TCONS_00036682 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036682
Unique NameTCONS_00036682
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3647

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036682 ID=TCONS_00036682|Name=TCONS_00036682|organism=Clytia hemisphaerica|type=transcript|length=3647bp
TGGACtaaataattattcaacaggacgtcctctttgaaaaaaggtctatt
tttttgtttccttgagTTGAAGACTTCCTGTTTTGGAAGCTTTCTTTTTA
GTTTATAGTTTTCTCACAACCTAACTTCTAACTTATAGACTTTAAAAGAC
CATGTAGTTCTTCCTGGCTCCTTGGGAGTTAAAAGCTCTGATGGAAAATT
AAGTTTTGGCAACTTTTTATCCCTCTTTTAGATGTAATACAATATAATTT
GAATGGAGCCCAAACTGAAGTGGAAACGTGTTGCCTTTTGTTATTGTGGA
TGCATTCCAACCAACCCACACATACACTGTCCATGTCCAGGATGCGAGGA
CAGAGCTGTCAGTATACGAACAGAATTAAGACATAGGAAGCAATATGCTG
AGTTCAGTCTCAGCTCTGAACCATGTGTCTCCGGAGACGAATCACCAAAC
CAATCATGTGAAGATGAATCAAACCAATCAACTCGAGATCAATCAGACCT
ATCAATTCAAGATGAATCAGACCTATCGATTCAAGATCAATCAGACCAAT
CAAGTCAAGATGGAGATCCTCAAGAGCTTGAAAATCCTGTAACTCATAAC
GAGTTTGAACAACAACAGCTAGAAGAAGATGGACATCAACAGGATGAGCA
AAGAATTGATGTAGACAATGCATTTGACAAGGAAGAGTTTGTCTTGTCAC
ATTTGATTAGAACCTTGTCCTTGGCCTCTGAGATGAATGCATCCACAAAT
CAAACAAACGAATTACTAAGCTATGTTGGTGAGCTGATAAAACTAGAATC
TGTGGACGTGAAAAGGGAATGGCCAACAAGTTCTGCCAGTGCATCGTCAG
TTTTGAAACAACTTGGTCTGCTGTCTGCTCCCACACACCACAAGATATGT
TTCAGCAAAGATCATCCTCAATACTGGTATGCATGTGATGACAAAACATC
CTGCCCTGATTGTGACAGGCTTCCTGAGATCGACCGATATTATTTGTCTT
TGGgggacaaaatgaaaaagtggTTTTCTTCAGTTTCAATGTCATCATTA
TTACTGGGGCATTGGAAATACCGGGAACAATGGCTAGGCAAAAGAGGACC
AACTTGGCCAATGAGTGAGATTTAGCATGGCTCAAAATTCAAAGATCTAC
AATGGTTTTGGGATCCTGAAGCTACCTGGCCACTGCCCCATAAGTGTCGA
GAATGTCGCAGATATAATGATTTGGTATCTTTGGCCATTCCAAATGATCA
AACACGTTTTGAATTCACTTGCAAACACTGCAACAATAAAGAGTTTATTG
ATGTAAATTTTGTTCAAGGTGACCCAAGGAATATTGGTCTAATTGGACAT
TGGGATGGCTGGCAACCTAAATTTGGAAGGGGAATCTCGTATGGTTCTGG
CTCAATCGAACTTACCGTTGCCAATATGGAAAAAGAGAAGCGCTGTCTTG
acgaaaatgtttttgtttccaGTTTTGTACCAGAACACAAGTTGCCAAAT
AAACAGCCTAGTGCACTCGATCCGTTCCTTGATCCTCTTGTTACTGAACT
TGAAGAACTGTTCATTAATGGCATCGAAGTAGATTATCCAATTGATGTAC
CAGAGTCTCCATTGAAAAAGGGGAAGTGTAGAATTAGATGCATTCTTATC
TGTTGGACTGGAGACTACCCAGCACGATGCcagattggaaaattttctaa
gaaGGGTACCTTTGGTTGTAGAACAGATAAATGCAAAGGCGAGTCAGTAT
CAGGCAGCACAACCAAATACTACCTCAATAATCGCCATCACTTTACCAGT
CCGTGGAACAAGAGGGAAATGTATGACGAATACGATGTGATGGAAGAAAT
CGAATTTTCAGAATCGTATGCCAGAAAGAAACAACGCGCAAAAGAAACTG
GGTATATTGGTATGACTCTATTGGCAAGCCTTTATGATTGATGTATATAG
TTTTAATCCATTCACCGATATGTNGAATTTTCAGAATCGTATGCCAGAAA
GAAACAACGCGCAAAAGAAACTGGGTATACTGGTATGACTCTATTGGCAA
GCCTTTATGATGTATATAGTTTTAATCCATTCACCGATATGGTTCGTGAT
GTAATGCACTGTGTTCTTTTGAATTGTTGTAAAAAACTCTTCACCAGATA
TTTCAAAAACCCGGAATTCGATATGGCAAAGTTGCAAGAAAATGTAGATA
ACTTTCCATTCACCTCAGGTATGTTGGATGGTCACTGTCCCTAGAAGCTC
GCCAAGTACAACTCATGGACGGCTGAAGAGTGGCAGAAGTTTACCTTCCC
TATGGCTGAAGTTGTTTTTATCGATCTAGTTTCTGAAGATGAGCTTCACC
TTGTCTGGCTGACTGCCAGAATGGTCGAACTTCTCTTCCACCGTCGAGAT
GCTTTAAGTGAGGAGGAAGTACAGCATCTCGAAAATATATGTTGGCGGCG
ACTCATACTACTGGAAGAGCAAGTTGACCCCAAACAATGTGTGATCACCG
CACACAATTCCATTCATATTGCAGAGGATATATTGAAGTTTGGGCCCAGT
GATAACTTTTGGtgttttcaaaatgaaagagcTGTAAAAAGGTACAAGGA
TCTTCCAACAAATTTCAAGAACATTGAATGCACATTTTCAAAGGCCGAAC
TCCGAAGAGAGCTGTTGATGACGCTGAAACCCAAAGGTCAAAAGTTCGCT
TTCAAACTCATCGATGAAGTAAATATGATCTCTAGCAGTCTTGATGGAGC
AAAGGCAATAGCTTGGAATACAAGGCTAGCTGGTAGAAGCGTTTCAGATT
TGGTTGTATTTATCGGAGCATCGTCCTTGGATACCGTACATTTATCTGAT
GACATGCTTAGGAGACGTGTTGAAGCAGATGGCCTTGGACCTGGTGATAT
ATATCAATCATTTCGATCGTGCTACTTTGCAGGTTCCAGGAAACATGTTA
AGTCAGgcagttgttttttatttaatgaCGGATCAATTTGTATGGTTAAA
GAACTGATTTTTGTGAAACATTCTACTGGCTCTTCGAAATATATTCGTTT
GGAAAAATTCGAACGAGACAACGATGGATTATTGATTCAAGGTTTCCAAA
TATATTCTCACGATGCAACAGTGTTCATTGGATCTCTGCTCGATGTAATA
CGCGAAGTCATAATGTATCCCTACGACGATGACCAATTTATCTGTATAGA
TGTCAATCGGGGTCATTTCAATTTCGGTTTTCCAGTTTTGCCTTAAGTTT
TTATACGTCTTATGTAAACAAGATGATGCTCTCGTTTTATTGGCTTAAGG
TTTTACGTATAACAAATCAGAATAATTATTTGAGCatatcaatttaaaaa
atttcagagaATCAGACACATATCTTTCACTAAGACTAAGCCTTAAGGCT
AAATTGATTGTTGGTCTTACGGACCAGCACTTAAAGCACAAAATAAAATT
TGCCGAATTTCGGGAAGATTGCTTCAAAGCTAATTTTCGCAATACAAGAC
CTATACATACATTCATGTGCAAAAGTTGCAAAAAAACGTCGATTAAtgtt
ctgattggttgaaaattgCACATatagactttttttttcaaagttttata
aGTATGAGGTGATCTTTGCGTGTCTCACCTAATCATTTTCAATAGcc
Run BLAST on NCBI

protein sequence of TCONS_00036682-protein

>TCONS_00036682-protein ID=TCONS_00036682-protein|Name=TCONS_00036682-protein|organism=Clytia hemisphaerica|type=polypeptide|length=314bp
MAEVVFIDLVSEDELHLVWLTARMVELLFHRRDALSEEEVQHLENICWRR
LILLEEQVDPKQCVITAHNSIHIAEDILKFGPSDNFWCFQNERAVKRYKD
LPTNFKNIECTFSKAELRRELLMTLKPKGQKFAFKLIDEVNMISSSLDGA
KAIAWNTRLAGRSVSDLVVFIGASSLDTVHLSDDMLRRRVEADGLGPGDI
YQSFRSCYFAGSRKHVKSGSCFLFNDGSICMVKELIFVKHSTGSSKYIRL
EKFERDNDGLLIQGFQIYSHDATVFIGSLLDVIREVIMYPYDDDQFICID
VNRGHFNFGFPVLP
Run BLAST on NCBI

transcript from alignment at sc0001496:33395..41910-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036682 ID=TCONS_00036682|Name=TCONS_00036682|organism=Clytia hemisphaerica|type=transcript|length=8516bp|location=Sequence derived from alignment at sc0001496:33395..41910- (Clytia hemisphaerica)
TGGACTAAATAATTATTCAACAGGACGTCCTCTTTGAAAAAAGGTCTATT
TTTTTGTTTCCTTGAGTTGAAGACTTCCTGTTTTGGAAGCTTTCTTTTTA
GTTTATAGTTTTCTCACAACCTAACTTCTAACTTATAGACTTTAAAAGAC
CATGTAGTTCTTCCTGGCTCCTTGGGAGTTAAAAGCTCTGATGGAAAATT
AAGTTTTGGCAACTTTTTATCCCTCTTTTAGATGTAATACAATATAATTT
GAATGGAGCCCAAACTGAAGTGGAAACGTGTTGCCTTTTGTTATTGTGGA
TGCATTCCAACCAACCCACACATACACTGTCCATGTCCAGGATGCGAGGA
CAGAGCTGTCAGTATACGAACAGAATTAAGACATAGGAAGCAATATGCTG
AGTTCAGTCTCAGCTCTGAACCATGTGTCTCCGGAGACGAATCACCAAAC
CAATCATGTGAAGATGAATCAAACCAATCAACTCGAGATCAATCAGACCT
ATCAATTCAAGATGAATCAGACCTATCGATTCAAGATCAATCAGACCAAT
CAAGTCAAGATGGAGATCCTCAAGAGCTTGAAAATCCTGTAACTCATAAC
GAGTTTGAACAACAACAGCTAGAAGAAGATGGACATCAACAGGATGAGCA
AAGAATTGATGTAGACAATGCATTTGACAAGTAAGTTTCCAGAAAGTAGG
TAAAATTCTAATGGTTCTTTTCAGTGAAATGTGTATAATCAGTGAAATGT
GTATAAGAGCATACAGTAAAATGGAGGTTAATGCGGCTCTTTGTCCTTAT
GCACCTATAAACCCTTACCTTACCACTTTTGAGGTGACTGGTAATGAAAA
TACAAGAAAAATTCTTCTCAACAACAGTATCAAGTGTAGGAAGGCTCTTG
TGAAAAAAAATGTAAGATACCTTTGCATGAAGCGATGAAGTAACGTTGAT
ATACCTTAAGTGGATAAATTTGGCGGGGATTTAATTTGGCGAATTACCGA
ATCTGGAAATTTTGGCGGGGATTAAATTTGGCAAATTTGGCGAATTTTGC
CAAAATTCGCCAAATTAAATCCTCGCCAAAATTTCCAGATTCGGTAATTC
GCCAAATTAAATCCCCGCCAAATTTAACAAAAAGGGAATTATGTGAAAAA
TCACAACTTTTTAGCATATTTTTGAGTAATTTTCACCCATTTCAANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNATTCCCACTCACGGCAGTTCACTTGGCAAGTGA
ACGTTCCTTTGCCCGGGTCAACCCATGCCATGTGAGGGGAATTGGGTAGT
CAGTTCAAGGTGCTGACGGGAGCTCATTAGTAAGCATCTATAGTTGCGAG
AATAGGCCTCTAAAGCCTCCTGCAACTCAACCAAATAGAAATAGAAATAT
GACCACAGGTAATATCTTTGAATATTTTTTGCATCATGCAATATTAATTG
AAATATGTTTCAGATTGATAACCCTTGGCTTAGCAGATGACTTTCCTCCA
CAAATTTTCGGTTATTTAATTCTGGTCTGTAAATTAAATGGCTACCCCAA
TAAGTAGCCCAATTGGGGCTACCTTACCTTTTAGGAATACCAATGATTCT
TCTTGATTATTTGGTTTAATCTTATTCAGACCATTCATTTCATCTTTTAG
GGAAGAGTTTGTCTTGTCACATTTGATTAGAACCTTGTCCTTGGCCTCTG
AGATGAATGCATCCACAAATCAAACAAACGAATTACTAAGCTATGTTGGT
GAGCTGATAAAACTAGAATCTGTGGACGTGAAAAGGGAATGGCCAACAAG
TTCTGCCAGTGCATCGTCAGTTTTGAAACAACTTGGTCTGCTGTCTGCTC
CCACACACCACAAGATATGTTTCAGCAAAGATCATCCTCAATACTGGTAT
GCATGTGATGACAAAACATCCTGCCCTGATTGTGACAGGCTTCCTGAGAT
CGACCGATATTATTTGTCTTTGGGGGACAAAATGAAAAAGTGGTTTTCTT
CAGTTTCAATGTCATCATTATTACTGGGGCATTGGAAATACCGGGAACAA
TGGCTAGGCAAAAGAGGACCAACTTGGCCAATGAGTGAGATTTAGCATGG
CTCAAAATTCAAAGATCTACAATGGTTTTGGGATCCTGAAGCTACCTGGC
CACTGCCCCATAAGTGTCGAGAATGTCGCAGATATAATGATTTGGTATCT
TTGGCCATTCCAAATGATCAAACACGTTTTGAATTCACTTGCAAACACTG
CAACAATAAAGAGTTTATTGATGTAAATTTTGTTCAAGGTGACCCAAGGA
ATATTGGTCTAATTGGACATTGGGATGGCTGGCAACCTAAATTTGGAAGG
GGAATCTCGTATGGTTCTGGTAAGTCAACATCAATTTGAAAAGCCAATTT
TTTTAGATCTGGAAACTCAATTGAATTATATTATCTAATATCTTTCAGTT
TGTAAAGGCTGATTTTGAAAGGCTGTTTTGTGCTTTTAAGGAATGTCAAC
AGGTGTTATTTTCATTGCCAAGGGTTACTAAGAATAAGCCAATTAATTTT
GCTTTGCTTGGCCAAAAATTTCTTAATTTGATATGCAATACCATGTGCAG
AATTTTAGGGCTAAAGAACTATAATCTTTTTCATGTTTATTTGTCTCCAC
AATTATCCAGTATCAATCTTTCCGTGATCTTTACGATGTCTTTTTTTTCT
AAATTCATTTTTTGCTTATTTTTTTGTTGAGCAAAAGAAAGTAGCTTTTT
TTCATTTTCTGTTCAGGTCACAAATACAACTACAAAATTTTATGCATTCT
GGATTAGGATATAATAAAAATCACAAAGATCGACAAGCCAAAAGACATTG
TTTAAGGTCTACAGTAGCACTTATTTGAGGAAAGAAATTGCATGGATTAA
TTTTGGCCTAAATTAATTTAATTAACTTAAACCTCAAAGGTAATTAACTA
ATTGATATGAATCACAAGAGATTGATTGATTTTCTGTTTCTTTTAGGCTC
AATCGAACTTACCGTTGCCAATATGGAAAAAGAGAAGCGCTGTCTTGACG
AAAATGTTTTTGTTTCCAGTTTTGTACCAGAACACAAGTTGCCAAATAAA
CAGCCTAGTGCACTCGATCCGTTCCTTGATCCTCTTGTTACTGAACTTGA
AGAACTGTTCATTAATGGTAGGTAACTTTGCTAAGATAACAGCGAGGATC
ACTACTTAAATCTCAGATATTATGACATTTTGTGACATAATGATATGTCA
GAAAATCTCCAAAATGTTTTTAACATAACATTTGAGATGTTTTCTAGCTG
TTCTAGTACACTTNGTCAGAAAATCTCCAAAATGTTTTTAACGTAACATT
TGAGATGTTTTCTAGCTGTTCTAGTACACTTATACTAAAATTAGAGATTT
TTATTATTTCATGAATTTTATTGGTTATTTTTTTGTACTTTTTCAAAAAA
TCAAACTTTTCTCCTTTGAAGAAATCTAAAATNACTTATTTTTTGTTGAG
CAAAAGAAAGTAGCATTTTTTCATTTTCTGTTCAGGTCACAGATACAACT
ACAAAATTTTATGCATTCTGGATTAGGATATAATAAAAATCACAAAGATC
GACAAGCCAAAAGACATTGTTTAAGGTCTACAGTAGCACTTATTTGAGGA
AAGAAATTGCATGGATTAATTTTGGCCTAAATTAATTTAATTAACTTAAA
CCTCAAAGGTAATTAACTAATTGATATGAATCACAAGAGATTGATTGATT
TTCTGTTTCTTTTAGGCTCAATCGAACTTACCGTTGCCAATATGGAAAAA
GAGAAGCGCTGTCTTGACGAAAATGTTTTTGTTTCCAGTTTTGTACCAGA
ACACAAGTTGCCAAATAAACAGCCTAGTGCACTCGATCCGTTCCTTGATC
CTCTTGTTACTGAACTTGAAGAACTGTTCATTAATGGTAGGTAACTTTGC
TAAGATAACAGCGAGGATCACTACTTAAATCTCAGATATCATGACATTTT
GTGACATAATGATATGTCAGAAAATCTCCAAAATGTTTTTAACATAACAT
TTGAGATGTTTTCTAGCTGTTCTAGTACACTTATACTAAAATTAGAGATT
TTTATTATTTCATGAATTTTATTGGTTATTTTTTTGTACTTTTTCAAAAA
ATCAAACTTTTCTCCTTTGAAGAAATCTAAAATGTGGTAGAGGCTCTTTT
CAAAAACCTTTTAGTCCTTATATGTCTGAGATCTTAGTACTTGCCCACCT
GATTGTAAGATGTTTTGATATTCAAAAGAGCTGTAAGTTGCTTGCATCAT
TTGCCATTGTGTATCGAGGTGTAATGAAAACTTTTTTTTTTGGAAAAGTA
TTATTACTGCAATATTAGGTAAATAATGAATTTCTTAGTGAAAACATAAA
TTCTTTGAGTATGTTGGAAATTGGTTTGACTACTGACACCCAAAGTTTTC
ATCTGATACATAAAAAGATGGATAGATTTAATATTGAAATCTCATTGAAT
ACAGTTACTCTTATTAAACTTCTCAATTTTCACAGGCATCGAAGTAGATT
ATCCAATTGATGTGCCAGAGTCTCCATTGAAAAAGGGGAAGTGTAGAATT
ANTTTCACAGGCATCGAAGTAGATTATCCAATTGATGTACCAGAGTCTCC
ATTGAAAAAGGGGAAGTGTAGAATTAGATGCATTCTTATCTGTTGGACTG
GAGACTACCCAGCACGATGCCAGATTGGAAAATTTTCTAAGAAGGGTACC
TTTGGTTGTAGAACAGATAAATGCAAAGGTATGTACCAACTTGCTTGTTG
TGGCGATGATTATCACATTTAGCCTTGTGCTAGTTTTCTTATTGACGTTA
CGTGAAGACCAATAGCTTTTTAGTTTACTAACATGGGAAGTTTCAAAATC
TACAATTTGTATGGAATGAGCCTTCCATTTCCAGCCCAAATTTCAAGTCA
CCTTATACTTTATAAATGGCGAACTTTAAGTCTGAGAAACTGGATTTCAA
TGCTTCTATCAAATTGGGAAATTGGAAAAATTGGGTCGCTTGTTAGGTTT
CAGCTATCTTAACCTACACTATGTAAATACACTACGTTTAGCCTCAAATT
CGCTTGTCAGGCCTTGTGACCCCATTACAGGCCTTTTAGAACACCTCCCA
TCCACTCATTTTTGCTATGTCACAATAAATTTTTCAATTTTCAAATTTTC
TTATGCTAACGTCAGCACTTATTAATAACTTCTGAGAAATAAAGACAGTA
TCAAAAATAGTATGTTGTTTTGTTGTTGAGATATGAATAAGTTGCTGGAA
AATGAGATTCTTTCAGATTCTTTGTTGATTAGGCATTTTTTTATAAATTC
TTTGAAACATTCATGGTTAACAGGCTAAAAGCGGAACTAAATTAGTTACT
GATAAAGTGATATCAAGAAATATAGGACTCCTGAAACCTATTTTGCTTTC
ACGGAAACAACTGTACGAGATGATTTTTTTTCCTTATTTTTTGCAGGCGA
GTCAGTATCAGGCAGCACAACCAAATACTACCTCAATAATCGCCATCACT
TTACCAGTCCGTGGAACAAGAGGGAAATGTATGACGAATACGATGTGATG
GAAGAAATCGAATTTTCAGAATCGTATGCCAGAAAGAAACAACGCGCAAA
AGAAACTGGGTATATTGGTATGACTCTATTGGCAAGCCTTTATGATTGAT
GTATATAGTTTTAATCCATTCACCGATATGTNGAATTTTCAGAATCGTAT
GCCAGAAAGAAACAACGCGCAAAAGAAACTGGGTATACTGGTATGACTCT
ATTGGCAAGCCTTTATGATGTATATAGTTTTAATCCATTCACCGATATGG
TTCGTGATGTAATGCACTGTGTTCTTTTGAATTGTTGTAAAAAACTCTTC
ACCAGATATTTCAAAAACCCGGAATTCGATATGGCAAAGTTGCAAGAAAA
TGTAGATAACTTTCCATTCACCTCAGGTAATTAACATATTTTGCTCTTTT
GACATTATTTGAGTTAACCGAGTTTTGATAAAGCCATTACTAAAGCTAAC
TTTCAAATTTAAGTCTTTTTAATTTTTAATTTTTGTTTTTATTGTATTTG
TCAAATTTAGATGACCATTTCTAAGATGTTTTCTAAATTAATAAATTTCG
ATTCTAGGTATGTTGGATGGTCACTGTCCCTAGAAGCTCGCCAAGTACAA
CTCATGGACGGCTGAAGAGTGGCAGAAGTTTACCTTCCCTATGGCTGAAG
TTGTTTTTATCGATCTAGTTTCTGAAGATGAGCTTCACCTTGTCTGGCTG
ACTGCCAGAATGGTCGAACTTCTCTTCCACCGTCGAGATGCTTTAAGTGA
GGAGGAAGTACAGCATCTCGAAAATATATGTTGGCGGCGACTCATACTAC
TGGAAGAGCAAGTTGACCCCAAACAATGTGTGATCACCGCACACAATTCC
ATTCATATTGCAGAGGATATATTGAAGTTTGGGCCCAGTGATAACTTTTG
GTGTTTTCAAAATGAAAGAGCTGTAAAAAGGTAGTTTGATAACTTTATTA
AATTTGATTATCGAGTAAGGTTAAAATATTTTCTCTTCACTTATTTTACT
AACGTTCATAAAGGCGCAAACTTGGGCGAAAAGTGTTTTTAACGTTTATA
GCAACTTAAACTAAAGATGGTTTAACTGTAACTAACTTTAACTGTTCGAG
TTAAAGAGATTCCATTGTATTACGACATCTATAGGTACAAGGATCTTCCA
ACAAATTTCAAGAACATTGAATGCACATTTTCAAAGGCCGAACTCCGAAG
AGAGCTGTTGATGACGCTGAAACCCAAAGGTCAAAAGTTCGCTTTCAAAC
TCATCGATGAAGTAAATATGGTATGAAATGTTTTTGTTATGAGTGACCAC
TTTTCCTTTAAAGCTGTTTAAAGACAAATTTTCGAACATGAAATTATGTG
AAATTTTTTTTTGCAAATTCCCATCACAAAGAATCCATTTACCCAATCGT
TTCTGAGGTTTACAACAACGATAAAAGCATGTCTTATTATAGGAATTTTA
GGAAAACTGTATAAGAAGTGCATTGATATTGTTTCTTTCTATTTAGATCT
CTAGCAGTCTTGATGGAGCAAAGGCAATAGCTTGGAATACAAGGCTAGCT
GGTAGAAGCGTTTCAGATTTGGTTGTATTTATCGGAGCATCGTCCTTGGA
TACCGTACATTTATCTGATGACATGCTTAGGAGACGTGTTGAAGCAGATG
GCCTTGGACCTGGTGATATATATCAATCATTTCGATCGTGCTACTTTGCA
GGTTCCAGGAAACATGTTAAGTCAGGCAGTTGTTTTTTATTTAATGACGG
ATCAATTTGTATGGTTAAAGAACTGATTTTTGTGAAACATTCTACTGGCT
CTTCGAAATATATTCGTTTGGAAAAATTCGAACGAGACAACGATGGATTA
TTGATTCAAGGTTTCCAAATATATTCTCACGATGCAACAGTGTTCATTGG
ATCTCTGCTCGATGTAATACGCGAAGTCATAATGTATCCCTACGACGATG
ACCAATTTATCTGTATAGATGTCAATCGGGGTCATTTCAATTTCGGTTTT
CCAGTTTTGCCTTAAGTTTTTATACGTCTTATGTAAACAAGATGATGCTC
TCGTTTTATTGGCTTAAGGTTTTACGTATAACAAATCAGAATAATTATTT
GAGCATATCAATTTAAAAAATTTCAGAGAATCAGACACATATCTTTCACT
AAGACTAAGCCTTAAGGCTAAATTGATTGTTGGTCTTACGGACCAGCACT
TAAAGCACAAAATAAAATTTGCCGAATTTCGGGAAGATTGCTTCAAAGCT
AATTTTCGCAATACAAGACCTATACATACATTCATGTGCAAAAGTTGCAA
AAAAACGTCGATTAATGTTCTGATTGGTTGAAAATTGCACATATAGACTT
TTTTTTTCAAAGTTTTATAAGTATGAGGTGATCTTTGCGTGTCTCACCTA
ATCATTTTCAATAGCC

Coding sequence (CDS) from alignment at sc0001496:33395..41910-

>TCONS_00036682 ID=TCONS_00036682|Name=TCONS_00036682|organism=Clytia hemisphaerica|type=CDS|length=2835bp|location=Sequence derived from alignment at sc0001496:33395..41910- (Clytia hemisphaerica)
ATCTCTAGCAGTCTTGATGGAGCAAAGGCAATAGCTTGGAATACAAGGCT
AGCTGGTAGAAGCGTTTCAGATTTGGTTGTATTTATCGGAGCATCGTCCT
TGGATACCGTACATTTATCTGATGACATGCTTAGGAGACGTGTTGAAGCA
GATGGCCTTGGACCTGGTGATATATATCAATCATTTCGATCGTGCTACTT
TGCAGGTTCCAGGAAACATGTTAAGTCAGGCAGTTGTTTTTTATTTAATG
ACGGATCAATTTGTATGGTTAAAGAACTGATTTTTGTGAAACATTCTACT
GGCTCTTCGAAATATATTCGTTTGGAAAAATTCGAACGAGACAACGATGG
ATTATTGATTCAAGGTTTCCAAATATATTCTCACGATGCAACAGTGTTCA
TTGGATCTCTGCTCGATGTAATACGCGAAGTCATAATGTATCCCTACGAC
GATGACCAATTTATCTGTATAGATGTCAATCGGGGTCATTTCAATTTCGG
TTTTCCAGTTTTGCCTTAAGTACAAGGATCTTCCAACAAATTTCAAGAAC
ATTGAATGCACATTTTCAAAGGCCGAACTCCGAAGAGAGCTGTTGATGAC
GCTGAAACCCAAAGGTCAAAAGTTCGCTTTCAAACTCATCGATGAAGTAA
ATATGATGGCTGAAGTTGTTTTTATCGATCTAGTTTCTGAAGATGAGCTT
CACCTTGTCTGGCTGACTGCCAGAATGGTCGAACTTCTCTTCCACCGTCG
AGATGCTTTAAGTGAGGAGGAAGTACAGCATCTCGAAAATATATGTTGGC
GGCGACTCATACTACTGGAAGAGCAAGTTGACCCCAAACAATGTGTGATC
ACCGCACACAATTCCATTCATATTGCAGAGGATATATTGAAGTTTGGGCC
CAGTGATAACTTTTGGTGTTTTCAAAATGAAAGAGCTGTAAAAAGATCTC
TAGCAGTCTTGATGGAGCAAAGGCAATAGCTTGGAATACAAGGCTAGCTG
GTAGAAGCGTTTCAGATTTGGTTGTATTTATCGGAGCATCGTCCTTGGAT
ACCGTACATTTATCTGATGACATGCTTAGGAGACGTGTTGAAGCAGATGG
CCTTGGACCTGGTGATATATATCAATCATTTCGATCGTGCTACTTTGCAG
GTTCCAGGAAACATGTTAAGTCAGGCAGTTGTTTTTTATTTAATGACGGA
TCAATTTGTATGGTTAAAGAACTGATTTTTGTGAAACATTCTACTGGCTC
TTCGAAATATATTCGTTTGGAAAAATTCGAACGAGACAACGATGGATTAT
TGATTCAAGGTTTCCAAATATATTCTCACGATGCAACAGTGTTCATTGGA
TCTCTGCTCGATGTAATACGCGAAGTCATAATGTATCCCTACGACGATGA
CCAATTTATCTGTATAGATGTCAATCGGGGTCATTTCAATTTCGGTTTTC
CAGTTTTGCCTTAAGTACAAGGATCTTCCAACAAATTTCAAGAACATTGA
ATGCACATTTTCAAAGGCCGAACTCCGAAGAGAGCTGTTGATGACGCTGA
AACCCAAAGGTCAAAAGTTCGCTTTCAAACTCATCGATGAAGTAAATATG
ATGGCTGAAGTTGTTTTTATCGATCTAGTTTCTGAAGATGAGCTTCACCT
TGTCTGGCTGACTGCCAGAATGGTCGAACTTCTCTTCCACCGTCGAGATG
CTTTAAGTGAGGAGGAAGTACAGCATCTCGAAAATATATGTTGGCGGCGA
CTCATACTACTGGAAGAGCAAGTTGACCCCAAACAATGTGTGATCACCGC
ACACAATTCCATTCATATTGCAGAGGATATATTGAAGTTTGGGCCCAGTG
ATAACTTTTGGTGTTTTCAAAATGAAAGAGCTGTAAAAAGATCTCTAGCA
GTCTTGATGGAGCAAAGGCAATAGCTTGGAATACAAGGCTAGCTGGTAGA
AGCGTTTCAGATTTGGTTGTATTTATCGGAGCATCGTCCTTGGATACCGT
ACATTTATCTGATGACATGCTTAGGAGACGTGTTGAAGCAGATGGCCTTG
GACCTGGTGATATATATCAATCATTTCGATCGTGCTACTTTGCAGGTTCC
AGGAAACATGTTAAGTCAGGCAGTTGTTTTTTATTTAATGACGGATCAAT
TTGTATGGTTAAAGAACTGATTTTTGTGAAACATTCTACTGGCTCTTCGA
AATATATTCGTTTGGAAAAATTCGAACGAGACAACGATGGATTATTGATT
CAAGGTTTCCAAATATATTCTCACGATGCAACAGTGTTCATTGGATCTCT
GCTCGATGTAATACGCGAAGTCATAATGTATCCCTACGACGATGACCAAT
TTATCTGTATAGATGTCAATCGGGGTCATTTCAATTTCGGTTTTCCAGTT
TTGCCTTAAGTACAAGGATCTTCCAACAAATTTCAAGAACATTGAATGCA
CATTTTCAAAGGCCGAACTCCGAAGAGAGCTGTTGATGACGCTGAAACCC
AAAGGTCAAAAGTTCGCTTTCAAACTCATCGATGAAGTAAATATGATGGC
TGAAGTTGTTTTTATCGATCTAGTTTCTGAAGATGAGCTTCACCTTGTCT
GGCTGACTGCCAGAATGGTCGAACTTCTCTTCCACCGTCGAGATGCTTTA
AGTGAGGAGGAAGTACAGCATCTCGAAAATATATGTTGGCGGCGACTCAT
ACTACTGGAAGAGCAAGTTGACCCCAAACAATGTGTGATCACCGCACACA
ATTCCATTCATATTGCAGAGGATATATTGAAGTTTGGGCCCAGTGATAAC
TTTTGGTGTTTTCAAAATGAAAGAGCTGTAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021658XLOC_021658Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036682-proteinTCONS_00036682-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036682-exon-sc0001496-1575043694:41231..41910TCONS_00036682-exon-sc0001496-1575043694:41231..41910Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1575043694:39042..39760TCONS_00036682-exon-sc0001496-1575043694:39042..39760Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1575043694:37475..37645TCONS_00036682-exon-sc0001496-1575043694:37475..37645Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1575043694:36633..36800TCONS_00036682-exon-sc0001496-1575043694:36633..36800Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1575043694:35435..35914TCONS_00036682-exon-sc0001496-1575043694:35435..35914Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1575043694:34881..35253TCONS_00036682-exon-sc0001496-1575043694:34881..35253Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1575043694:34541..34676TCONS_00036682-exon-sc0001496-1575043694:34541..34676Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1575043694:33395..34314TCONS_00036682-exon-sc0001496-1575043694:33395..34314Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1510915933:41231..41910TCONS_00036682-exon-sc0001496-1510915933:41231..41910Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1510915933:39042..39760TCONS_00036682-exon-sc0001496-1510915933:39042..39760Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1510915933:37475..37645TCONS_00036682-exon-sc0001496-1510915933:37475..37645Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1510915933:36633..36800TCONS_00036682-exon-sc0001496-1510915933:36633..36800Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1510915933:35435..35914TCONS_00036682-exon-sc0001496-1510915933:35435..35914Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1510915933:34881..35253TCONS_00036682-exon-sc0001496-1510915933:34881..35253Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1510915933:34541..34676TCONS_00036682-exon-sc0001496-1510915933:34541..34676Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1510915933:33395..34314TCONS_00036682-exon-sc0001496-1510915933:33395..34314Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1491911889:41231..41910TCONS_00036682-exon-sc0001496-1491911889:41231..41910Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1491911889:39042..39760TCONS_00036682-exon-sc0001496-1491911889:39042..39760Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1491911889:37475..37645TCONS_00036682-exon-sc0001496-1491911889:37475..37645Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1491911889:36633..36800TCONS_00036682-exon-sc0001496-1491911889:36633..36800Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1491911889:35435..35914TCONS_00036682-exon-sc0001496-1491911889:35435..35914Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1491911889:34881..35253TCONS_00036682-exon-sc0001496-1491911889:34881..35253Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1491911889:34541..34676TCONS_00036682-exon-sc0001496-1491911889:34541..34676Clytia hemisphaericaexon
TCONS_00036682-exon-sc0001496-1491911889:33395..34314TCONS_00036682-exon-sc0001496-1491911889:33395..34314Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001496supercontigsc0001496:33395..41910 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.39359e-06	1.22288	5.75055e-10	0.311229	1.1564e-07	0.000597107	0.000148467	1.58979e-07	0	3.79e-08	1.68116	5.53419e-06	0.868503	0	4.85259e-06	0.420231	0.685486	1.14882e-09	3.02539e-06	1.98283e-08	7.66823e-08	4.90165e-08	5.18871e-08	0.670417	3.83156	1.25041e-08	2.84629e-09	4.61551e-09	6.71194e-08	7.25097e-06
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036682 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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