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Sequence
The following sequences are available for this feature:
gene from alignment at sc0001428:24064..35401+ Legend: gene Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021306 ID=XLOC_021306|Name=XLOC_021306|organism=Clytia hemisphaerica|type=gene|length=11338bp|location=Sequence derived from alignment at sc0001428:24064..35401+ (Clytia hemisphaerica)
CTCAGCTCAAATGATTATCAGGATGGCTTAGAAAGATACTTTGAAGGAGT
GAAGGCAGCAAAAAGCATATCCATGGCTggtcttaaaaatattttgtgtg
CCCTAGAAGGTAAGAGAAAGAATATCTATCTATTCTGAAAATCATGATTA
TCATATCAGTTTCAAAGAAACAGTCCCTTCCCTAcaaatttgaagatcaa
cttctcaagaaaaagatctatgggggagacggaacccacctagatcaaAT
AAGCCGGATAAGctatttcctggaaattttgccggacctcaaacagtGAT
TCATTGGGCGGTTCAAGTTATAGTCTGTTACCCCCCTGTGGACGACATGG
ATTTTCGTAACATAACATTTCTGtaacattcaagattttttttgggaaaa
tcttggattttctgatacttggcaagaaaatagagcaaGTTATATGGATT
TTCCGATACATATGACTAAATAATGAgaaaaaattcttgatttttggaaa
cctttttcaaatttctcagaatttccaagtgaaaaaaaaatcccaaaaac
aggggggtaatgttttttttctggaactgcccatttaccgtcaactgctc
taatttgggactatctgacaaaacatggcaCAGCAATATCACTGAACCTC
TGATGAATGACtgaaaagtcatttgatttgagttaataaacagcatatta
aaaaatacacgatttctctttctcaccgagtaggcttttaaatcagaata
tgaaaaaaatccatagaACACGGGCGAATGTCtggaccaaattagtggca
aaacaatggagcgtTTGTTACACACCTATTATTTGTTAATCCGATTAGGC
GATAAGCAGTTAGGCGGGAAGCGTTCTCTAGTTTATAAACatatttttcc
atgaaaaatagaaGAACTTTTGGTTATTTGAGTTCCCAAACATTGTAGAA
TCTTTTAGTACacatgacaaaagaaaaagagagaattaaaaccaatttaa
atcaaccaaattttttccATTATCCATACACATCAAAAAAATGTGTTTCA
CTATTTTTGAACTACTCTGAACTTCTTGCCATGTGACATATAATTTCCAA
TATCCAAAGAAAATGTGTGATTTGCATCACGTGGCCATACGATAGAAATG
TCAGCCGGTGACAAATGTggaaaattttgctataaaaagtgTTAAAAGTG
TTCAGCTCAAAAtccatagaaaaatataatgtttGGCTTAATGTTAACAA
AAGTAGCATGACTTCTGAAGTCACTATCTAAGGTGATTATGATAAAATTC
TAATATCAGAAGTTTACAGCCctttcgattgacttccaaatttgccatac
tcaccaactttgccaaatccacaatttcaatgtcaaaagatcacagcttc
atggcaaatttgtaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtggcgggaacttaat
ttggcggattttggctaaatccgccaaatccgccagattttctttccgcc
aatatttcttcttttaaggtaTAAGGTATAGAATTATTGCTTCTCTAGAC
TTTTAATCATTTGACTTGTCATGACACTTAATCACAGTATCTTAAGTACA
AACCCATACAAAGTATAAGTATAAAATTTGTATGTGTTAATGATTGGTTT
GAAAATCTTCTGCttttttttctagaataaaTCTGAAAAGCAGTTTCAAG
AATCACCGATTGTTGAACACAACACAGACAAGAAAAGTATGGTAAGAAAT
CATTAGAACTAGCGGTCTCAAATGTCGTCACAGACAATCACacaattcaa
aatatttgtaataATAGTAATGATAGTGATAGTAgtctttcaaatttcaa
ttccgacaaaatttcgaaaaaagcatACTTGCAACATTCTaatgatgaaa
tttcaaaatgccgTGATTAAATATGAGCCATTTAACCTATGCTGGTGGAG
TGAGTGAACACAAAATAATTCTGAACAATTAAATTACCTAGAACTTCTGA
AAATATAACAATCACTCAAAAGTTGGGCTTCAGGTGAGGAATGCTATCGA
TTTCAATTCTCTATTCTTCTTTTCCAAgtcaaacatttttaatgagaaTA
GTTGAAAACTGttggaaaaagaaaagttaACCCCCAGAAAAAGCTATACA
GCAAGCTAAAACTACTACTACTAGCAAAAATCAAATTGCTGCAGAGAAAG
GCTTCAGACACGGCTATTATTATTATAACAGAAGTAgttaaacaaaatca
aatcaaaaagatGACTTGTGAAATATATTACTCTATTATAgttaaattga
atttttttgtctaTCTATATTTCAGAATATGCCCAAGAAAGATGAATCAA
TAAGTGAACAGCATCCCGAAACACCAAACAAGGTAGAAACACCGAGCAAT
GTAGATATTCAATCATTTCAAGTAGAAAACCTAAAAAACCACTAATAAGT
CCTTGAAACGTCTTGGAAAGTAAACCCTTGAAATGTAAGAAATTCAATCC
TTTAAAACCCTAATGGATTTAACCTTCAggtttcttttaaataaatagCC
AATTTAAACTGCTAAATGCAAATCTCTTCCCAATATCTGTAGATAGATTT
TGCAGAGTATGACCAAGGGTCTGTCCAGGGCACCTTGTATTTTGCAAAGT
ATTAAAAAAGTCATAGTATTAAAAAGGAACCATATTAGAAAACAGACTTT
CCCTCAAATTCAAAGCAGTTTAAGAAAGAAAGGGGCTTGAAATAGATAAC
TTGACCTCGTTtaggtttttttatgattttaagttttgagttttgtttaa
aattcCTAGGTTATTGTGTACTTTCAAAACGTTGTTATTCACTCATATAA
TATACgcactaatttttgaaaatttttgttaaagaGGAATCACGGCAAAA
GCCTACCCTTGCAAACACAGTCgtctttatttttagaaaaaaaagaagaa
gaaaaagaattcaaaaagaCAGACaggtcaaaaatcaaaagattcgtcaa
caaaagaaaaagataatgtGTCAAATGTGGAAAGCCATTCTAAAATGAAA
GATCTGTCACAATCAAAAGACTCTAGGGATACAAAAGATTCAGATGTAGT
AAGTCCATGTTTCAAGGCCTTGGCATTCATTATAGTATTAGATTGCTGCC
TGTTCGtttgagaaagttgatttttggGTTTAATAAACAAGAAGTTCGAT
TTTGTACGAATTATACAAGTTGAACTGCGTACAAATTTATCATTGACATT
TTAGGATCCAATTATAGTTGTACTGATTGAAAGTCAGACAGAGGAAGATA
CTAGAATACTATCAGAAGATTTATCACAGGCAGTTTGTAATGTCAACAAG
GACAAGGTGAATTATTTTGAATGATACTCAGTTTCTAATATAGACTGTAG
TAATGATTGTGCTAGTTGTGAAAAGTAAATAAGAACAAGAAATTATTGGG
TTTTTTAGTAAGAAGGGTGTGATTTAATACTAATATTTCAGGATCCAGCT
GTATTAATCGAAGAGAGGATGAAAGAGAATACTAGAGATAAAGTTGTTGA
AGATCTATCAGAAGCTGTCTGCAGTGTAAACAAAAGCAAGGTAAACTTAT
CTCAATAAAGCTAAGTTTCTTACTAAATACATAGATGCTGGTTTATTGTG
ATATTAAGCGTACAGTAATTTTCGAGTTCTCATATCTCTTTTTTAGCCAA
AGAAACGGAAAGACCATGCAAATGAAGAAGTTACACCAATCGCCAAGACT
AAGGTATGAGCACAGAAGACTTAAGCTTACTCATTAAGAgtcatttttta
ttcattttccttTCTCTAAACTGAAAATactaaatttacaaaaaaattta
caaatttttaatCAAGATAAGCACAAGGAAAACAGGCCTGGTACACACAA
TGAAATGCAAGAATATCAATGCTTCCAATCAAATCTAAATTTCTAGAGAT
TCATGTGTTATATTTGCTTGCATAAACCTACCttttaatcttcatttttt
agaaaaacaagaaaaagccAGTCGAGAAGAATATCTTCATCACACAAGTT
CCTGTCTCACAGATGACCTTACCGCCGAGTGAAACAAGTCAAGATGAAAC
TGAAGTAGAGATGACACAACCTGTTTCCATCGATctaagtttgattgata
aaacCTTATCCTCTGATACAACAACCAATAGATCCAAAGATTCAAACAGC
TCATCTGTTGTATTTGTTGCTGACCATTCCATCAAAGAGGATAACCAGGA
ATACAGCCAGAGGAAGGAGAAATCTCAAAACGAGACTAATTTAAATGAGA
TGAGTGAGGTTTTTGAACCTAACAAGAGTGTCACCCTCAAAATGAAGAAG
TCCAAATGGGAAAAACAACCTACCAAAGATGTGGAAAATGTTTCAATGGA
GGAGAAGAAAAAGAACAAGGTTAAATCAGACCTTCATGGAACTTCGCCTC
AAAATAAAACAGTTTTTGATGATAAGGATTTCCAATCGCAGATAAAAGCA
TCCACCAAATCTGCAGAAAAACTAAAAGACAAGAAGTCATCCAAACGAAA
AAGCATGAAAAACAGACTAAGCGCTGGAAAGACTATAGATTTCAAAGAAC
GTAAGAAAACTAATGTGAACTCGAGTAAATTATTTGATTTGTCAGATGAG
GAAAATACAGAGAAAACAAACTCGAATCTTCCCAAATCCGCTAAACGAAG
GAAAATTTCAGAGAAGCAAACAGAGAATGCAAAGGATAGCTCAAGTAAAT
CACTTGATTTATCAGATGTAGAAAATGCAATTGAAACAAGCTCGAATCCT
CCCAAATCagctaaaagaaagaaaaactctAGGAAGCAGACAGAGAAGGC
AAAGGATAGCTCAAATTCATCAGATGAGAAAAATGCAATTGAAACAAGCT
CGAATCCTCCAAAATCAGCAAGAAAGAAAAACACGAGGAAGCAAACAGAG
AAGGCAAAGGATAGCTCAAATTCATCAGATgagaaaattacaaagaaaga
TACCTCTAATCCATCCAAATCGGCTAAGCGaagaaaaaactcaaagaaAC
GAACAGAGGAAGCAGCCCAATATACAGTTTCTTCGGCTTCTTCAGATGAC
GACTCATCTGATGCTGACAGCGACACAATTCGAAAACAGGTTCTCGAGAA
ACACAAAAGTCTACTCAGCTCTTCTCTTCCAAAAGCAAGATTACTGGTTA
ATGATCGATCAACCATGAATACAGAATCTAGTCAAGATGAGCTGTATGAT
CAAACTGTGAGGAAGGAAAATAAAGCTGCTAAATATCCCACCATTACTTT
AAAAGATTTAGAAGCAAGAATGGGCAAGAAAAAATCACAACCAAAATCTA
ACAAAATCAATAAGAAAAAGCGTAAGAAGAGGAGCTCGAGCTCAAGCAGG
TCATCTGACAGTGACAATGAAAGTGATCATACAGAAAAGAAAGACTGCAA
TAACAAAGAAACGACAGATAAAAACAAACGAATCAATCGATCCACTAAGC
AAGCATCTCTCTCTAGTTCTTCCGATGACAAAATAATCacaattacaaag
aaaattgataaaactaATGATAAGCAATCAACAAGCAAAAACAAAAGCAG
CAAACAATCAACTGTAGTCGCATCTCCTACCAGTTCAAGCAGCTCCTCTG
ATAGTGAAAATGAAGTATTAGCAAAGAAGATGAACACCAACCAATCACAA
TCAAGCAAAACTaaacaaagtaaacaaactACTTCTTCAAGCAGCTCCTC
TGATAGTGAAAATGAAGTATTATCAAAGAAGATGAACACCAACCAATCAC
AATCAAGCAAAACTaaacaaagtaaacaaactACTTCTTCAAGCAGCTCC
TCTGATAGTGAAAATGAATTATTATCAAAGAAGAAGAACACCAACCAATC
ACAATCAAGCAAAACTaaacaaagtaaacaaactACTTCTTCAAGCAGCT
CCTCTGATAGTGAAAATAAAGTATTATCAAAGAAGATGAACACCAACCAA
TCACAATCAAGCAAAACTaaacaaagtaaacaaactATTTCTTCAAGCAG
CTCCTCTGATAGTGAAAATAAAGTATTAGCAAAGAAGATGAACACCAACC
AATCACAATCAAACAAAACTaataaaagtaaacaaactaCTTCTTCAAAC
AGCCTGTCTGATAGTGAAGATGAAGTATCAGTCAACAACGTTCAACGTAA
ACATATGAAAACTACCAAGAAATCACCATCATCAGCAGATCAGGATGTGA
TAGTATCAGATAATGCTGCTTCCAGTAAAAATgtttctgaaaaaactaat
gaaaagttgaaaaagaccAATAAAAAGCAGACAAAAACATTGGATTCTAA
TAAAAATAAGAGAAGACATTCAACCAGCTCATCCTCCGACAGTGATTCTT
CTAACAGTGAACCTCTAAAAAAGGTGACAAAAACCAAAAGGAAAAGTGCT
GGGACCGGGGATACAACTAGTATCATTACTACAGAATCAAGTGAGGATGA
ATTCTACAATAAATTgttgaaacaaacaaaaaagaacaaggATGCTGATG
ACGATTCTTCAAGTGAAGAACCTGATATTGAATATTCTGAACTGCTCGAC
AAGTTGGTATGTATACATAGGTGTTATGATAGATATCACTCACGTTATTT
GAAGTCTGTCTCATCTTCATCTACTTCAtcttttttttcgcttttttctt
GGTACCTTTTTCATGTTATATCATTAAAAGCATTGGAAAactatttctca
aaaatccaaaccCGAAATTAGAAGAAGTGAGGTTCAAACATGGTGAAATT
TTTAAACTAAGTAGAAAAAATCCAGTCATAATTATCATGACCGTTTTTGC
AATTATTTTGCTCTgaacatttttttatcaaaatgttcCTTATAGCATGA
ATATAGTCAACGCATCACTGATTCAAGAGAAAACGAAAGAACTGGCAACA
AACATGGAAATGAAACTCCGTTCGGAAGAACCTCTATTGACAAAGTATGA
CCTTTAAAAAGGGAACCATTTTCAGTGGAAAGTTTTAATAGAGTTAAATC
ACTTCTgctgaaatatttcttttttaggaatttttctcatttctggggga
ctttttttgataaaatgagcCTGTTTTTGCAGTGTGTacagggggggtca
tgcagttattatataaacactatgacaattactaccgtggtggtatataa
accaaaatttgggaaaacagttactccaccagtggactaactgcaacatg
ggtggtgcctaagcccaaaattgtcgattttggtagcatatggtgtacta
agtgatcacatttttcaatttttcacttaaaattttaggtttttaaaaat
tccggaagcaaaaaaattagaaacatttttttcaaaagtaatttttcttc
aatcaagccatgaaagatattttaacaaacttggaaaatgattgagatat
ttaactcttgaacggtcgttaataagacgtacccagtaaaatggtatcaa
aaatgaggaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaagg
gtggtggtgtctgtagaaaatgttcaaaattgcagttactccacatagtg
tcaaggagtaactgcaagaccccccctgGTGTGTACAGACACAGGGTACC
CATAgccaggtggtggtgtctatttttgcatttcaaaaaagttagtacct
gGTACTACTTTTGGGGTgggggtgtgtatttttcactcttcaagCAAGTA
CAGGCTACTATTTGagtactttttcacagaattttgctttttttcaataa
aaaaagtagtttgttgtaatatttagacttttttcaaatattgatttttt
tgattttaaatctttttaattgacaatttttttttactcttttgagaaat
ttttttgatttgtttgaagacaaaacttccaaaatgggcaagaagtgtgt
gatgaaaatcaaaggacaaaagcttcTGACTCCATCATTGATAGTTTGCT
TGAATTATCTGTTAACTTTCAGTCTGAGAAACTAACAATAGTACTCCTCT
Cttggtctaatctgtaaaatttaagattttaggggtggtgtccttatttt
ttacagcaaaaatgaagtagtactcggtactaaatatgggtgggtggtac
taaacaaaattttagtaaaaaatcaagttagtaccctatgggttagtacc
ctgcctctgtACTCCCCCCCCCTGGTTTTtgtatttaaaatgaaaaggaa
CAGGTTTGATTTGATTTCCTACAATGAATTAGTGACCACGaagaactttt
ttgttttaCAGAGCATAACCGACGTTTCAAGAAATAACGAACTCTACAAA
AGCAAAGTTGAACGACATCCTGATTTAGATAAATATGATATAACCATACC
GAAGCTGATGGAAATGGGGGTCTCTATTGCTACTGGTTCGTGGTCAAACT
ATGAACTCTATATTTTATTCTTAAACATCAAGAATGCTAAAGTGAAGTTT
AAAATCGATAATTTCAAAGAATCTTATTTGTCTGGGGATGCCAAAACTGA
GAAGGTGGTGAGCGAACTATGCAAAAATATACTACGAAGACGTCGTACAA
TCAGAGATAAATTAGATGAAATTTTTGTACAAACCCCAACAGGGGAGAAA
AAGAGCACTTATTCTGAAGAAGAGTCTAAACAATTGTTGGAGTTGCATAA
GAAGTATAAGGGGGAGTGGAAAACGATCGCGGAGAAGCTTGACCGCTCAA
TTAAAAGTGTGAAACAAAGATACAAGTTGCTACAGAAGCAAGGTATGGGT
ACCACGAAGATGAAACCGAAAGCATTTACGGACGAAGAAGATGAACATCT
TTTGAGACTGGTAAAGGAATGCAAAGACCAAAAGCTGACCATCAGATCTG
GTAAACTTCCCTGGACATTAATTGCGGAGAAGTTGGAAAGTGGTAGAGAT
TCTTCAACTGTCAGAGCTCGCTTCACATTGCTGGCCTCAAAGACCGTGAA
GACGGCCAAACCATTTTTATCCAAACGTCAGCGATTTGCGTTGATTATTA
ATGTTTTGAAAGTGCTGGTAAGCAACAACCAGGATGACACCAATGATGTA
AACTGGGAGAAAGTGAAGCAAGCTGTAAAATACTCGGGTCAACCTGATAA
CCTCGCAAGAGAGTTCAAGGGATACATGAAAACAcatttcttgagaaaaa
aaatacctGCCAAATCGAACTCTGAACGTTTGAATCACATGTTGAAAAAT
GGATTACCTAAACGTAAACCTAAAGAACCTTGAAAATGTTGATCTCGCTG
GATTGTTATAGAGACTTGTTATTGTGTTGGTAAagattaaagggataatc
agatgggtTGAGATATATGGTCTGTAGTAACCTTCTACTACGGTCCTGAG
TAAAATCTCCAAGTATTTTGGTCTAACTATTTTGAAATTactgaaaatgg
gttcttacacggttcttTGGTTGTTCTTTTGTTGTAATTCttactaaaag
taaaaaaaacttataaCTAATATATTTCGACTTAAGAAGAAagttaggca
aaaatattttgaggttttgttCTTGGAAATAGAAGGAACCcatgtgccaa
atatttcaaaccatctgattatccctttaagaacTTTTTGATCTTTCATG
TAGAGAAAATATTGTTATGGAATTGTTGCTTATCTTAACTCCGTTTCTTA
TACATTTTACTTTGTTGACAACTGACGCTATCGTTTCTAGTTTGCTCCCT
TGGAATAGCCAATCTTTgagttttatggtttttgaGTCAATGTATGCCCA
CGCAAATTATAAAATTTACATCACAAGCAATCGAGCTCTATTtcttaaaa
ttcgaaacaaTATTTGTTACTGCATTAGTTATCAACAAAAAGATCGGTGC
ATTTTTACTATTGGTCACTACTTTAACTTGGACTTTACTTTTGTTGCCaa
ggtaaaattattttttcatttaatgtGTTTTTACTAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001428 | supercontig | sc0001428:24064..35401 + |
Orthologs
The following orthologs are found for this feature:
| Ortholog Name | Description | Organism |
|---|
| TCOF1 | PREDICTED: treacle protein isoform X1 | Homo Sapiens |
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