XLOC_021658 (gene) - C. hemisphaerica

Overview
NameXLOC_021658
Unique NameXLOC_021658
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001496:33395..41910-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021658 ID=XLOC_021658|Name=XLOC_021658|organism=Clytia hemisphaerica|type=gene|length=8516bp|location=Sequence derived from alignment at sc0001496:33395..41910- (Clytia hemisphaerica)
TGGACTAAATAATTATTCAACAGGACGTCCTCTTTGAAAAAAGGTCTATT
TTTTTGTTTCCTTGAGTTGAAGACTTCCTGTTTTGGAAGCTTTCTTTTTA
GTTTATAGTTTTCTCACAACCTAACTTCTAACTTATAGACTTTAAAAGAC
CATGTAGTTCTTCCTGGCTCCTTGGGAGTTAAAAGCTCTGATGGAAAATT
AAGTTTTGGCAACTTTTTATCCCTCTTTTAGATGTAATACAATATAATTT
GAATGGAGCCCAAACTGAAGTGGAAACGTGTTGCCTTTTGTTATTGTGGA
TGCATTCCAACCAACCCACACATACACTGTCCATGTCCAGGATGCGAGGA
CAGAGCTGTCAGTATACGAACAGAATTAAGACATAGGAAGCAATATGCTG
AGTTCAGTCTCAGCTCTGAACCATGTGTCTCCGGAGACGAATCACCAAAC
CAATCATGTGAAGATGAATCAAACCAATCAACTCGAGATCAATCAGACCT
ATCAATTCAAGATGAATCAGACCTATCGATTCAAGATCAATCAGACCAAT
CAAGTCAAGATGGAGATCCTCAAGAGCTTGAAAATCCTGTAACTCATAAC
GAGTTTGAACAACAACAGCTAGAAGAAGATGGACATCAACAGGATGAGCA
AAGAATTGATGTAGACAATGCATTTGACAAGTAAGTTTCCAGAAAGTAGG
TAAAATTCTAATGGTTCTTTTCAGTGAAATGTGTATAATCAGTGAAATGT
GTATAAGAGCATACAGTAAAATGGAGGTTAATGCGGCTCTTTGTCCTTAT
GCACCTATAAACCCTTACCTTACCACTTTTGAGGTGACTGGTAATGAAAA
TACAAGAAAAATTCTTCTCAACAACAGTATCAAGTGTAGGAAGGCTCTTG
TGAAAAAAAATGTAAGATACCTTTGCATGAAGCGATGAAGTAACGTTGAT
ATACCTTAAGTGGATAAATTTGGCGGGGATTTAATTTGGCGAATTACCGA
ATCTGGAAATTTTGGCGGGGATTAAATTTGGCAAATTTGGCGAATTTTGC
CAAAATTCGCCAAATTAAATCCTCGCCAAAATTTCCAGATTCGGTAATTC
GCCAAATTAAATCCCCGCCAAATTTAACAAAAAGGGAATTATGTGAAAAA
TCACAACTTTTTAGCATATTTTTGAGTAATTTTCACCCATTTCAANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNATTCCCACTCACGGCAGTTCACTTGGCAAGTGA
ACGTTCCTTTGCCCGGGTCAACCCATGCCATGTGAGGGGAATTGGGTAGT
CAGTTCAAGGTGCTGACGGGAGCTCATTAGTAAGCATCTATAGTTGCGAG
AATAGGCCTCTAAAGCCTCCTGCAACTCAACCAAATAGAAATAGAAATAT
GACCACAGGTAATATCTTTGAATATTTTTTGCATCATGCAATATTAATTG
AAATATGTTTCAGATTGATAACCCTTGGCTTAGCAGATGACTTTCCTCCA
CAAATTTTCGGTTATTTAATTCTGGTCTGTAAATTAAATGGCTACCCCAA
TAAGTAGCCCAATTGGGGCTACCTTACCTTTTAGGAATACCAATGATTCT
TCTTGATTATTTGGTTTAATCTTATTCAGACCATTCATTTCATCTTTTAG
GGAAGAGTTTGTCTTGTCACATTTGATTAGAACCTTGTCCTTGGCCTCTG
AGATGAATGCATCCACAAATCAAACAAACGAATTACTAAGCTATGTTGGT
GAGCTGATAAAACTAGAATCTGTGGACGTGAAAAGGGAATGGCCAACAAG
TTCTGCCAGTGCATCGTCAGTTTTGAAACAACTTGGTCTGCTGTCTGCTC
CCACACACCACAAGATATGTTTCAGCAAAGATCATCCTCAATACTGGTAT
GCATGTGATGACAAAACATCCTGCCCTGATTGTGACAGGCTTCCTGAGAT
CGACCGATATTATTTGTCTTTGGGGGACAAAATGAAAAAGTGGTTTTCTT
CAGTTTCAATGTCATCATTATTACTGGGGCATTGGAAATACCGGGAACAA
TGGCTAGGCAAAAGAGGACCAACTTGGCCAATGAGTGAGATTTAGCATGG
CTCAAAATTCAAAGATCTACAATGGTTTTGGGATCCTGAAGCTACCTGGC
CACTGCCCCATAAGTGTCGAGAATGTCGCAGATATAATGATTTGGTATCT
TTGGCCATTCCAAATGATCAAACACGTTTTGAATTCACTTGCAAACACTG
CAACAATAAAGAGTTTATTGATGTAAATTTTGTTCAAGGTGACCCAAGGA
ATATTGGTCTAATTGGACATTGGGATGGCTGGCAACCTAAATTTGGAAGG
GGAATCTCGTATGGTTCTGGTAAGTCAACATCAATTTGAAAAGCCAATTT
TTTTAGATCTGGAAACTCAATTGAATTATATTATCTAATATCTTTCAGTT
TGTAAAGGCTGATTTTGAAAGGCTGTTTTGTGCTTTTAAGGAATGTCAAC
AGGTGTTATTTTCATTGCCAAGGGTTACTAAGAATAAGCCAATTAATTTT
GCTTTGCTTGGCCAAAAATTTCTTAATTTGATATGCAATACCATGTGCAG
AATTTTAGGGCTAAAGAACTATAATCTTTTTCATGTTTATTTGTCTCCAC
AATTATCCAGTATCAATCTTTCCGTGATCTTTACGATGTCTTTTTTTTCT
AAATTCATTTTTTGCTTATTTTTTTGTTGAGCAAAAGAAAGTAGCTTTTT
TTCATTTTCTGTTCAGGTCACAAATACAACTACAAAATTTTATGCATTCT
GGATTAGGATATAATAAAAATCACAAAGATCGACAAGCCAAAAGACATTG
TTTAAGGTCTACAGTAGCACTTATTTGAGGAAAGAAATTGCATGGATTAA
TTTTGGCCTAAATTAATTTAATTAACTTAAACCTCAAAGGTAATTAACTA
ATTGATATGAATCACAAGAGATTGATTGATTTTCTGTTTCTTTTAGGCTC
AATCGAACTTACCGTTGCCAATATGGAAAAAGAGAAGCGCTGTCTTGACG
AAAATGTTTTTGTTTCCAGTTTTGTACCAGAACACAAGTTGCCAAATAAA
CAGCCTAGTGCACTCGATCCGTTCCTTGATCCTCTTGTTACTGAACTTGA
AGAACTGTTCATTAATGGTAGGTAACTTTGCTAAGATAACAGCGAGGATC
ACTACTTAAATCTCAGATATTATGACATTTTGTGACATAATGATATGTCA
GAAAATCTCCAAAATGTTTTTAACATAACATTTGAGATGTTTTCTAGCTG
TTCTAGTACACTTNGTCAGAAAATCTCCAAAATGTTTTTAACGTAACATT
TGAGATGTTTTCTAGCTGTTCTAGTACACTTATACTAAAATTAGAGATTT
TTATTATTTCATGAATTTTATTGGTTATTTTTTTGTACTTTTTCAAAAAA
TCAAACTTTTCTCCTTTGAAGAAATCTAAAATNACTTATTTTTTGTTGAG
CAAAAGAAAGTAGCATTTTTTCATTTTCTGTTCAGGTCACAGATACAACT
ACAAAATTTTATGCATTCTGGATTAGGATATAATAAAAATCACAAAGATC
GACAAGCCAAAAGACATTGTTTAAGGTCTACAGTAGCACTTATTTGAGGA
AAGAAATTGCATGGATTAATTTTGGCCTAAATTAATTTAATTAACTTAAA
CCTCAAAGGTAATTAACTAATTGATATGAATCACAAGAGATTGATTGATT
TTCTGTTTCTTTTAGGCTCAATCGAACTTACCGTTGCCAATATGGAAAAA
GAGAAGCGCTGTCTTGACGAAAATGTTTTTGTTTCCAGTTTTGTACCAGA
ACACAAGTTGCCAAATAAACAGCCTAGTGCACTCGATCCGTTCCTTGATC
CTCTTGTTACTGAACTTGAAGAACTGTTCATTAATGGTAGGTAACTTTGC
TAAGATAACAGCGAGGATCACTACTTAAATCTCAGATATCATGACATTTT
GTGACATAATGATATGTCAGAAAATCTCCAAAATGTTTTTAACATAACAT
TTGAGATGTTTTCTAGCTGTTCTAGTACACTTATACTAAAATTAGAGATT
TTTATTATTTCATGAATTTTATTGGTTATTTTTTTGTACTTTTTCAAAAA
ATCAAACTTTTCTCCTTTGAAGAAATCTAAAATGTGGTAGAGGCTCTTTT
CAAAAACCTTTTAGTCCTTATATGTCTGAGATCTTAGTACTTGCCCACCT
GATTGTAAGATGTTTTGATATTCAAAAGAGCTGTAAGTTGCTTGCATCAT
TTGCCATTGTGTATCGAGGTGTAATGAAAACTTTTTTTTTTGGAAAAGTA
TTATTACTGCAATATTAGGTAAATAATGAATTTCTTAGTGAAAACATAAA
TTCTTTGAGTATGTTGGAAATTGGTTTGACTACTGACACCCAAAGTTTTC
ATCTGATACATAAAAAGATGGATAGATTTAATATTGAAATCTCATTGAAT
ACAGTTACTCTTATTAAACTTCTCAATTTTCACAGGCATCGAAGTAGATT
ATCCAATTGATGTGCCAGAGTCTCCATTGAAAAAGGGGAAGTGTAGAATT
ANTTTCACAGGCATCGAAGTAGATTATCCAATTGATGTACCAGAGTCTCC
ATTGAAAAAGGGGAAGTGTAGAATTAGATGCATTCTTATCTGTTGGACTG
GAGACTACCCAGCACGATGCCAGATTGGAAAATTTTCTAAGAAGGGTACC
TTTGGTTGTAGAACAGATAAATGCAAAGGTATGTACCAACTTGCTTGTTG
TGGCGATGATTATCACATTTAGCCTTGTGCTAGTTTTCTTATTGACGTTA
CGTGAAGACCAATAGCTTTTTAGTTTACTAACATGGGAAGTTTCAAAATC
TACAATTTGTATGGAATGAGCCTTCCATTTCCAGCCCAAATTTCAAGTCA
CCTTATACTTTATAAATGGCGAACTTTAAGTCTGAGAAACTGGATTTCAA
TGCTTCTATCAAATTGGGAAATTGGAAAAATTGGGTCGCTTGTTAGGTTT
CAGCTATCTTAACCTACACTATGTAAATACACTACGTTTAGCCTCAAATT
CGCTTGTCAGGCCTTGTGACCCCATTACAGGCCTTTTAGAACACCTCCCA
TCCACTCATTTTTGCTATGTCACAATAAATTTTTCAATTTTCAAATTTTC
TTATGCTAACGTCAGCACTTATTAATAACTTCTGAGAAATAAAGACAGTA
TCAAAAATAGTATGTTGTTTTGTTGTTGAGATATGAATAAGTTGCTGGAA
AATGAGATTCTTTCAGATTCTTTGTTGATTAGGCATTTTTTTATAAATTC
TTTGAAACATTCATGGTTAACAGGCTAAAAGCGGAACTAAATTAGTTACT
GATAAAGTGATATCAAGAAATATAGGACTCCTGAAACCTATTTTGCTTTC
ACGGAAACAACTGTACGAGATGATTTTTTTTCCTTATTTTTTGCAGGCGA
GTCAGTATCAGGCAGCACAACCAAATACTACCTCAATAATCGCCATCACT
TTACCAGTCCGTGGAACAAGAGGGAAATGTATGACGAATACGATGTGATG
GAAGAAATCGAATTTTCAGAATCGTATGCCAGAAAGAAACAACGCGCAAA
AGAAACTGGGTATATTGGTATGACTCTATTGGCAAGCCTTTATGATTGAT
GTATATAGTTTTAATCCATTCACCGATATGTNGAATTTTCAGAATCGTAT
GCCAGAAAGAAACAACGCGCAAAAGAAACTGGGTATACTGGTATGACTCT
ATTGGCAAGCCTTTATGATGTATATAGTTTTAATCCATTCACCGATATGG
TTCGTGATGTAATGCACTGTGTTCTTTTGAATTGTTGTAAAAAACTCTTC
ACCAGATATTTCAAAAACCCGGAATTCGATATGGCAAAGTTGCAAGAAAA
TGTAGATAACTTTCCATTCACCTCAGGTAATTAACATATTTTGCTCTTTT
GACATTATTTGAGTTAACCGAGTTTTGATAAAGCCATTACTAAAGCTAAC
TTTCAAATTTAAGTCTTTTTAATTTTTAATTTTTGTTTTTATTGTATTTG
TCAAATTTAGATGACCATTTCTAAGATGTTTTCTAAATTAATAAATTTCG
ATTCTAGGTATGTTGGATGGTCACTGTCCCTAGAAGCTCGCCAAGTACAA
CTCATGGACGGCTGAAGAGTGGCAGAAGTTTACCTTCCCTATGGCTGAAG
TTGTTTTTATCGATCTAGTTTCTGAAGATGAGCTTCACCTTGTCTGGCTG
ACTGCCAGAATGGTCGAACTTCTCTTCCACCGTCGAGATGCTTTAAGTGA
GGAGGAAGTACAGCATCTCGAAAATATATGTTGGCGGCGACTCATACTAC
TGGAAGAGCAAGTTGACCCCAAACAATGTGTGATCACCGCACACAATTCC
ATTCATATTGCAGAGGATATATTGAAGTTTGGGCCCAGTGATAACTTTTG
GTGTTTTCAAAATGAAAGAGCTGTAAAAAGGTAGTTTGATAACTTTATTA
AATTTGATTATCGAGTAAGGTTAAAATATTTTCTCTTCACTTATTTTACT
AACGTTCATAAAGGCGCAAACTTGGGCGAAAAGTGTTTTTAACGTTTATA
GCAACTTAAACTAAAGATGGTTTAACTGTAACTAACTTTAACTGTTCGAG
TTAAAGAGATTCCATTGTATTACGACATCTATAGGTACAAGGATCTTCCA
ACAAATTTCAAGAACATTGAATGCACATTTTCAAAGGCCGAACTCCGAAG
AGAGCTGTTGATGACGCTGAAACCCAAAGGTCAAAAGTTCGCTTTCAAAC
TCATCGATGAAGTAAATATGGTATGAAATGTTTTTGTTATGAGTGACCAC
TTTTCCTTTAAAGCTGTTTAAAGACAAATTTTCGAACATGAAATTATGTG
AAATTTTTTTTTGCAAATTCCCATCACAAAGAATCCATTTACCCAATCGT
TTCTGAGGTTTACAACAACGATAAAAGCATGTCTTATTATAGGAATTTTA
GGAAAACTGTATAAGAAGTGCATTGATATTGTTTCTTTCTATTTAGATCT
CTAGCAGTCTTGATGGAGCAAAGGCAATAGCTTGGAATACAAGGCTAGCT
GGTAGAAGCGTTTCAGATTTGGTTGTATTTATCGGAGCATCGTCCTTGGA
TACCGTACATTTATCTGATGACATGCTTAGGAGACGTGTTGAAGCAGATG
GCCTTGGACCTGGTGATATATATCAATCATTTCGATCGTGCTACTTTGCA
GGTTCCAGGAAACATGTTAAGTCAGGCAGTTGTTTTTTATTTAATGACGG
ATCAATTTGTATGGTTAAAGAACTGATTTTTGTGAAACATTCTACTGGCT
CTTCGAAATATATTCGTTTGGAAAAATTCGAACGAGACAACGATGGATTA
TTGATTCAAGGTTTCCAAATATATTCTCACGATGCAACAGTGTTCATTGG
ATCTCTGCTCGATGTAATACGCGAAGTCATAATGTATCCCTACGACGATG
ACCAATTTATCTGTATAGATGTCAATCGGGGTCATTTCAATTTCGGTTTT
CCAGTTTTGCCTTAAGTTTTTATACGTCTTATGTAAACAAGATGATGCTC
TCGTTTTATTGGCTTAAGGTTTTACGTATAACAAATCAGAATAATTATTT
GAGCATATCAATTTAAAAAATTTCAGAGAATCAGACACATATCTTTCACT
AAGACTAAGCCTTAAGGCTAAATTGATTGTTGGTCTTACGGACCAGCACT
TAAAGCACAAAATAAAATTTGCCGAATTTCGGGAAGATTGCTTCAAAGCT
AATTTTCGCAATACAAGACCTATACATACATTCATGTGCAAAAGTTGCAA
AAAAACGTCGATTAATGTTCTGATTGGTTGAAAATTGCACATATAGACTT
TTTTTTTCAAAGTTTTATAAGTATGAGGTGATCTTTGCGTGTCTCACCTA
ATCATTTTCAATAGCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036683TCONS_00036683Clytia hemisphaericatranscript
TCONS_00036682TCONS_00036682Clytia hemisphaericatranscript
TCONS_00036681TCONS_00036681Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036682-proteinTCONS_00036682-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001496supercontigsc0001496:33395..41910 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.11	1.22	0.37	0.31	9.26	6.51	4.27	5.43	2.73	5.36	2.77	2.5	1.62	1.89	1.76	1.8	3.04	1.72	1.05	1.06	1.14	1.11	1.13	1.11	9.26	9	1.22	0.72	1.01	0.93