TCONS_00036260 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036260
Unique NameTCONS_00036260
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5720

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036260 ID=TCONS_00036260|Name=TCONS_00036260|organism=Clytia hemisphaerica|type=transcript|length=5720bp
actcttctcgagatgcataaattcattgttgtcctcgttttcaaacagat
ttcattgctgtAAAAtcacatattcacaatgataattgtgttgtttacac
ctcatgagacattttgaatttcaagtacttttgtattagagttaatgttt
gccttttgggaatttaaattggtttaaatgtataatttcatagcaatgaa
atctgtttgaaaacgaggacaacaataaatttatgcatctcgagaagagt
gtattttgTGTGCTAAAATGTAattcgtaactcgcaactcgcgattttat
tttgttaaaatgcaactcgtaactcgtaacttgtaaaaagtaactcgcaa
ctcgtggttctaaatgcaactcgtaactcgtaacttgtaactcgtaactc
gcatatGAAAAATCCTCTGAAAATCAGACTTGAATGGATTAAGGAATTCT
TATCTATTCCTCTGTACACATAAAAAGGGGGAAAATAATGATTGGAAACA
AAATATGTGGAGCTTATGAAACATCTCTTTTTGTCTGCTGAGGTTAGGTG
AAAATTGCTAGTACAAGAAGAACAAATATATATTAGTTACATCAAATAGA
ATAATTAAATTCTTTTCGTCAGTTGGAAATCAATATTTTGCATCGTAGTG
TGTACTGAGAGGTGTCGTTAGATGGATCAGCTTTTAATTAAATTATATAA
TTATACGATAAAGCTTAAGAGACTCCTGAGCTAATGAGCCTCTTCCCTGG
ACTAAAAACGCTGTCTCCCTCGAGCTAATAGGGGTCGGTTCTCTGTGCCA
ATCTGACCGATCTTTTGACAGGACAAAAAACCATGGGTCGTTAAgtaaaa
tataaatcaaaaatgaagCTGCCATGTTCAGTTCTGTATTGCCTCTCGAA
TCATCTTTTCCGGCACTGTATCGCTAATTCGCAAATTTTCATGGAAGTTT
TTAGTCCTGCGTGTGACTGACTGATAGTTACCGAATAAATGTCTGTCATA
AAATTGTTCAATATATGAAAATTGTCTCATCAGGTAAGTCTATAGGTTAA
TCGTGTGATCGAATTCCGCGTACGTTCGTTTATGATTGATCGACAATTCT
GTGTGCGTTCGTTTATGATTGATCGACAATTCCGTGTGTATTTGCGTATG
TACATGTACGTTAATACAATTGTTCCGCATCAATGACATGAAAGAaatag
aaacaaagaaaagattagGTTAAGTATCCTAACCTGTTTGTTGACAAGAG
AGAGGAACAGCTAGCTACGAGCTACCATTTTTGTACGCTTCTGAACCCGT
CATGCATTGCGCAACAAACTGCCGGAGCCGAAAAGAATCTACTTTTCCGG
CTATTTTTCAAACCGCCGGAAATTCCGCTTCTTATCTATTCCTCTGTACA
CATAAAAAGGGGGAAAATAATGATTGGAAACAAAATATGTGGAGCTTATG
AAACATCTCTTTTTGTCTGCTGAGGTAACAAAAAAAGTAAAGCAGGAACC
AAAGACAAACACGAAATCGAAACGAAATACAGTAAACCAAAATCCTTGGT
GTTTATAGTCCCAACTTTCTAGAGACAGAGAATCGCTTTGTGTGACTGTC
CTTGATGTATCTGTCTCGACTATTGCCGAGGGACCATCGACCATGTTTGG
AAATCATTCTATCGGATACTCCAGCGTTTGCGGCAGAAGAAGCGCCGCCT
GCCCTCAAGGAATGCGTCCCTATCGTTTTTGGGTCAATGTTTTCTGGAAG
ATGGATTCTGATGTTTTCGAGAGCACTTGAGTAACTTATGCTGTACTTCC
CCAAGGCTTTATGGCCTATCTTGCACTTGGCGAGCCTGCAAATTACAAAA
TCCTCTTTTGTTATGTTCGCCAAAGCTATGTACTTCTTTGTCCAAGCGAC
CGGACAGGCAATCGACTTTGTTTCGCTAATGAATATGGTTTCCCCTTCCC
TAAGCTGATCAGTTTTGGACATCTCTAGGAAGATCTTCATGCCCTCTTGG
GTGAAAGAAAGATGCTTGAGCTGCAGGGGTAACAATTCTTTGATCCTCAT
GAATCCCGAAAAACCCAACAAAAACATTACTACGGCTCTGACTTCTAAGA
GGTTGTGAGATTGTGAATACTTCGTGGCAATGGCTATTAAGGTTTCGTTC
TCTAAAATGTCTTTGCGATTCTTGACAGTAAAAGGGGCAAGAGTTCTTTT
CGCGCCTTCCAAAGCTAGTTGAACAAAAGGGTGGTCAGTAGGAGGGATGA
GCCCAGACTTGATGTGACCCCAACGGATTGCTAAAAAAGCTGATGTTACT
GCGCCTACTTTCTCTCTGCGAATAGTTAAATGATTTAAATATAAAGCAAC
ATGAAGGGGGTCGGCTGGACAAGCGTTAATCTCCTGAAAACTGTTTGTGA
AATTGATCCATTTGTTCCAAGCTGGCTTATATTTCTTCAGTGTCGACTTA
GCATAGGCATTCTCAATCAGATCAGGTAGTGTAGAAGCTAGGTTCCTTAG
TTCAGGGTCTGTGAAATCACTCGAGGTTACTCCAAAGATGCTATTGTCAA
CAGCTCCtaaatggaaaaaataaataaaaagattttgaatacCTGAAAGT
GAACGTGATTTGTGATCCAGAATTCGAACCAACGAGGGATGAGCAAATAA
TCATGTCGTTAATGAGACCAACGAGGGTGTACCAACAAGGGTAGAGCGTC
TTGCAACCAGGCAAGGATAATCGTGTACCAACGAGGGTGTACCAACGAGG
GTGTACCAACAAGGGTAGAGTATTTTGCAACTAGGCAAGGATACTCTGTC
CAATTACATCTTCGCCATTCGAATGTATTGTAATCATTTTTCCATTTATG
TAATGTTCACCTTGATTGAGGCTGTCTCGTGCTGCTGGAATGTTGTTGTT
TTGGAGGTGGTGTAAGGAATCGTCAATTAAGTCTTCTATTTGTGTTTCAT
GAAGGAATTGGTCTTTATGTCCTTTTTTATTAAAAGACATTTGATCAGCT
TTCCTTTTCTTCGAGAGCTTCTCTGTTGTTCTTTGCAGTTTAGTTTCTGT
CTCTTGCAGAGTGGACTTGAGGCCACTCATCTCATTCTTTAGAGTGTTTG
TTATGTCAGTCTTGACTTTGTTCAAAAGATTTGTCACTTGTCTTTCATCC
ATGCTGTATGTTGTGATTTGAATTTCTCAGGTTATAAAAGCTGTGGTTAA
GTATCCTAACCTGTTTGTTGACAAGAGAGAGGAACAGCTAGCTACGAGCT
ACCATTTTTGTACGCTTCTGAACCCGTCATGCATTGCGCAACAAACTGCC
GGAGCCGAAAAGAATCTACTTTTCCGGCTATTTTTCAAACCGCCGGAAAT
TCCGCATATGATCAAGCTAGCTTCTACTTCTACAAGGCTGGATATATCTT
AATTGCAAGTAATCCTTTTAAATGTTCAATTAAAAGTCTCCAGAAGTGAG
GAAtaaaaataactattaaaaatgattgaaaaagctGAAGAGAATTTTCT
Tctctattttttcttcttcttggattacacgttgtttttttttataagga
gccttaactttgctctgagcctggagctCCTTATTTTTAccgagaatttc
agcctcaaagttccttatcgagttccttatttacatagctgctaagtttg
gataaccatctcttactgttccttaaaacttattttcttattctcagccc
gagcagttccttaacaattccttattttttggaccattttcagcctcgag
ttccttataaacgtcttccttatataaaaaaaacgtgtaactcgTGGATA
TTACATGGGAATGCCAATAGATTATTGCACTTTTTCCTCAATTAGATGAA
GACTTTTTTAATAATAAgaacaagaaagcctaagcggTGTAAAGGCCCAG
CAAGGTTGGCACTGTCAACATATTTTTCCGTTGCAGAATTACCATACAAC
AGGAGCAAATTTTACGCTAAAACgcgtgtgtttacaacgttctgtaaaca
gttttcgaaaatctaacaaagctctacaaagcctccccTTCACAGCGTTG
AACCATCGTCTTTTTGCACCTCATGCAGATCTCCTACCATTAGACGAGCT
TTGAGACGCCAAGTCACTATTTCTATACAGGAACATTTGAGCTGGATGGG
TTAAAATTAACCTTCTtcccaaatataatttttgctttCGAAGAATTCTT
ATTATAactttcaaaacatatattATACTTTGTTCTGGTTTGAACTCTGA
TCTTTATGAAGAATGTACATTCTTTTGAACCAGCAAGCCAACTGTGGCAT
GcgtaaatttagtttttttattcaagGTTATGGCAAGAGGGCCTTTTAAA
CTTTCACTTTAAAATTGTCTCTCTAATCTATATCAATACGCTAAAACGTT
CTGTAAAccgttttcgaaaatctaacaaagctctacaaagcctcctcttg
aCGGCGTTGAACGTTGAACGTCTTTTTTGCACCTCATGCAGATTTTCTAC
TCCTAGAAAATTTCTTACCACTAGACTTTCAATCCATAGCCCAATTTCCC
TAAAGTTGTCTTATTAATGTGAAAAAGCATATTTGGGGGATAATTGTTTA
GTAATGCATTACATTGTACGGCGTTTTGGTATCCTCCAAATACTAGaata
taaaaaacgaaagcTGAATATGGTTTGTTGAACTATTTTTGAACAAGTTG
GACGTCTAGGtctgtattttttaattttcgtttttcgacgtcagttttat
cattttgttatgtttttgattatacatagcgagcacctcactaaaaaccg
ggatttttcatcacGTTTCTTAgcgagttccactttgacgattttcgaaa
aatagaagcctttccaGTGTTTTGACGCAATTTCGATTGTTTTGCTACTG
CATGAGCTTCGaaaattaaaagtgacgtcaaaaaatcgaatgtttagagc
ccggaaacccgggctcaaaacattcgaaaaagtcgcaaagtggaatagac
gttaatggCGTAAAAAAAACGcaggtgacgtctagtataagCTANATTTT
TTACTTTTCGTTTTTCGACGtcagttttatcattttgttatgtttttgat
tATACATGGTTgtctttaaaattgaatatcttgagtttcatttaagtttt
tgaaacaaaactttcaacGTTTACTTATATGCTAAGGATCAATTCAATgg
aaaaatacgtcaaaaaatttagtttaaaacatgtctttttgaaaacgttt
gcCGGTAGGAGTGGAAAAAAAAGGTGAACCTTTTGCACAATCACCAGGAA
ATGAAAACTGGTAGGGACACAGCAATATTTTTGCTATTGAAAGTTAGCCC
TATTTATCAGTAACAGATTGGGAAAATTTCGTTTGAATTCCATAAACTGT
TTAGAAGTTAAATATAATTTAGTAAAcacaattgacgtcaaaaaatatca
ctttttttgcattctggtcCGTAAAATAGACACCTACAAGAAAATTTCGG
ACAGCAAACAAGTAAATTCGGAAACTTAGAGAAGACATAGTGCTACATGA
TGATATATGTTTGCACGTGCCTCTACGACTGTCATAGTTGACCTCCCACA
GCTCCCAGACTAATACCATCgcataaaattttaattttccaaCTATTCAA
TCGAACACATTGCCTGCCAATTTAGTAATACCAATCGAAAGCTCACCCTA
CTTCCATAATTCAAATGATA
Run BLAST on NCBI

transcript from alignment at sc0001432:26973..35569-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036260 ID=TCONS_00036260|Name=TCONS_00036260|organism=Clytia hemisphaerica|type=transcript|length=8597bp|location=Sequence derived from alignment at sc0001432:26973..35569- (Clytia hemisphaerica)
ACTCTTCTCGAGATGCATAAATTCATTGTTGTCCTCGTTTTCAAACAGAT TTCATTGCTGTAAAATCACATATTCACAATGATAATTGTGTTGTTTACAC CTCATGAGACATTTTGAATTTCAAGTACTTTTGTATTAGAGTTAATGTTT GCCTTTTGGGAATTTAAATTGGTTTAAATGTATAATTTCATAGCAATGAA ATCTGTTTGAAAACGAGGACAACAATAAATTTATGCATCTCGAGAAGAGT GTATTTTGTGTGCTAAAATGTAATTCGTAACTCGCAACTCGCGATTTTAT TTTGTTAAAATGCAACTCGTAACTCGTAACTTGTAAAAAGTAACTCGCAA CTCGTGGTTCTAAATGCAACTCGTAACTCGTAACTTGTAACTCGTAACTC GCATATGAAAAATCCTCTGAAAATCAGACTTGAATGGATTAAGGAATTCT TATCTATTCCTCTGTACACATAAAAAGGGGGAAAATAATGATTGGAAACA AAATATGTGGAGCTTATGAAACATCTCTTTTTGTCTGCTGAGGTTAGGTG AAAATTGCTAGTACAAGAAGAACAAATATATATTAGTTACATCAAATAGA ATAATTAAATTCTTTTCGTCAGTTGGAAATCAATATTTTGCATCGTAGTG TGTACTGAGAGGTGTCGTTAGATGGATCAGCTTTTAATTAAATTATATAA TTATACGATAAAGCTTAAGAGACTCCTGAGCTAATGAGCCTCTTCCCTGG ACTAAAAACGCTGTCTCCCTCGAGCTAATAGGGGTCGGTTCTCTGTGCCA ATCTGACCGATCTTTTGACAGGACAAAAAACCATGGGTCGTTAAGTAAAA TATAAATCAAAAATGAAGCTGCCATGTTCAGTTCTGTATTGCCTCTCGAA TCATCTTTTCCGGCACTGTATCGCTAATTCGCAAATTTTCATGGAAGTTT TTAGTCCTGCGTGTGACTGACTGATAGTTACCGAATAAATGTCTGTCATA AAATTGTTCAATATATGAAAATTGTCTCATCAGGTAAGTCTATAGGTTAA TCGTGTGATCGAATTCCGCGTACGTTCGTTTATGATTGATCGACAATTCT GTGTGCGTTCGTTTATGATTGATCGACAATTCCGTGTGTATTTGCGTATG TACATGTACGTTAATACAATTGTTCCGCATCAATGACATGAAAGAAATAG AAACAAAGAAAAGATTAGGTTAAGTATCCTAACCTGTTTGTTGACAAGAG AGAGGAACAGCTAGCTACGAGCTACCATTTTTGTACGCTTCTGAACCCGT CATGCATTGCGCAACAAACTGCCGGAGCCGAAAAGAATCTACTTTTCCGG CTATTTTTCAAACCGCCGGAAATTCCGCTTCTTATCTATTCCTCTGTACA CATAAAAAGGGGGAAAATAATGATTGGAAACAAAATATGTGGAGCTTATG AAACATCTCTTTTTGTCTGCTGAGGTAACAAAAAAAGTAAAGCAGGAACC AAAGACAAACACGAAATCGAAACGAAATACAGTAAACCAAAATCCTTGGT GTTTATAGTCCCAACTTTCTAGAGACAGAGAATCGCTTTGTGTGACTGTC CTTGATGTATCTGTCTCGACTATTGCCGAGGGACCATCGACCATGTTTGG AAATCATTCTATCGGATACTCCAGCGTTTGCGGCAGAAGAAGCGCCGCCT GCCCTCAAGGAATGCGTCCCTATCGTTTTTGGGTCAATGTTTTCTGGAAG ATGGATTCTGATGTTTTCGAGAGCACTTGAGTAACTTATGCTGTACTTCC CCAAGGCTTTATGGCCTATCTTGCACTTGGCGAGCCTGCAAATTACAAAA TCCTCTTTTGTTATGTTCGCCAAAGCTATGTACTTCTTTGTCCAAGCGAC CGGACAGGCAATCGACTTTGTTTCGCTAATGAATATGGTTTCCCCTTCCC TAAGCTGATCAGTTTTGGACATCTCTAGGAAGATCTTCATGCCCTCTTGG GTGAAAGAAAGATGCTTGAGCTGCAGGGGTAACAATTCTTTGATCCTCAT GAATCCCGAAAAACCCAACAAAAACATTACTACGGCTCTGACTTCTAAGA GGTTGTGAGATTGTGAATACTTCGTGGCAATGGCTATTAAGGTTTCGTTC TCTAAAATGTCTTTGCGATTCTTGACAGTAAAAGGGGCAAGAGTTCTTTT CGCGCCTTCCAAAGCTAGTTGAACAAAAGGGTGGTCAGTAGGAGGGATGA GCCCAGACTTGATGTGACCCCAACGGATTGCTAAAAAAGCTGATGTTACT GCGCCTACTTTCTCTCTGCGAATAGTTAAATGATTTAAATATAAAGCAAC ATGAAGGGGGTCGGCTGGACAAGCGTTAATCTCCTGAAAACTGTTTGTGA AATTGATCCATTTGTTCCAAGCTGGCTTATATTTCTTCAGTGTCGACTTA GCATAGGCATTCTCAATCAGATCAGGTAGTGTAGAAGCTAGGTTCCTTAG TTCAGGGTCTGTGAAATCACTCGAGGTTACTCCAAAGATGCTATTGTCAA CAGCTCCTAAATGGAAAAAATAAATAAAAAGATTTTGAATACCTGAAAGT GAACGTGATTTGTGATCCAGAATTCGAACCAACGAGGGATGAGCAAATAA TCATGTCGTTAATGAGACCAACGAGGGTGTACCAACAAGGGTAGAGCGTC TTGCAACCAGGCAAGGATAATCGTGTACCAACGAGGGTGTACCAACGAGG GTGTACCAACAAGGGTAGAGTATTTTGCAACTAGGCAAGGATACTCTGTC CAATTACATCTTCGCCATTCGAATGTATTGTAATCATTTTTCCATTTATG TAATGTTCACATGAAAGAAAGAATAGAAAAACATTATAGTGTGTCAGTTT GAGATAATGTAAAATGAGGTTGAACACTAATAGGTTTCAAAACTACGCAC TGGAATAGGTACAGGCAAATTAGAGTGATGTAAAGTGAACCTTGGTGAGA AATATTGAGACAGATCAACATACTGTTGTTTTTTCTTATATGTTTAAAAT GTTTACAAGACTAGTCAGTTACAAGTAACAATAAACAATAAATAGTGAAA GGTTGTTATGGGGTTTCCCCGGAGAAGTCTATCAGTAATGCAAGAGAATG AAATTTGGCGAAACCGTCAAACACAGAATCAGATAGTCTGGCAAAATTCC AGAAGTAAGGATCTAAAACGAGATAGTGTTTTATAAAAGTCTTGAAATAT CTGCCATCACTTGTCAGGAGTGGCCAAAAATATGATGACTGCCACATGGG AACGAAAAGCACTCCTTTTCCTCTGCACATTTTTAGGAATCTGATAGATC TACCGATAAGTCGGATTGGTGGGCACAACCAGTTGAAATCGTCTTTCCAA GTGATAGAAAAAGCATTGACCTGATTTGATCCGGGGCAATGGTATTTTGA GTTGAAGTTGCTCACTTTCCTATTGATGTTATCAGCAAATCTGTCCACAG TGAAGGGACCATAAACCGATTGGATGTATTCAAATGTCTCATCATCAATA CTCCAGTTGTCTGTGTCTTTTTCTTTTGAGATGGCGTCGGCGATCTTGTT TTCTTCTCGTGGTACCCAAATAGGGTAGAGAATAATGTTGTTCCTGATAC ACAAGTTGTAGATGGCAAGGGCTAATTCTTGAAGATGATGTCGTCTGGAT CCTGTTGATATTATTCTGGGAACGTTGTTATTATCTGTGAGCCACTGCAC GCATTGAGATTGGAGATGGTGAGCAAATGACTGAAGAACATACTTGACTG CTAACAACTCTCTGCTGGTAGAGCTTGTTTCTACTTCATGGTCGTGGAAG TCACCTCTTGCTATGACTTGGCCTAATTCTTGAATCAGGAATCCTCCATA GCTGCTGTTGCTGGCGTCAGAATACACAATTTTTGTTACCTGAGGTGTGT ATCTCATTTTTAGACCATTCGAGTCTTCAAGGTTAGACAGCCAGAATTTC AATTCATTGATGAGCTCAAAAGATAGGATTTTTGGAGTGTCCCATGAATA CCTGGACTCAATGAAAATGTGCATCTGTTTTGTGAAGAGTCTAGTCAGGG GGCCAATGGCTAAAGACATTGATGCTATGTGGCCTGCAATCCTTGATATA GCCCTTGGTGTTGCATGGGAGTGTTGTAGAACATGATTGATGTTGAGTAA CAGCTTACTTACTTTTTCTTGAGGAACTCGAAACATCATGTTGTTGGTGT CTATAATGAAGCCAATCCAAATGCCTTCACGAGTAGGCGTTAGTTGAGAT TTTTTTGAGGTTGATTGTTAATCCTGCTTCTGACAAGTCTCTTGTAATGG CGTTGCAAAGGATAACTGTTTCATCGAAGGAAGACCCTCCACAGATGCCG TCATCAAGATACATGGCACATTTTTTCCCTTCTGAACGCCACTTCTTGAT TAGTTGTTTCATCAACTTTGTGAAAATGAAACAAGCACTGCTGAGCCCAA AGGGGAGGACAGAGAACTGGAAAAATTTCATCTGACCTTCAATGATCCAT GAGAAACCTAAGTATTTTTTGAAGTCTGCATGTATTGGGACGTGATGATA ACCACTTTTTAAGTCAAAAGTTATGAAAAAATCTTTTTCCTCTAAAAACT CTGCTACAGTGCTAAGATTGTCATATTTAAACTTGTTCAAATCGATGAAC CGATTTACGTGTCTGAGATCAATGCAAAGCCTTAGTTTTGGTTTTTCTGC TACTGTTAGTGGATTCACACAGAAAGGGACTGACTGGGTTTCCTCAATGC AATTGTTCTTGAGCAGTTCTGCAATGCTGGTTGTCACAAAGTCATCATGT ACGAGGCTCGATCTGTTGTTAGGAGCATAGAATCGAGGGGGGTAGGCTTT AAAAGGAAGTTTGTAACCATTTGTCACTATGTCTACAACATGAGGCGGGG ACTTAAGATCATGTTTCCAAAAATCTGCATGGTGTCTAATCCCACCGGCT GCAAAGGCTTGTTGGCCTTCTTGGGACTCCCAGTCTCTGAGATTGTATCC TGAACAAATGAAAGTAAACAAGAACAAAGCTAGCTCTAAAACTGAGAATA TGTGGCTGCACTCCGGGGAAAACCCCCTGAGGTGTTCAAAAACAAATCAA TTTCTCGTATATGGAAAAAATAACACAAAAACAATAAAAACAAAATTCAA AATCCTTTGGCTTAAGCTTCAACTCAAATTATGTCTATGTTACTATGACA AAATGTAAACACGAAAAGGTTACTGTAAAAGTTAGTAAGATAGAATAATT GTCCTTTCATTATTTTCCTGTTTCTTTTGCGCCAGATGCTTTCTTATTGT CTAATTGAAGTTGGGGTATTTTTGGGAGCTCCTTGGTGGTAAATTCTCTC TCAAAGGGGCAATGTTGAATGTAATGACCAGTGATCTTGCAATTGTAGCA AACAATGTCGTCCATTTTGTTTTTGAAGGTCTTTGTGCCATCATAGGTCT TAGGTCTATGTGTCGACGAGGTAGAATACGAAGATGAAGGAGAGTCTCCT TTTGAATCAAATTTTGATTTCTTGAGTTTATCTCTGATGGTGGAGGCAGC TTTGATGGCCTTTTTTAACTTTTTCTCCTCCTCGTCATCAGAGGCTAGTT CATCTGATTTAAACTGTTGTACGGTCAACCACCCATCTCGGTCCGCAATA CAAATACATTTAATCCTGTCTTTAATTAACTTCTTACCTTGATTGAGGCT GTCTCGTGCTGCTGGAATGTTGTTGTTTTGGAGGTGGTGTAAGGAATCGT CAATTAAGTCTTCTATTTGTGTTTCATGAAGGAATTGGTCTTTATGTCCT TTTTTATTAAAAGACATTTGATCAGCTTTCCTTTTCTTCGAGAGCTTCTC TGTTGTTCTTTGCAGTTTAGTTTCTGTCTCTTGCAGAGTGGACTTGAGGC CACTCATCTCATTCTTTAGAGTGTTTGTTATGTCAGTCTTGACTTTGTTC AAAAGATTTGTCACTTGTCTTTCATCCATGCTGTATGTTGTGATTTGAAT TTCTCAGGTTATAAAAGCTGTGGTTAAGTATCCTAACCTGTTTGTTGACA AGAGAGAGGAACAGCTAGCTACGAGCTACCATTTTTGTACGCTTCTGAAC CCGTCATGCATTGCGCAACAAACTGCCGGAGCCGAAAAGAATCTACTTTT CCGGCTATTTTTCAAACCGCCGGAAATTCCGCATATGATCAAGCTAGCTT CTACTTCTACAAGGCTGGATATATCTTAATTGCAAGTAATCCTTTTAAAT GTTCAATTAAAAGTCTCCAGAAGTGAGGAATAAAAATAACTATTAAAAAT GATTGAAAAAGCTGAAGAGAATTTTCTTCTCTATTTTTTCTTCTTCTTGG ATTACACGTTGTTTTTTTTTATAAGGAGCCTTAACTTTGCTCTGAGCCTG GAGCTCCTTATTTTTACCGAGAATTTCAGCCTCAAAGTTCCTTATCGAGT TCCTTATTTACATAGCTGCTAAGTTTGGATAACCATCTCTTACTGTTCCT TAAAACTTATTTTCTTATTCTCAGCCCGAGCAGTTCCTTAACAATTCCTT ATTTTTTGGACCATTTTCAGCCTCGAGTTCCTTATAAACGTCTTCCTTAT ATAAAAAAAACGTGTAACTCGTGGATATTACATGGGAATGCCAATAGATT ATTGCACTTTTTCCTCAATTAGATGAAGACTTTTTTAATAATAAGAACAA GAAAGCCTAAGCGGTGTAAAGGCCCAGCAAGGTTGGCACTGTCAACATAT TTTTCCGTTGCAGAATTACCATACAACAGGAGCAAATTTTACGCTAAAAC GCGTGTGTTTACAACGTTCTGTAAACAGTTTTCGAAAATCTAACAAAGCT CTACAAAGCCTCCCCTTCACAGCGTTGAACCATCGTCTTTTTGCACCTCA TGCAGATCTCCTACCATTAGACGAGCTTTGAGACGCCAAGTCACTATTTC TATACAGGAACATTTGAGCTGGATGGGTTAAAATTAACCTTCTTCCCAAA TATAATTTTTGCTTTCGAAGAATTCTTATTATAACTTTCAAAACATATAT TATACTTTGTTCTGGTTTGAACTCTGATCTTTATGAAGAATGTACATTCT TTTGAACCAGCAAGCCAACTGTGGCATGCGTAAATTTAGTTTTTTTATTC AAGGTTATGGCAAGAGGGCCTTTTAAACTTTCACTTTAAAATTGTCTCTC TAATCTATATCAATACGCTAAAACGTTCTGTAAACCGTTTTCGAAAATCT AACAAAGCTCTACAAAGCCTCCTCTTGACGGCGTTGAACGTTGAACGTCT TTTTTGCACCTCATGCAGATTTTCTACTCCTAGAAAATTTCTTACCACTA GACTTTCAATCCATAGCCCAATTTCCCTAAAGTTGTCTTATTAATGTGAA AAAGCATATTTGGGGGATAATTGTTTAGTAATGCATTACATTGTACGGCG TTTTGGTATCCTCCAAATACTAGAATATAAAAAACGAAAGCTGAATATGG TTTGTTGAACTATTTTTGAACAAGTTGGACGTCTAGGTCTGTATTTTTTA ATTTTCGTTTTTCGACGTCAGTTTTATCATTTTGTTATGTTTTTGATTAT ACATAGCGAGCACCTCACTAAAAACCGGGATTTTTCATCACGTTTCTTAG CGAGTTCCACTTTGACGATTTTCGAAAAATAGAAGCCTTTCCAGTGTTTT GACGCAATTTCGATTGTTTTGCTACTGCATGAGCTTCGAAAATTAAAAGT GACGTCAAAAAATCGAATGTTTAGAGCCCGGAAACCCGGGCTCAAAACAT TCGAAAAAGTCGCAAAGTGGAATAGACGTTAATGGCGTAAAAAAAACGCA GGTGACGTCTAGTATAAGCTANATTTTTTACTTTTCGTTTTTCGACGTCA GTTTTATCATTTTGTTATGTTTTTGATTATACATGGTTGTCTTTAAAATT GAATATCTTGAGTTTCATTTAAGTTTTTGAAACAAAACTTTCAACGTTTA CTTATATGCTAAGGATCAATTCAATGGAAAAATACGTCAAAAAATTTAGT TTAAAACATGTCTTTTTGAAAACGTTTGCCGGTAGGAGTGGAAAAAAAAG GTGAACCTTTTGCACAATCACCAGGAAATGAAAACTGGTAGGGACACAGC AATATTTTTGCTATTGAAAGTTAGCCCTATTTATCAGTAACAGATTGGGA AAATTTCGTTTGAATTCCATAAACTGTTTAGAAGTTAAATATAATTTAGT AAACACAATTGACGTCAAAAAATATCACTTTTTTTGCATTCTGGTCCGTA AAATAGACACCTACAAGAAAATTTCGGACAGCAAACAAGTAAATTCGGAA ACTTAGAGAAGACATAGTGCTACATGATGATATATGTTTGCACGTGCCTC TACGACTGTCATAGTTGACCTCCCACAGCTCCCAGACTAATACCATCGCA TAAAATTTTAATTTTCCAACTATTCAATCGAACACATTGCCTGCCAATTT AGTAATACCAATCGAAAGCTCACCCTACTTCCATAATTCAAATGATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021325XLOC_021325Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036260-exon-sc0001432-1575043694:32710..35569TCONS_00036260-exon-sc0001432-1575043694:32710..35569Clytia hemisphaericaexon
TCONS_00036260-exon-sc0001432-1575043694:26973..29832TCONS_00036260-exon-sc0001432-1575043694:26973..29832Clytia hemisphaericaexon
TCONS_00036260-exon-sc0001432-1510915933:32710..35569TCONS_00036260-exon-sc0001432-1510915933:32710..35569Clytia hemisphaericaexon
TCONS_00036260-exon-sc0001432-1510915933:26973..29832TCONS_00036260-exon-sc0001432-1510915933:26973..29832Clytia hemisphaericaexon
TCONS_00036260-exon-sc0001432-1491911889:32710..35569TCONS_00036260-exon-sc0001432-1491911889:32710..35569Clytia hemisphaericaexon
TCONS_00036260-exon-sc0001432-1491911889:26973..29832TCONS_00036260-exon-sc0001432-1491911889:26973..29832Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001432supercontigsc0001432:26973..35569 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.100044 0.211504 0.236626 0.339689 0 0 0 0 1.27105 0.969799 0.00302327 0.831147 0.871973 3.20903e-09 0 0 0.293167 0 2.79661e-08 2.20019e-07 1.0565 2.6529e-09 0.294958 0 0 0 0.331905 0.922172 0 0.024012
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013762Integrase-like_cat
IPR002104Integrase_catalytic
IPR011010DNA_brk_join_enz
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006310DNA recombination
GO:0015074DNA integration
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006310 DNA recombination
molecular_function GO:0003677 DNA binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036260 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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