XLOC_021325 (gene) - C. hemisphaerica

Overview
NameXLOC_021325
Unique NameXLOC_021325
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001432:26973..35574-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021325 ID=XLOC_021325|Name=XLOC_021325|organism=Clytia hemisphaerica|type=gene|length=8602bp|location=Sequence derived from alignment at sc0001432:26973..35574- (Clytia hemisphaerica)
AATACACTCTTCTCGAGATGCATAAATTCATTGTTGTCCTCGTTTTCAAA CAGATTTCATTGCTGTAAAATCACATATTCACAATGATAATTGTGTTGTT TACACCTCATGAGACATTTTGAATTTCAAGTACTTTTGTATTAGAGTTAA TGTTTGCCTTTTGGGAATTTAAATTGGTTTAAATGTATAATTTCATAGCA ATGAAATCTGTTTGAAAACGAGGACAACAATAAATTTATGCATCTCGAGA AGAGTGTATTTTGTGTGCTAAAATGTAATTCGTAACTCGCAACTCGCGAT TTTATTTTGTTAAAATGCAACTCGTAACTCGTAACTTGTAAAAAGTAACT CGCAACTCGTGGTTCTAAATGCAACTCGTAACTCGTAACTTGTAACTCGT AACTCGCATATGAAAAATCCTCTGAAAATCAGACTTGAATGGATTAAGGA ATTCTTATCTATTCCTCTGTACACATAAAAAGGGGGAAAATAATGATTGG AAACAAAATATGTGGAGCTTATGAAACATCTCTTTTTGTCTGCTGAGGTT AGGTGAAAATTGCTAGTACAAGAAGAACAAATATATATTAGTTACATCAA ATAGAATAATTAAATTCTTTTCGTCAGTTGGAAATCAATATTTTGCATCG TAGTGTGTACTGAGAGGTGTCGTTAGATGGATCAGCTTTTAATTAAATTA TATAATTATACGATAAAGCTTAAGAGACTCCTGAGCTAATGAGCCTCTTC CCTGGACTAAAAACGCTGTCTCCCTCGAGCTAATAGGGGTCGGTTCTCTG TGCCAATCTGACCGATCTTTTGACAGGACAAAAAACCATGGGTCGTTAAG TAAAATATAAATCAAAAATGAAGCTGCCATGTTCAGTTCTGTATTGCCTC TCGAATCATCTTTTCCGGCACTGTATCGCTAATTCGCAAATTTTCATGGA AGTTTTTAGTCCTGCGTGTGACTGACTGATAGTTACCGAATAAATGTCTG TCATAAAATTGTTCAATATATGAAAATTGTCTCATCAGGTAAGTCTATAG GTTAATCGTGTGATCGAATTCCGCGTACGTTCGTTTATGATTGATCGACA ATTCTGTGTGCGTTCGTTTATGATTGATCGACAATTCCGTGTGTATTTGC GTATGTACATGTACGTTAATACAATTGTTCCGCATCAATGACATGAAAGA AATAGAAACAAAGAAAAGATTAGGTTAAGTATCCTAACCTGTTTGTTGAC AAGAGAGAGGAACAGCTAGCTACGAGCTACCATTTTTGTACGCTTCTGAA CCCGTCATGCATTGCGCAACAAACTGCCGGAGCCGAAAAGAATCTACTTT TCCGGCTATTTTTCAAACCGCCGGAAATTCCGCTTCTTATCTATTCCTCT GTACACATAAAAAGGGGGAAAATAATGATTGGAAACAAAATATGTGGAGC TTATGAAACATCTCTTTTTGTCTGCTGAGGTAACAAAAAAAGTAAAGCAG GAACCAAAGACAAACACGAAATCGAAACGAAATACAGTAAACCAAAATCC TTGGTGTTTATAGTCCCAACTTTCTAGAGACAGAGAATCGCTTTGTGTGA CTGTCCTTGATGTATCTGTCTCGACTATTGCCGAGGGACCATCGACCATG TTTGGAAATCATTCTATCGGATACTCCAGCGTTTGCGGCAGAAGAAGCGC CGCCTGCCCTCAAGGAATGCGTCCCTATCGTTTTTGGGTCAATGTTTTCT GGAAGATGGATTCTGATGTTTTCGAGAGCACTTGAGTAACTTATGCTGTA CTTCCCCAAGGCTTTATGGCCTATCTTGCACTTGGCGAGCCTGCAAATTA CAAAATCCTCTTTTGTTATGTTCGCCAAAGCTATGTACTTCTTTGTCCAA GCGACCGGACAGGCAATCGACTTTGTTTCGCTAATGAATATGGTTTCCCC TTCCCTAAGCTGATCAGTTTTGGACATCTCTAGGAAGATCTTCATGCCCT CTTGGGTGAAAGAAAGATGCTTGAGCTGCAGGGGTAACAATTCTTTGATC CTCATGAATCCCGAAAAACCCAACAAAAACATTACTACGGCTCTGACTTC TAAGAGGTTGTGAGATTGTGAATACTTCGTGGCAATGGCTATTAAGGTTT CGTTCTCTAAAATGTCTTTGCGATTCTTGACAGTAAAAGGGGCAAGAGTT CTTTTCGCGCCTTCCAAAGCTAGTTGAACAAAAGGGTGGTCAGTAGGAGG GATGAGCCCAGACTTGATGTGACCCCAACGGATTGCTAAAAAAGCTGATG TTACTGCGCCTACTTTCTCTCTGCGAATAGTTAAATGATTTAAATATAAA GCAACATGAAGGGGGTCGGCTGGACAAGCGTTAATCTCCTGAAAACTGTT TGTGAAATTGATCCATTTGTTCCAAGCTGGCTTATATTTCTTCAGTGTCG ACTTAGCATAGGCATTCTCAATCAGATCAGGTAGTGTAGAAGCTAGGTTC CTTAGTTCAGGGTCTGTGAAATCACTCGAGGTTACTCCAAAGATGCTATT GTCAACAGCTCCTAAATGGAAAAAATAAATAAAAAGATTTTGAATACCTG AAAGTGAACGTGATTTGTGATCCAGAATTCGAACCAACGAGGGATGAGCA AATAATCATGTCGTTAATGAGACCAACGAGGGTGTACCAACAAGGGTAGA GCGTCTTGCAACCAGGCAAGGATAATCGTGTACCAACGAGGGTGTACCAA CGAGGGTGTACCAACAAGGGTAGAGTATTTTGCAACTAGGCAAGGATACT CTGTCCAATTACATCTTCGCCATTCGAATGTATTGTAATCATTTTTCCAT TTATGTAATGTTCACATGAAAGAAAGAATAGAAAAACATTATAGTGTGTC AGTTTGAGATAATGTAAAATGAGGTTGAACACTAATAGGTTTCAAAACTA CGCACTGGAATAGGTACAGGCAAATTAGAGTGATGTAAAGTGAACCTTGG TGAGAAATATTGAGACAGATCAACATACTGTTGTTTTTTCTTATATGTTT AAAATGTTTACAAGACTAGTCAGTTACAAGTAACAATAAACAATAAATAG TGAAAGGTTGTTATGGGGTTTCCCCGGAGAAGTCTATCAGTAATGCAAGA GAATGAAATTTGGCGAAACCGTCAAACACAGAATCAGATAGTCTGGCAAA ATTCCAGAAGTAAGGATCTAAAACGAGATAGTGTTTTATAAAAGTCTTGA AATATCTGCCATCACTTGTCAGGAGTGGCCAAAAATATGATGACTGCCAC ATGGGAACGAAAAGCACTCCTTTTCCTCTGCACATTTTTAGGAATCTGAT AGATCTACCGATAAGTCGGATTGGTGGGCACAACCAGTTGAAATCGTCTT TCCAAGTGATAGAAAAAGCATTGACCTGATTTGATCCGGGGCAATGGTAT TTTGAGTTGAAGTTGCTCACTTTCCTATTGATGTTATCAGCAAATCTGTC CACAGTGAAGGGACCATAAACCGATTGGATGTATTCAAATGTCTCATCAT CAATACTCCAGTTGTCTGTGTCTTTTTCTTTTGAGATGGCGTCGGCGATC TTGTTTTCTTCTCGTGGTACCCAAATAGGGTAGAGAATAATGTTGTTCCT GATACACAAGTTGTAGATGGCAAGGGCTAATTCTTGAAGATGATGTCGTC TGGATCCTGTTGATATTATTCTGGGAACGTTGTTATTATCTGTGAGCCAC TGCACGCATTGAGATTGGAGATGGTGAGCAAATGACTGAAGAACATACTT GACTGCTAACAACTCTCTGCTGGTAGAGCTTGTTTCTACTTCATGGTCGT GGAAGTCACCTCTTGCTATGACTTGGCCTAATTCTTGAATCAGGAATCCT CCATAGCTGCTGTTGCTGGCGTCAGAATACACAATTTTTGTTACCTGAGG TGTGTATCTCATTTTTAGACCATTCGAGTCTTCAAGGTTAGACAGCCAGA ATTTCAATTCATTGATGAGCTCAAAAGATAGGATTTTTGGAGTGTCCCAT GAATACCTGGACTCAATGAAAATGTGCATCTGTTTTGTGAAGAGTCTAGT CAGGGGGCCAATGGCTAAAGACATTGATGCTATGTGGCCTGCAATCCTTG ATATAGCCCTTGGTGTTGCATGGGAGTGTTGTAGAACATGATTGATGTTG AGTAACAGCTTACTTACTTTTTCTTGAGGAACTCGAAACATCATGTTGTT GGTGTCTATAATGAAGCCAATCCAAATGCCTTCACGAGTAGGCGTTAGTT GAGATTTTTTTGAGGTTGATTGTTAATCCTGCTTCTGACAAGTCTCTTGT AATGGCGTTGCAAAGGATAACTGTTTCATCGAAGGAAGACCCTCCACAGA TGCCGTCATCAAGATACATGGCACATTTTTTCCCTTCTGAACGCCACTTC TTGATTAGTTGTTTCATCAACTTTGTGAAAATGAAACAAGCACTGCTGAG CCCAAAGGGGAGGACAGAGAACTGGAAAAATTTCATCTGACCTTCAATGA TCCATGAGAAACCTAAGTATTTTTTGAAGTCTGCATGTATTGGGACGTGA TGATAACCACTTTTTAAGTCAAAAGTTATGAAAAAATCTTTTTCCTCTAA AAACTCTGCTACAGTGCTAAGATTGTCATATTTAAACTTGTTCAAATCGA TGAACCGATTTACGTGTCTGAGATCAATGCAAAGCCTTAGTTTTGGTTTT TCTGCTACTGTTAGTGGATTCACACAGAAAGGGACTGACTGGGTTTCCTC AATGCAATTGTTCTTGAGCAGTTCTGCAATGCTGGTTGTCACAAAGTCAT CATGTACGAGGCTCGATCTGTTGTTAGGAGCATAGAATCGAGGGGGGTAG GCTTTAAAAGGAAGTTTGTAACCATTTGTCACTATGTCTACAACATGAGG CGGGGACTTAAGATCATGTTTCCAAAAATCTGCATGGTGTCTAATCCCAC CGGCTGCAAAGGCTTGTTGGCCTTCTTGGGACTCCCAGTCTCTGAGATTG TATCCTGAACAAATGAAAGTAAACAAGAACAAAGCTAGCTCTAAAACTGA GAATATGTGGCTGCACTCCGGGGAAAACCCCCTGAGGTGTTCAAAAACAA ATCAATTTCTCGTATATGGAAAAAATAACACAAAAACAATAAAAACAAAA TTCAAAATCCTTTGGCTTAAGCTTCAACTCAAATTATGTCTATGTTACTA TGACAAAATGTAAACACGAAAAGGTTACTGTAAAAGTTAGTAAGATAGAA TAATTGTCCTTTCATTATTTTCCTGTTTCTTTTGCGCCAGATGCTTTCTT ATTGTCTAATTGAAGTTGGGGTATTTTTGGGAGCTCCTTGGTGGTAAATT CTCTCTCAAAGGGGCAATGTTGAATGTAATGACCAGTGATCTTGCAATTG TAGCAAACAATGTCGTCCATTTTGTTTTTGAAGGTCTTTGTGCCATCATA GGTCTTAGGTCTATGTGTCGACGAGGTAGAATACGAAGATGAAGGAGAGT CTCCTTTTGAATCAAATTTTGATTTCTTGAGTTTATCTCTGATGGTGGAG GCAGCTTTGATGGCCTTTTTTAACTTTTTCTCCTCCTCGTCATCAGAGGC TAGTTCATCTGATTTAAACTGTTGTACGGTCAACCACCCATCTCGGTCCG CAATACAAATACATTTAATCCTGTCTTTAATTAACTTCTTACCTTGATTG AGGCTGTCTCGTGCTGCTGGAATGTTGTTGTTTTGGAGGTGGTGTAAGGA ATCGTCAATTAAGTCTTCTATTTGTGTTTCATGAAGGAATTGGTCTTTAT GTCCTTTTTTATTAAAAGACATTTGATCAGCTTTCCTTTTCTTCGAGAGC TTCTCTGTTGTTCTTTGCAGTTTAGTTTCTGTCTCTTGCAGAGTGGACTT GAGGCCACTCATCTCATTCTTTAGAGTGTTTGTTATGTCAGTCTTGACTT TGTTCAAAAGATTTGTCACTTGTCTTTCATCCATGCTGTATGTTGTGATT TGAATTTCTCAGGTTATAAAAGCTGTGGTTAAGTATCCTAACCTGTTTGT TGACAAGAGAGAGGAACAGCTAGCTACGAGCTACCATTTTTGTACGCTTC TGAACCCGTCATGCATTGCGCAACAAACTGCCGGAGCCGAAAAGAATCTA CTTTTCCGGCTATTTTTCAAACCGCCGGAAATTCCGCATATGATCAAGCT AGCTTCTACTTCTACAAGGCTGGATATATCTTAATTGCAAGTAATCCTTT TAAATGTTCAATTAAAAGTCTCCAGAAGTGAGGAATAAAAATAACTATTA AAAATGATTGAAAAAGCTGAAGAGAATTTTCTTCTCTATTTTTTCTTCTT CTTGGATTACACGTTGTTTTTTTTTATAAGGAGCCTTAACTTTGCTCTGA GCCTGGAGCTCCTTATTTTTACCGAGAATTTCAGCCTCAAAGTTCCTTAT CGAGTTCCTTATTTACATAGCTGCTAAGTTTGGATAACCATCTCTTACTG TTCCTTAAAACTTATTTTCTTATTCTCAGCCCGAGCAGTTCCTTAACAAT TCCTTATTTTTTGGACCATTTTCAGCCTCGAGTTCCTTATAAACGTCTTC CTTATATAAAAAAAACGTGTAACTCGTGGATATTACATGGGAATGCCAAT AGATTATTGCACTTTTTCCTCAATTAGATGAAGACTTTTTTAATAATAAG AACAAGAAAGCCTAAGCGGTGTAAAGGCCCAGCAAGGTTGGCACTGTCAA CATATTTTTCCGTTGCAGAATTACCATACAACAGGAGCAAATTTTACGCT AAAACGCGTGTGTTTACAACGTTCTGTAAACAGTTTTCGAAAATCTAACA AAGCTCTACAAAGCCTCCCCTTCACAGCGTTGAACCATCGTCTTTTTGCA CCTCATGCAGATCTCCTACCATTAGACGAGCTTTGAGACGCCAAGTCACT ATTTCTATACAGGAACATTTGAGCTGGATGGGTTAAAATTAACCTTCTTC CCAAATATAATTTTTGCTTTCGAAGAATTCTTATTATAACTTTCAAAACA TATATTATACTTTGTTCTGGTTTGAACTCTGATCTTTATGAAGAATGTAC ATTCTTTTGAACCAGCAAGCCAACTGTGGCATGCGTAAATTTAGTTTTTT TATTCAAGGTTATGGCAAGAGGGCCTTTTAAACTTTCACTTTAAAATTGT CTCTCTAATCTATATCAATACGCTAAAACGTTCTGTAAACCGTTTTCGAA AATCTAACAAAGCTCTACAAAGCCTCCTCTTGACGGCGTTGAACGTTGAA CGTCTTTTTTGCACCTCATGCAGATTTTCTACTCCTAGAAAATTTCTTAC CACTAGACTTTCAATCCATAGCCCAATTTCCCTAAAGTTGTCTTATTAAT GTGAAAAAGCATATTTGGGGGATAATTGTTTAGTAATGCATTACATTGTA CGGCGTTTTGGTATCCTCCAAATACTAGAATATAAAAAACGAAAGCTGAA TATGGTTTGTTGAACTATTTTTGAACAAGTTGGACGTCTAGGTCTGTATT TTTTAATTTTCGTTTTTCGACGTCAGTTTTATCATTTTGTTATGTTTTTG ATTATACATAGCGAGCACCTCACTAAAAACCGGGATTTTTCATCACGTTT CTTAGCGAGTTCCACTTTGACGATTTTCGAAAAATAGAAGCCTTTCCAGT GTTTTGACGCAATTTCGATTGTTTTGCTACTGCATGAGCTTCGAAAATTA AAAGTGACGTCAAAAAATCGAATGTTTAGAGCCCGGAAACCCGGGCTCAA AACATTCGAAAAAGTCGCAAAGTGGAATAGACGTTAATGGCGTAAAAAAA ACGCAGGTGACGTCTAGTATAAGCTANATTTTTTACTTTTCGTTTTTCGA CGTCAGTTTTATCATTTTGTTATGTTTTTGATTATACATGGTTGTCTTTA AAATTGAATATCTTGAGTTTCATTTAAGTTTTTGAAACAAAACTTTCAAC GTTTACTTATATGCTAAGGATCAATTCAATGGAAAAATACGTCAAAAAAT TTAGTTTAAAACATGTCTTTTTGAAAACGTTTGCCGGTAGGAGTGGAAAA AAAAGGTGAACCTTTTGCACAATCACCAGGAAATGAAAACTGGTAGGGAC ACAGCAATATTTTTGCTATTGAAAGTTAGCCCTATTTATCAGTAACAGAT TGGGAAAATTTCGTTTGAATTCCATAAACTGTTTAGAAGTTAAATATAAT TTAGTAAACACAATTGACGTCAAAAAATATCACTTTTTTTGCATTCTGGT CCGTAAAATAGACACCTACAAGAAAATTTCGGACAGCAAACAAGTAAATT CGGAAACTTAGAGAAGACATAGTGCTACATGATGATATATGTTTGCACGT GCCTCTACGACTGTCATAGTTGACCTCCCACAGCTCCCAGACTAATACCA TCGCATAAAATTTTAATTTTCCAACTATTCAATCGAACACATTGCCTGCC AATTTAGTAATACCAATCGAAAGCTCACCCTACTTCCATAATTCAAATGA TA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036261TCONS_00036261Clytia hemisphaericatranscript
TCONS_00036260TCONS_00036260Clytia hemisphaericatranscript
TCONS_00036259TCONS_00036259Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001432supercontigsc0001432:26973..35574 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.46 0.39 0.26 0.39 12.1 10.2 11.92 14.88 17.02 16.33 17.35 17.55 14.2 16.77 1.18 1.95 1.37 5.94 0.77 3.12 8.02 9.72 0.37 10.28 10.43 12.24 0.42 3.59 1.3 0.86