGGTCTTTGTGATGAAGGTGGTCGACAAGTTTCAATACTACGCGCT CACCAAGACCAAAAGACTTAAGATTTTCAGGGACAGATTCAAACTTTCCT TGGTATACATCAAATTTATTGATGTACCCATCAGTGTCAGCAATCATCCA CAGTTTGTACCCTCTTTTTATTGGTTTTTTAGGATTATACTGCTTGATAG AGTGTCTCCCTTTGAATAAAATCATACTTTCATCAATACTGAGATAGCGC GATGCATCGTACAACTTCAAAAAGTTCCCATTAAGGCTATCTATAAGAGG GCGTAATTTGTACAGTTTATCAGTATTGTTTTTTGGAATTTGAGCATTGT CATTCACATGTAAGTTCCAGAGAATCTGTCCAAATCTATTGCGACTCATG ACATTTGAAACATACGGCGTAGCCAAATCAGGGTCAGTTTTCCAATAATC CAACCACGACGGAAGCTTATTGTATCCCATGAGTAGATTTATTCCTAAGA AACCATACAGTTCCTGTCGGCTGATAGGTGTTATTGCTTTACCATTTTGT TTCTGGGTAGCATACAAGTTTGTTTGGTAAAGaatgttttcttgaatttc gttgtcaaaaaatttaagaaaatagtCATTGGGGGTGTTACAATCGCCAA AATAAGCAAGCACAGGGCCCTCGTGTGAAGAAAATNTCGACATGACGGGA ACAAAGTAGTATAATAAAAATGAACGAAACTCTGAGGCTTTCCAGTAGCC AAGATTACTTTTTATTGTTCGGGGTGCACGTGATATATAATTTGGTGGTT TCAGTGATACCAAACGGTTTTCAATAGAAGGTAGACTTTGATATACAGAA TAAGATTCACTTTTATGAGAGCCATCAAACCATAAAGACATTATTAGTTT GGTAACTCCTAAAAGAACAGCATGCATATAGTCAATTCCCATTCCACGGA TAATATCATGTTCTGGTAAAAGTATTAACGGAGAAGGTCCTTTAACCCCT TTAACATGAACTAAACTGTCAGAGTTGGCTGATTCAATAGCATGCTTTAT AGTACCTGCATGTGTTCTATGTGGACCAGTTGGATTCGATTCATCAAAAG GAAAAGCTCTAACATTCCCATTCTTATTTGTCTTCACTGTTTCTCCAGAC TGCAGGCATTTTGGACAACCATAAAACGAATTGAATTGTTGAAAGTTCAG TGCACTAGCTTTGGCAGGCATATCAAGGGTACCACAAAGCAAAATGGATT TTAGAGTAACTTCATCATTAATTTTGGTTCCAAAATATGCCAATTCTTTA ATTGTCTCAAATTGTGGTGGCAAAAACAGTAACATGTTTGGATGTGTCTC CCCATACCACAGGCCACTGAttaaaatgttttcctttttcctTCGATCTT GAAAGGGCAACTCATTAATGGTATAAAACACGGGCCAAATGGAAGATTTA ATAGACTTGAACAGCGGTACACCATCCGTATTCCACataaatgaaatatt gaaagGATTGTTCAAAAATGATGAATAAGATTTATACAAAGAAAAGTCAT AAATGTCTGATGGAAATGAAGAGGTACGAGTAAACCTGTGCTTTAATTTC TGAAGCATGCCAGTACgagaaaaaattgatttaatttgacttttgaGGTC GAACTCCATAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036757TCONS_00036757Clytia hemisphaericatranscript
TCONS_00036758TCONS_00036758Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001510supercontigsc0001510:15552..20662 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.99 0.88 0.61 0.29 3.12 1.51 3.36 4.11 2.9 2.85 4.34 3.75 3.91 3.43 2.68 2.98 3.4 4.18 2.47 2.24 3.46 3.22 1.74 1.91 3.34 3.79 2.14 1.26 0.71 0.77