XLOC_021552 (gene) - C. hemisphaerica

Overview
NameXLOC_021552
Unique NameXLOC_021552
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001478:18179..28231-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021552 ID=XLOC_021552|Name=XLOC_021552|organism=Clytia hemisphaerica|type=gene|length=10053bp|location=Sequence derived from alignment at sc0001478:18179..28231- (Clytia hemisphaerica)
ATTGCATAGAGTATGTTTGATCCACGCAAGGACTCATGTTGGTTTGGCCT
AAAGAGGTAAAATAAGATCTCCTTTTTATCTCATTAAGGCCAGGGCAAAC
CAGTCCAACATTTCATCCAACATGATTTTCAAATGTTGGATGAAATGTTT
GATGGAAAAACTTGCGTTGGATGAAGCAAAAATCAAGGCCGGGGCAAACC
GATCCAACATTTCATCCAACATGAGTTTCAAATGTTGGATGCAATGTTTG
ATGGAAAAACTTGCGTTGGATGAAGCAAAAATCAAGGCCGGGGCAAACCG
ATCCAACATTTCATCCGACATGACTTGGAAAAAAATGAAAATTCCAAAAA
ATGAAGAAAAAAGTACTCCCAAAAACCAATCCAACACGAAAAATTTCACA
ATTCAATGAGAGAGCCTCTTTGATCTCGCCGCAAATGTTGGATGAAATTT
TTGATGGCGATCAAACTTCATCCAACACCGTCCAGCACGATTTTTTTCTT
CTTTTTTTGAATTTTCGTTTTTTTTCCAAAAATTTTAATTGACGCAAACC
GGTCCAACATTTCATCCAACATCAGAAAAAGGCATGTTTATGTTTATGTT
TCTTTTCTTTAAAGTTGATGCAAAGTAGTACAATGTGTACTTAGCTCGAG
GCTAATCAATATCAAGCATGTTGGATGAAATATTGGATCGGTTTGCCCTG
GCCTTTAAAGTAGCATTCACACGTGGGACAAGTAAAGATTCCCTCATTTT
TGATAATATGAATCTTCTTTATATTGAAAATGCGATTATTAAATTCAAAC
CATTTATAAAAGTAATAATGCGGCTTTGTCTGACTTAGTAATTATGTTTA
ATTTGCTTAAAGCAAACTTCTATTCATTTCAGGATCATACTGGGTCACAC
AGCAGGAAGTATTTACAGTGCACTTGTATCGAGAAAACTTTTTTCCAGAG
TTCAACACTCTCAATGTGCTGATGAAACAACCATCCATATATTCAGCTGA
GACATACGTAATATTATGTAAGAGCTTGTTTATTTACGTCAACCAGGACT
TCCTATAAAATACATTTTTGTCAGTGATGAATAGGCTTAAATGTATTTCT
AAAATCATCTTAAACAAATTTGTAAAGGGTGCAGTGCCTCTTGTAAATCA
TTATCTAATGTAATTAAATGGTGCCAAACTGTAATTGATTAGTAAATCAT
ATCTTGAGCTTACTAGATTTATACTCTTTAAAAATTTATTGCAGAGGCTT
CGTCGGACTTAGTGATTTTGTAAATTTGTTTAAAGCAAATAATTATTCAT
TTTAGGATCATACTGAGTCACACAGCAGGACGTATTTACAGTGCACTTGT
ATCGAAAAAACTTTTTTCTAGAGTTCAACACTCTCAATGTGCTGATGAAA
CAACCATCCATATATTCAGCTGAGACATGCGTAGTATTTGGTATGAACTA
TTTTATTTTCGTCCACCAGGACTTCCTATAGAATACATTTTTGTCAGTGA
TGAATAGTCTTTAATGTATTTCTAAATCATCTTAAACAAATTTGCCTCTT
GCAAATCATTATCTAATGTAATAAAAGTTACCAAACTGTAGGAGATTGAT
TAATCATATTCCCAAACCTCTTCTATTTTTTGTTCAGAGCTTTGTATACG
ATGCCACAGAGGGTAGATATCAATTATTTCATGGCTTTCTTTCAAAATAA
ACTTCTGAAGGAGGTATAAATTAATATAGATATAGATCGATTTAAAGGTA
AAATTTTAATTTTCATCGTTTTTATGGCAAACTCATCTTGTTTCAAAAAT
TGCTTTGAAAAATTGACGTTTTTTTTAGCAGATTTCTTTCAAACAAAGAT
GGTACAGCCATAATAACACCTTCAACTATGAATGCAAAAGGGCATCAACA
GAGTTATCCAACCACGTTTTGGGACCTGCAAATCAAAAACATACAACCAA
AATTATCATGGGAGATTATCGACCACGCCCGCTCGTATTTCAAAGGCTTG
GTAAACTGCAACATCTGTCTCACAGAAAAATTTCACTTAATTACATCAGA
GCTTCATCTCGTAAACAAAAGATCAGAACTTATTTCCACATGTCGCCATA
ACAACAGATTTAATCTGAAGAACTTCAAATCGGTCCCCCCCGGATGAATC
ATGAATTTTATTTTCAATATGTTTTAATAATTGTTTTTATTACAGTTTTA
TTGCACAAATTATCCAGTTTTTCACATTCGAGGAATGCTTGAAAGGGATT
AGTTCGTCAAAAAAAAGGTTGGTATCATAGCTTTGAATGGGCTTTGAATA
GTTTTGATTGTTTTAAGTTGTATATTTATTTTTAGTATATTTGTTTTATA
TCAACAAACATATCAATCAAAAATATACTCAATATGGTTGGTTTGATGGG
TTTGATTCCTACTAGCATGTTCGTCTTCANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNAACCCAACGCTGCCCAAGAGAGCTGGATGAA
TTGACAGATCGCAGTCAAGTATTCAAACCTTCCAATGTCAACAACAGACC
CTGCCACCCTTTCAAAATTATACCAGCTGTACAAAGAACAACAAACACTA
TCTTCAACTTATCAATGATTTTCAGAATCCAGATGGCACATGTATAGTAA
GGATGGACCAGGAAAATCGCAGCATGGACATAAGATGAAAGGTTATGCTG
AACTTGACAACACAGAATTATAAAATTTTGGAAATGCATATTTCTAAATT
TTAATAGTCCCTTTTCTGAAAGTGAAAGAAATGACTTGGGAGGTAATTCT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCAGTCTGGATTAAGAGCACCATGAATGTTTG
TGCAGAGTCAACCCAACGCTGCCCAAGAGAGCTGGATGAATTGACAGATC
GCAGTCAAGTATTCCAATGTCAACAACAGACCCTGCCACCCTTTCAAAAT
CATACCAGCTGTACAAAGAACAACAAACACTATCTTCAACTTATCAATGA
TTTTCAGAATCCAGATGACACATGTAAGGGCAGACCAGGAAAATCGCAGC
ATGGACATAAGATGAAAGGCTATGCTGAACTTGACAACACAGAATTTTAA
AATTTTGGAAATGCATATTTCTAAATTTTAATAGTCCCTATTCTGAAAGT
GAAAGAAATGACTTGGGAGGTAATTTTTTCAAAAAACAAACAATGCATCT
GTCTCCTATTAGGAAAGCATTAGTCAACAAAAAGTGGACAAGCAAATGCC
TGGTAATTTGATGTTGTTTTTGCCTAAAAAACCACATAACAAAAATCATG
GCCTTTGATAAAAGTTACAAAATAGACATACAAATAGCATTTCATATTCT
GACCAAAAGATGTGTTTCACAAAAGTTTCAAAACTTTGATGATGTGAGAA
AAAATGAATAAATCTTTTTTCTGATATCATCGAAGAATCTTGAAAATTCT
ATTCGATAGGCTTCCGTAATCAATGTGGTCTCTCTATCTTAGCATAGGTC
CTTCTCACAATGTCGTCAGTATGTAACTATGCAATTAACATGTAAACCAA
TATTTCCTCTTGTCCATCTGGACAGGAAAATTGTATTAATAACAAGAATT
ATACAACTCTGCTAGCTGTTCTCCTTCTTTCAAGTACCAGAAAGAGGGTT
TTGAAATTCAGCACATACTACAAACATTTTTCTGTCTTATCTATTAGTCA
CATTTCTCCATGAAAAGTTCTGTTCCAAAATACCACGAGATTTCTCAATA
AGTAATGACCACTTCTCTCCACAGTTTCATAGTTTGTTAAACTTTTCGCA
GACCATTCATTCCATAGACTCCAAAAGCAGCCAGCTTCCCCAGTAAATTA
CTTACATCTCTGTAAAACTCTCTGTTAAGTCTGGTTTATTACATCTCTCC
TCGATAACTTCTGTTCCGAAATACCACTGGTTCACACATGTTCAAATCTC
CTTAAAAATTCACTCTCAAAATAACTTAAAATTCCACCACTTTCCAATTA
ATTATTACCGTGCTCTCCAAAGTTCTCTGTTTGTTATAGCTCTCCTAAGA
GATTTCCTTGCCAAAATACTGTTTTTCTAAATGAAATAGTCCCACTTCTC
TCGACACGTGTATGGCTTGCCACATCTAGAAAATTCAGTTTCAAAATACC
ACTGAATTTTCTCAACCACCTCACTCGCGGTTTGCAACACCCCTCTGGGA
AAACTCACTTCAAAGATACCACCAGTCATACCACGCTCTCAGCCTTTCCG
GAGTATGCCTTTCCGAGATGGCCAATCCGTGGAACCCACTTTAAAAATTC
CACGAATTTCAAGTTGACTACTATCACATACTCTCCAAAATTCTCTGTTT
GTTACACCTCTCCTCAAATCAAAGATTTCGTTGCCAAAATACCACTATTT
CTAAATGAAATCTTCCCACTTCTCCCAACAGCTGTATGGCTTGCTGATCC
TAGAAAACTCACTCCCAAAACACCACTAGATCTCTCTCAGCAGGTTCACG
ATTTGTAGCACCCCCTCCGGGAAAACTCAATTCAAAGATACCATCATTCA
TTACCACGCTCTCCGCAGTTTTTTGTTTACCACATCTGTTTGCCACATTC
ACTCCCTCCAAAATACTCTGTTTGTTTCACCTCTCCTCAAAGAATAACGG
TTCTCAACAATTCTCCAAATTGTTAACACTTTGCCAACCTTTCTTAGAAA
ACTAACTTCAAAAATACCACCAGTCCCCTCAGTTAATAACTACCATGCTC
ACCAAATTTTATCGGTTTGCTACACGTCGCCTAGAAAATTCAGTCTCAAA
TACCACTGGGTTTTCTCAGTAAATTACTACCATATACTACAATGTCTCAC
GGTTTGCACAGCCTTTCCAGAGTATGCCTTTCCAGAGTATGCCTTTCCGA
GATGGCATTTCCATGGAACCCACTTTAAAAATTCCACCAATTTCAAGTTA
ACTACTACCACATACTCTCCAAAATTCTCTGTTTGTTACACTTCCTCAAA
GATTTCGTTGCCAAAATACCATTGTATTTCTAAATGAAATATTCCCACTT
CTCCCCACAGTTGTATGGCTTGCCACACCTAGATAATTCAGTTTCAAAAT
ACCACTGGATTTTCTCAATGAATAATGACCACGTTTCAAAGCTTTCACTT
TTTGTAAACCCTCTTCTAGAAAACTCACTTCGAAAATACCACCACAACTA
CCACGCTTTCCAAACTTCTTTGTTTGTCTCCTCAAAACTTCATGCTCTCC
AAAGTTTCACGATTTGTAATCATTCTAGAAACCCCATTTTAAGTACCAAC
ACCAGTTTCCTCAGTTAATCATCACAGATTTACGATTTTATTTGTCACTC
CTTCAAGTTTCAAAATACCACTGGATTTTCTCAATGAACAATTCAGCCAT
ACCACCTAGTAAATTTATGATCATCTCTCTTCAGTGCCACGGTTTGCTAA
TTTCCTCTCAAAGTTTCAGCCATAAGATACCAACTCTTCTCAATATTTTA
AAGTTACACCAGAATCTCAGGTTTCATGGCTCACATTTCAGATCCAAGAA
ATTCCAATTCTCGAAATACCATTAATCTTTCAATGAATTATCACCAAATA
TCTAAACAGTTTCACAGCTCACCACTCGGTACCTCTCTTATTTCTTTATA
AATCTCTAAAGCTTCAAGATTGGCTCACCTCTCCTTTAAAAATCCAGTCT
CCAATAATCAACTTCGCCACACCTCATTTCAGTCTCAAAAAAACACTTCA
ACAACTCTCCAAAAGTCCAGTCTCCAAATACCACTGGTACCGGTACCACC
ATTTTCTCTCTTTCTCTCTCCCACTTTTTCACAGTTTGCAACGCCTCTCC
TCGAGAGATTCGTTCCAGATTTACCGCCAATTATCTCAACGAGTTATAAC
CACTTCGCCACACCTCTCCTCCAAAAAGTTCAGTCCCAATAAACCACTAC
AAATCTCTGTGAATTTCAAATTATTTCAACAGCTCACGGTTTGTCCACCT
CTCCCAGAGAGATTCCAAATTTCCACCAGTTTTTTCAATGAGTTATTACC
ACTTCACCACACCTCTCATCCAAAAATTTCAATCTCAATAAATTTCAGTC
CTCAATAAATCACTGCAAGTCTCAGTGAATTTCACATCTTCTAACAGGTA
AAGGTTTGTCACATCTTTCTTTGAAAAGTTCATCCTAAATTACCATCGAT
TTGGTCACCACACCTCTCCACATCTTTCAACAATTTCAAGCTTTGCAACA
CCTCTCCTCAAAATTTCTTAATNCTTTGCAACACCTCTCCTCAAAAGTTC
ATTTTCAAAATTAATTCAAAATTTCTTAACGTGCTATTACCACACTCATT
CCTAAATTTTAACGTTCTCAGAATAGATTCCAACGCTTATCAAGCAAGAA
ATGGTGAAAAGCAGCCATCCATGGCTCAACCGTCGATTCAGCCAAGAGTA
TAATGCCTGCCAAGACATGATCAACTGGCTAGGAAAGATGAGAAGGAGCT
AAGGACGGATGTTTCGTTGATTACACATCACATCCCTCTGTCAGCATGAA
GGAATTGTCCGACGATGAAACTTTTCTGAAAAACCATTAAATGATCCAGC
ATGGGTAAGCCTTTTGAATTACAACCACTACCACTTAATTAGGCTCTAAA
CCGAAAGTGTTTACTGATGTTTACTTTATTCATTTTCGTTCCTTATTGTA
TACAAGGTCATCATTGACCTAAGTGAACATTTTTCAAGAAAAGCCCTACA
TTGCCAAAACAAAATTTTAGCTAGCTTGCAGGTTATTTTACAGTATTTTA
TCTATATTTTGTTTTGTTGCTGATATCCGGATAAATACATGCAAGGACTT
GAAATTTTGGCTTGTCATGTAAAAACACTTCTTAAAACCCATTCCCACTG
GAAAATTTGGCAAAAAATTGTTCCCTGGTTCGAAAATACCCTGGAATTTT
TTTCTCCACTGGAAAATCAATGTCTAAAGATTACACTCCAAAATTTTTTA
ACTTTGGAACAAGAACAATAAAATTTCTATCCCCGTTAGGATTTCAACGG
GGATTTTTATCTCCTGTGAGACAGGGGTGTTCTTAATCAATGGCTTCTCT
TTTATAGCTTTTTCAGGTGACGCCCTAGAAATGAGGCCATTGTGGTGAAA
TGTGTTAAGAAACACGTCTAAATTGACACCCAATACCAAAAACTTCGAAT
TCGAACAATCCCGAAGATAACAATTGAAGTTAACCTGATCAATCTGATGC
GACCTTCACATTCTAATAAAATTAGAGGTAGGTAAATGACGTGGCTAGTT
CTGGGAAATAATATATTTAGATGGTAAAAATATCATCTGGACTCATTCTG
GACTAATAGAATCTCTTTGTGGCAAACACACTCTCCTTGTTACCCATTAA
ATGCTGGTGATCCCCTGAAAAGGCACGACAAGAAAACAACGTTTTAAATT
CTGCTTCACTTTTTTCGGGACACAATGCTTTGATATTTATACTTTTGAAT
TATATCATTTAAGGTTATCACTCTGCATCTAGAATTTAATCATACGCCAA
ATGAACTGTTCAACCTTGAGCTTTGGAAGGCTTTTTACGGAATCTCATGA
ATTTATTTTCTTCCAGGAATCTGCTCAATCAAGGAACTTGGTTCAATCAG
GCTATCACAGCGCCACAGCAATTTATTTTTTATGAATGTCTTCATGTGTG
ATCTCGTTTTATCTCAGAAAAATCACATATCGAAATTTGCAAGGCATGAT
GACCACCCAGTTCGAAGTAATGTGTGACATTTGCATTTGGTACAGAGGTG
AGATTAATATTTTACAATATATCTGATATAGAAATTGATCACTCCATTTT
ATTTTAGGGTGTACTTCAAGATGAATTTTTAGGGGTATAAGAAAGTTTAA
CTATTTGTCCATTGGTTTGGGTCGTTCTTTTTCAAAAGGGGTTCGTTTTG
CGATAAAACATCGCCTATGTTTACCCGAGAGTTCTAAAGGAAAATATTTT
GAATATCTATTGGGTTAAAAGTTATTCTGAAATTTCCGAAGAATTAGAAT
ACTAATTTTGGTCCATCAATCCCACATTTTGTTTATTTTTGCAAATTATG
CCATTTACCAGAGGGTACCCGCAAATTTCAATACATATTTTGGCTTGAAA
AGGTCTGTCAAGAGAAACAGACCTTTCAAGCCGAAAGAGTCTTTCAGGCC
AAAAGATTTAGTGAAATTGTGTGTGTACCCCTTGCATGAACATTAAATTC
AAGACAAAGAGGCGCTTTTTCAATCTATAAAAGTACAATGCAAATTATAT
TAGTAGTATGACTTGGTTTCCCCCAGTGGAAAAATACTCTGGAATTTCAA
ACACACTGGGAAATTTAGTTTGATTTTATCCCATTCGAAATTCAATGTTT
AAAAATGGCACTCCAAAACCATCTCCACTGGATTTTTTAACCTTAGATCA
ATAGAATTTCTATCCCCATCGGAATTTCAATAGAAGTTTTTATCCCAGCA
CCGAGGAAAAAAGTTCCACCGGGGCTGTGAGACAGGGGTGTAAAGCTCCA
TCATGTTAGGTTTTTAAAAGGGATCATTATTGTACACGTTTTTTTTTTAA
GAAACACAGTTTTAAGAAACATGAGGCTCAGAATGCCTAAAAACTAAGAA
ACATCTAAGAAACATTTTTTAAGAACCTTCCAATCCAGCCTTCCATGAAT
GAGGCTGATTATGTCAAAAAGTTTAGAAACATGTAAGAAACATTTGAGGC
TCAAAAGGCCGATTTCTTAAGAAACATTTAGGCTGTTTGGTAGAACTAGT
TTCTTAAAAAAAAAACGTGTATCAGCAGTTGATCAGACAGATAGTTGATC
TATTCAAGGAAGTCTTGAAGCTTAGAAATTCAATCAAAAGGTCCAATATT
CGGAAAGAGCCTCGTTCTCAATTATCAATTATCTGTATAGTGATTAAGAA
TTTCTTGTTTTATTGTTGAATTATTGTTTTGTTTTCAGGAAAGCACCTAG
CTTCGAACTTCAAAGATTGCCACCAGTTCGCGTAGAATTTCCAATGGATT
TTGTACAACATAATCGAATGTTGGTATTTCTTATTCAAGAATGAAGTTAA
CTACTACAAAGCAGAGTACAGATTGTTAAATTCAAAAAAATATTTTGAAA
TAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036541TCONS_00036541Clytia hemisphaericatranscript
TCONS_00036540TCONS_00036540Clytia hemisphaericatranscript
TCONS_00036539TCONS_00036539Clytia hemisphaericatranscript
TCONS_00036538TCONS_00036538Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036539-proteinTCONS_00036539-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001478supercontigsc0001478:18179..28231 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.53	4.04	0.64	0.07	1.58	0.89	1.95	1.61	2.15	2.9	2.85	2.38	1.19	1.66	1.12	2.29	1.61	2.34	1.82	1.97	1.87	2	3.47	4.07	1.4	1	25.22	16.55	2.22	1.39