XLOC_021374 (gene) - C. hemisphaerica

Overview


Name	XLOC_021374
Unique Name	XLOC_021374
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0001442:49646..58183+

gene from alignment at sc0001442:49646..58183+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_021374 ID=XLOC_021374|Name=XLOC_021374|organism=Clytia hemisphaerica|type=gene|length=8538bp|location=Sequence derived from alignment at sc0001442:49646..58183+ (Clytia hemisphaerica)
AtttgtattattttttcaatggtTTTGCAAGATTATTTTAGTCTTTGTTA
TTTAGAGCTCTTACTAGAAAGCCTTCATGATAAATAATGATCTTCtggca
ttgatatcatgaattatcatgattttttttccttttctttccttgacatt
tattgttttgttgtcctccaagcttttattttttgtttgtacttccATAA
CGATTCAAGCGTTCGGATTGGTTCAGAACGAAAACAATCGATCGGACGCA
GATATTTCAATAGAAAGAAAAGATTCTACAGCTTATTCTTCAATAGATGG
ATAGCacatttcttatcctctttttccaaaattggtATAAATACACTGAA
ATTTAACTGGATTAATCAATCCAGACTTCACTCTAGATTGCTGAAGAAGT
TGTTCTTTCACCAACTGAAAGTCCATTGATAAGGTAAGACATTtcattta
ttaattttcttaGCAAATCTTCCAATTTTCCAAGCCATAGGTAATCCATA
GATGTCCATTCGTTTCGTTTGATACTCCTAAtaatagagtcgatatttta
cgtggatagcccagcaatctaggacttttagacagtctttcgattgtttt
cacggggtccacctCCAGCCGTTCTATGGTAACTGGAAATGAGAGATAAA
TTCAGACGTAGAATATCATCAAGCTGGTTGTCGCACTATCATTCGAACTT
AAGATTGGTTTAGATTCAATTGATTCTTAAgtcagtgttttttacacttt
tgggaaaaacgtgaaaatttgggCACTTTTTTAAAACCAAATTTTAGAGA
GCAAGTTTTCGTTCATTATCAAATTTAGTGGTTCTATTGGAGAGAGAAAA
GATTAAAGATTCCATTCCTTTTTAAATGAACAATATAGCGTTATTGTACT
AAAAGTAACGATCTTTCAAAGTTTGGAGCAGTTAATCATAAATTTATTCC
ATTGGGAAATGGAAGAAATATTCCATCGGCAATAGCTCATTGAGTTTTTA
AGCTTTTGGGCTAAAATTTGGCAGGCAGAAGCCTTTAAGCGTTCCAATCC
GTAAAAGGAAGAATTATTCCATTTAGAGCAATTCTGGAGGAGTTATTCCA
CTTTTTCGTTCGTTGGATAAATCATTAActtcattcaaaatttcattggg
TAGTATTTGAGAAATCATGTTCAAGCAAGCATTTGTTCAATCTCAAGCAT
CCCTAGAATTGAAAagttaacatttttttggaaatggagCATGCANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgataaaaccttaaaaatt
tatgtttagCTTTAACTGACTTTTGTGACGGAATAAGCAATAAAAAAGTG
CTCTTCGCTTgtgtttttcgaaattcagggATGAAAAGGTGTAAGGAAAT
CGTATTTAGAACTTTGAAATTTGTATATAACaatttcaaatgagaaaaac
acaaaatctatttttttggaatatctcatCAAGTATTGCTCGAGGAAAAA
ACTTCAACAGATTTGAAATTATAATTCGCAACTTATTGGAAGTTTTCATC
CCAAAATAATCAAGAATCGTGATTTTAGACTGAAAAAACCGTTTNGTCTC
ATCAAGTATTGCTCgaggaaaaaatttcaacagaTTTGAAATTATAATTC
GCAACTTATTGGAAGTTTTCATCCCAAAATAATCAAGAATCGTGATTTTA
GACTGAAAAAAccgtttttgacgaaaattagttttcacgtttttgccaaa
agtgtaaaaaacactgacTTAACGTATTGATGACATCTTACTTTTCGCGC
AATCATTCGGAGTCAAATTAAAAATAGATCCTAAATTCACTTACATCAAG
CTGTAGACATTGAAATCCTCGTATTTCGCGTCCCAATTAGTCCAAATCCA
CTTATAAATTATATGTGATCTGAAAATAAGATACTaacccagacggcaca
caacgtcaaaacaatgcccatgtgacattcataacgtccaaataacgtta
tctgaacgttaaaacaacgtagtgtgccagctgggagtcGTAAAAATAAT
TAGCAAAGTACGGAAGCATATAAATTTCGATACTCTACTTTCAATTCGTA
AGTTTTCTCTTGGATCTTCTAGATTTCAGAGAGAAAAATGGCAACTTTTC
ATCAAGCAGTTGTGCTTCTGCTGGTAGCAGTAATATCAGTCCAATGCAAG
ATTTATTTGGTCCACAAATCCTCTAAGACTGGCAAATGTGGCTACAATGG
TTATGTTCCAGGAGGTCATGGACCATCTATCAAGCGAATCACATCCCCAG
AAGCGAAGTTACAAGAAGAGCAAATGTCAATGCTTGCTTTCAAAGATCCT
ACCGTAAATAAAGTCAAGAGTGTATCCAGGAAATATTATGACCAGTTGGT
CACAGTTTTTGGTGATGTGTGTCCACAAATTGGAATCGGTCTCGGTGTTT
TTGGTCTTGCAACCATGATTGAAGGAGATATTTCAGGTTCAGCACCACCT
ACTCATGCTGATGTCATCAAATCTGTCAATACAGCATTTGAAAAGTTAAC
TAAAGATGTTAATGCCCGTTTTGATCGTATGCAACATTACGTTAATCATC
AAATCATGAAATCTGAACGAGATTTAGTGAATGTCAAACTGAGGTCCATT
TTCAAATCTTGGGAAGATTGCATTGATGAGAAAACAAAGAATGGAGCGAT
CATGTGTCAAAAAAATGCTGTCCGAAAAATGAGAGGTATGTTTCATTTAA
TactttcaagaaaattttcattatctAAATTACGTTGGCCCTGAGATGTC
ACTGTTTCGTCACAAAATTTCAGTGTTTTATCACAACTTTCCAGGACACT
TTTCAGTGTTTCATCACGGAATGTTTGTGATAAAACACTGAAATTTTGTG
ACGAAACAGTGACATCTCAGGGCCATCGTACTAAATTCATTTCTCAGCAA
GTTCCTTCACTCGTTCTTTGATATGGATCAGAGAGAATTTATaagacatc
cctgtctcacagccccggtgaaactttttcctacagcggggataaaaatt
gtgATTGAAATCttaatggggataaaaattttattgttccaaggtaaaaa
aatccagtggggatggttttggagtgcaatttttaaacattgaatttcga
atggggacgaaatcaaagtcaatttctcattggggctgaaattctagggt
atttttcccactgggacaaaatttttgcaaaaattttcagtggggctggg
gccccagtgggtctgtgacacagaggtGTTATAAGTATGAGGGTGCCTAT
CGCCTTTTGAAAACGGTGGTTAGCTCCGGGGCAGAGTAAGCACTGACGGA
GGTGTTTAAAGTGTAACcgtttgttccaaactctaccgccacagACAGCT
TGTATAGTTTTTGTATCGAAATGACATAATATGTTCGCAAGCCAAGCTGT
CAAAGGAGGGCGTTATTAACTGCCAATAccacaatttcatttcataggtG
AAAGACCATTCTTTTACCCTGGTTTCGATAAGAGAAAAACTTGGTCTCTA
AGCAACCGACCACctgttgatgacgtcatcaaaatggaagccaattttat
tttatttcgtgATTATGCTTTGATTAATATCATGATGGTTCAAACTTTGG
TCAATATTTATCGAGAAGACAAGAAATTGCCGAATGCAAACATTTTGAGA
GATCAATATATCAATCAGGTAAAGTTTTATAcaatgttcaatttttttat
aaaaacatccaacatttttaaagctttaatgtgttctttactttttgagt
tttaaatgttctttaaattaatttccattttttgtgtgtgtttttgtgca
attttctgAGAATTGGGAGTTTAGAGTCAATAAAGgcattcaaattttct
taactttatctttatatatgttcttatatagtttgttcttataaaaaaat
atgtattctcaaattttcattaTGCAAATCTTACCAGTATGAATCTTTCA
TGGTTGTTTATTTTCACCCGGTATAATAGAGATCTATGAacacacgtttt
ttcataagaacatccaaaaaattttaaatctttagatattcttaactttt
ttagttttaagcctaaaaatgttcttaacatgttcttattttcaccatta
tttgagcatttttgtccattttcctaagaaattgggtactttagagtccc
caaagccttaaaatgttcttaacttgttcttaacatttttgccatcgaaa
tcttatgttcttatatggtttgttcttataaaaaaacgtgtattacattt
tccccatttttttcttcttcagctAAGCGAAGATGCAAATGATGCAATCG
AATACGcagaatttgtttttaaatggcTTAAAGATTTGTATGATGAACGA
AGCAAAAATTATTGTAAAGACAGTTTAACATGCAAACGAAAACAAGAGGG
TGATATTTTAAGAGGTAATCTTACGTTCTTTGTGTAAACAGTATCCAAAC
TAAATTTTAGGAGGCTCATCTTTTAcatccctttctcacagacccggccc
aattttttcagccagtggggattgatattccataTTTTTTGTGGCTGGGG
ATttcatttccattgttttcgagccaaaaaattcagttgggattgaaaaa
aatagcacaatattttgcaatgaTGATTTGTTTATCTGGTTATTTTCAac
agggacaaaaattagagcaTAGTTTTCCACTTAGATACGATATTTTGGCA
AACCTTTCCAATGGGAAGGGATTTCTGTGAGAAGGAAAATGAGATAAAAC
ATTAATTTAGCAGGAAGAGATAAATTGATTGGAGGAAAGATGGAATTTCA
AATTCCAATGGACGGGATTGGAGAGGGGGGTAAGTAATAAGGTTAAGGAT
gagaatgaaaacaaaaccatCATTGGAAAGCTAGGTACTTTTATTGAAAA
CCCTATAGCAGGGTAAATACGATAAGTCAATATCAGGTGTTTTGGGGCAA
TAAGCAGGAGGaggaaattcttttttcacaCGTGGTCTCAATAAGGTCAA
ATAATTAACCAAGCGGGGTGTTTAAATGGGCAGAAAGAAACGAAAGTTGA
CAAGGGCTGTTAACCAAATTACGCAATTAGTATAAAAAACTAATATTTAA
ATTGCTTTAAATTCATTTAGGTGATTGTGCATGTATTTTTGCGGCTAATT
TAAAAGAAGAATGTCACACgcaaattcaaatcaaaacaaaaggtgGACAA
GTGGCACCATTTGCAAGGAAAGACATACCAGATTGGGTCAAATCGAATGA
CAAAGCGATGACTTACGTTGCTGAGATGTTTCTTAACGACGGATGTAAGT
GATTGTGTACAATTCTTGCAGGCAGTTGGGGGGATATTGCTCATATCACC
GAGATTTTCCATTGCTAAAGCACTTATGCAAAatgagtacacgttttttc
ttttgataagaacatccaaaatttgtgaagccttcggatgttcttaattt
tttcagatttaatgagcctaaaaatgttcttaaacatgttcttatttttg
ccattttgtgggtatttttgtgCGTTTCCCTAAGAAATCGGTTTTTctta
gagtccccaaagccttaaaatgttcttaaaatgctcttaaaatttcgacc
atcgaagtcttatgttcttatacagtttgttcttataaaaaaacgtgtat
ataagATGATACATTTTTTACATCTCAATTATCTCTCCAAGGTTTATTTA
AACAAATGCACTCTCTCAAAAGGGTCTCAAAATAGGTCATGCAACATCTT
TCTCACAAGGGTTGATTTCAAACCTTTGACGATTCTAGATTCTGCAGAGG
GAACCCTTCGCTCATAAAATCGCTCTTGCTTTTCTTCATTCTAGCCGCCT
ACCATGATAATTACAAtgcaaaattatatcgagttttATTGCGAAGAGAT
ATGGAAAAGTATTGGCAAAACGAAATCTTGGATTTGATTCCAACATGGAG
AAACATTGCGAATAAAGGGAAACAAAAGACTGGTATTAGCACAACATCGA
CTTCTGGAGGAAGTGTGAATGTGAATGTTGGATCTGCAGTTCGAGGAGCT
CTTAGCAGGTTTGGTAGACGAGATATGATCCCCAATTACTGATCAGTGAA
GCTAAGGATACAAGAAGCCGAAAATTTaatgatttcattgaaaaattctA
ATTGAAATGATAACATTGAAATTTACGATAACATTTTACGTAATAATAAG
TAACTATAATTAAAAGATGAATGTCATGGTCAATTGGCTCCTGCTTATTG
CTCCAAACATACTTCTAAGGGGGCTTTCTAGTCCATCGTTTATAATCTGT
TTTATAAGATACTAAAATATCTTCTtagttctttctttcttttgaaatta
gctCTAACTTTGTAACCTGTTTTATTTTTGACCCATCTTCTTTTAGTTGA
AATAAAGTAAATTTGTGCTTTAAAAAAGTATTGTTTTTGCTTCGAAAGTT
ATATCCATTAAAGACTTCAGTCAGAGAGATGATAAGATAATTATTGGCCT
TGACTCTCCAATCACTCGCTGTGAAAATTCAAGGGACATAAAAATACTGA
CGaactttgtaaacaaaccgtatgcagcgggatacaaaatcaaaacaaat
gtcacatgtcaaaataaaaattaaaaacaaatgtggctgattttgattgt
gtcaattattttacaattttgttttggacacgtgattttaattgttctct
ttaatgacacgtggtttgcgcaatgtttacattttactacttttatgtcc
ctttaagagaATAACAGAAGGGCGTGCATATTTTGATATTGGAAAATCTT
Gaagagaataaaaaaaatcttgaaaatgcttataataaaaaaatattttt
gatgtacTATAGAAAGGCTAAATTTCCGATCACCATTGTAAAACAAGAGA
CCTAAAGTAAGTAGGAGACGCTGTCTTCAATGTCTTCAATGCGAAAGTTT
GACCATTTTAGGTACAATACCCAGGCCAATTgtgtttcaaataaaagaaa
gaagaattGTTTTTTCTCACGAGGAACCAAAAAGATGCCTTCTATGGTGC
TTAAGTAAGTAAAAGAAAGATTAAAAAACAACTACCataattaaaaataa
gttatttaaaaacaattaaCAATTTAATAAAAAGACTAATAATATTTGCC
TAGCACTAATTTGTAGTTATTAACTTTGTAGGGGAAACCTTCTTAAGTAA
AAAGCGTCgaaatttcaaggaaaatgacaaaattttcc

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00036316	TCONS_00036316	Clytia hemisphaerica	transcript
TCONS_00036317	TCONS_00036317	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00036316-protein	TCONS_00036316-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0001442	supercontig	sc0001442:49646..58183 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.2	2.36	2.28	2.15	1.53	1.05	5.68	6.74	95.5	25.92	45.88	76.96	10.78	9.4	79.66	82.29	4.29	5.63	11.08	7.42	1.88	2.17	4.66	4.31	3.56	4.73	3.24	3.13	20.41	15.2

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XLOC_021374 (gene) - C. hemisphaerica