TCONS_00036218 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036218
Unique NameTCONS_00036218
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4930

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036218 ID=TCONS_00036218|Name=TCONS_00036218|organism=Clytia hemisphaerica|type=transcript|length=4930bp
CTCAGCTCAAATGATTATCAGGATGGCTTAGAAAGATACTTTGAAGGAGT
GAAGGCAGCAAAAAGCATATCCATGGCTggtcttaaaaatattttgtgtg
CCCTAGAAGaataaaTCTGAAAAGCAGTTTCAAGAATCACCGATTGTTGA
ACACAACACAGACAAGAAAAGTATGAATATGCCCAAGAAAGATGAATCAA
TAAGTGAACAGCATCCCGAAACACCAAACAAGaaaaaaaagaagaagaaa
aagaattcaaaaagaCAGACaggtcaaaaatcaaaagattcgtcaacaaa
agaaaaagataatgtGTCAAATGTGGAAAGCCATTCTAAAATGAAAGATC
TGTCACAATCAAAAGACTCTAGGGATACAAAAGATTCAGATGTAGATCCA
GCTGTATTAATCGAAGAGAGGATGAAAGAGAATACTAGAGATAAAGTTGT
TGAAGATCTATCAGAAGCTGTCTGCAGTGTAAACAAAAGCAAGCCAAAGA
AACGGAAAGACCATGCAAATGAAGAAGTTACACCAATCGCCAAGACTAAG
aaaaacaagaaaaagccAGTCGAGAAGAATATCTTCATCACACAAGTTCC
TGTCTCACAGATGACCTTACCGCCGAGTGAAACAAGTCAAGATGAAACTG
AAGTAGAGATGACACAACCTGTTTCCATCGATctaagtttgattgataaa
acCTTATCCTCTGATACAACAACCAATAGATCCAAAGATTCAAACAGCTC
ATCTGTTGTATTTGTTGCTGACCATTCCATCAAAGAGGATAACCAGGAAT
ACAGCCAGAGGAAGGAGAAATCTCAAAACGAGACTAATTTAAATGAGATG
AGTGAGGTTTTTGAACCTAACAAGAGTGTCACCCTCAAAATGAAGAAGTC
CAAATGGGAAAAACAACCTACCAAAGATGTGGAAAATGTTTCAATGGAGG
AGAAGAAAAAGAACAAGGTTAAATCAGACCTTCATGGAACTTCGCCTCAA
AATAAAACAGTTTTTGATGATAAGGATTTCCAATCGCAGATAAAAGCATC
CACCAAATCTGCAGAAAAACTAAAAGACAAGAAGTCATCCAAACGAAAAA
GCATGAAAAACAGACTAAGCGCTGGAAAGACTATAGATTTCAAAGAACGT
AAGAAAACTAATGTGAACTCGAGTAAATTATTTGATTTGTCAGATGAGGA
AAATACAGAGAAAACAAACTCGAATCTTCCCAAATCCGCTAAACGAAGGA
AAATTTCAGAGAAGCAAACAGAGAATGCAAAGGATAGCTCAAGTAAATCA
CTTGATTTATCAGATGTAGAAAATGCAATTGAAACAAGCTCGAATCCTCC
CAAATCagctaaaagaaagaaaaactctAGGAAGCAGACAGAGAAGGCAA
AGGATAGCTCAAATTCATCAGATGAGAAAAATGCAATTGAAACAAGCTCG
AATCCTCCAAAATCAGCAAGAAAGAAAAACACGAGGAAGCAAACAGAGAA
GGCAAAGGATAGCTCAAATTCATCAGATgagaaaattacaaagaaagaTA
CCTCTAATCCATCCAAATCGGCTAAGCGaagaaaaaactcaaagaaACGA
ACAGAGGAAGCAGCCCAATATACAGTTTCTTCGGCTTCTTCAGATGACGA
CTCATCTGATGCTGACAGCGACACAATTCGAAAACAGGTTCTCGAGAAAC
ACAAAAGTCTACTCAGCTCTTCTCTTCCAAAAGCAAGATTACTGGTTAAT
GATCGATCAACCATGAATACAGAATCTAGTCAAGATGAGCTGTATGATCA
AACTGTGAGGAAGGAAAATAAAGCTGCTAAATATCCCACCATTACTTTAA
AAGATTTAGAAGCAAGAATGGGCAAGAAAAAATCACAACCAAAATCTAAC
AAAATCAATAAGAAAAAGCGTAAGAAGAGGAGCTCGAGCTCAAGCAGGTC
ATCTGACAGTGACAATGAAAGTGATCATACAGAAAAGAAAGACTGCAATA
ACAAAGAAACGACAGATAAAAACAAACGAATCAATCGATCCACTAAGCAA
GCATCTCTCTCTAGTTCTTCCGATGACAAAATAATCacaattacaaagaa
aattgataaaactaATGATAAGCAATCAACAAGCAAAAACAAAAGCAGCA
AACAATCAACTGTAGTCGCATCTCCTACCAGTTCAAGCAGCTCCTCTGAT
AGTGAAAATGAAGTATTAGCAAAGAAGATGAACACCAACCAATCACAATC
AAGCAAAACTaaacaaagtaaacaaactACTTCTTCAAGCAGCTCCTCTG
ATAGTGAAAATGAAGTATTATCAAAGAAGATGAACACCAACCAATCACAA
TCAAGCAAAACTaaacaaagtaaacaaactACTTCTTCAAGCAGCTCCTC
TGATAGTGAAAATGAATTATTATCAAAGAAGAAGAACACCAACCAATCAC
AATCAAGCAAAACTaaacaaagtaaacaaactACTTCTTCAAGCAGCTCC
TCTGATAGTGAAAATAAAGTATTATCAAAGAAGATGAACACCAACCAATC
ACAATCAAGCAAAACTaaacaaagtaaacaaactATTTCTTCAAGCAGCT
CCTCTGATAGTGAAAATAAAGTATTAGCAAAGAAGATGAACACCAACCAA
TCACAATCAAACAAAACTaataaaagtaaacaaactaCTTCTTCAAACAG
CCTGTCTGATAGTGAAGATGAAGTATCAGTCAACAACGTTCAACGTAAAC
ATATGAAAACTACCAAGAAATCACCATCATCAGCAGATCAGGATGTGATA
GTATCAGATAATGCTGCTTCCAGTAAAAATgtttctgaaaaaactaatga
aaagttgaaaaagaccAATAAAAAGCAGACAAAAACATTGGATTCTAATA
AAAATAAGAGAAGACATTCAACCAGCTCATCCTCCGACAGTGATTCTTCT
AACAGTGAACCTCTAAAAAAGGTGACAAAAACCAAAAGGAAAAGTGCTGG
GACCGGGGATACAACTAGTATCATTACTACAGAATCAAGTGAGGATGAAT
TCTACAATAAATTgttgaaacaaacaaaaaagaacaaggATGCTGATGAC
GATTCTTCAAGTGAAGAACCTGATATTGAATATTCTGAACTGCTCGACAA
GTTGCATGAATATAGTCAACGCATCACTGATTCAAGAGAAAACGAAAGAA
CTGGCAACAAACATGGAAATGAAACTCCGTTCGGAAGAACCTCTATTGAC
AAAAGCATAACCGACGTTTCAAGAAATAACGAACTCTACAAAAGCAAAGT
TGAACGACATCCTGATTTAGATAAATATGATATAACCATACCGAAGCTGA
TGGAAATGGGGGTCTCTATTGCTACTGGTTCGTGGTCAAACTATGAACTC
TATATTTTATTCTTAAACATCAAGAATGCTAAAGTGAAGTTTAAAATCGA
TAATTTCAAAGAATCTTATTTGTCTGGGGATGCCAAAACTGAGAAGGTGG
TGAGCGAACTATGCAAAAATATACTACGAAGACGTCGTACAATCAGAGAT
AAATTAGATGAAATTTTTGTACAAACCCCAACAGGGGAGAAAAAGAGCAC
TTATTCTGAAGAAGAGTCTAAACAATTGTTGGAGTTGCATAAGAAGTATA
AGGGGGAGTGGAAAACGATCGCGGAGAAGCTTGACCGCTCAATTAAAAGT
GTGAAACAAAGATACAAGTTGCTACAGAAGCAAGGTATGGGTACCACGAA
GATGAAACCGAAAGCATTTACGGACGAAGAAGATGAACATCTTTTGAGAC
TGGTAAAGGAATGCAAAGACCAAAAGCTGACCATCAGATCTGGTAAACTT
CCCTGGACATTAATTGCGGAGAAGTTGGAAAGTGGTAGAGATTCTTCAAC
TGTCAGAGCTCGCTTCACATTGCTGGCCTCAAAGACCGTGAAGACGGCCA
AACCATTTTTATCCAAACGTCAGCGATTTGCGTTGATTATTAATGTTTTG
AAAGTGCTGGTAAGCAACAACCAGGATGACACCAATGATGTAAACTGGGA
GAAAGTGAAGCAAGCTGTAAAATACTCGGGTCAACCTGATAACCTCGCAA
GAGAGTTCAAGGGATACATGAAAACAcatttcttgagaaaaaaaatacct
GCCAAATCGAACTCTGAACGTTTGAATCACATGTTGAAAAATGGATTACC
TAAACGTAAACCTAAAGAACCTTGAAAATGTTGATCTCGCTGGATTGTTA
TAGAGACTTGTTATTGTGTTGGTAAagattaaagggataatcagatgggt
TGAGATATATGGTCTGTAGTAACCTTCTACTACGGTCCTGAGTAAAATCT
CCAAGTATTTTGGTCTAACTATTTTGAAATTactgaaaatgggttcttac
acggttcttTGGTTGTTCTTTTGTTGTAATTCttactaaaagtaaaaaaa
acttataaCTAATATATTTCGACTTAAGAAGAAagttaggcaaaaatatt
ttgaggttttgttCTTGGAAATAGAAGGAACCcatgtgccaaatatttca
aaccatctgattatccctttaagaacTTTTTGATCTTTCATGTAGAGAAA
ATATTGTTATGGAATTGTTGCTTATCTTAACTCCGTTTCTTATACATTTT
ACTTTGTTGACAACTGACGCTATCGTTTCTAGTTTGCTCCCTTGGAATAG
CCAATCTTTgagttttatggtttttgaGTCAATGTATGCCCACGCAAATT
ATAAAATTTACATCACAAGCAATCGAGCTCTATTtcttaaaattcgaaac
aaTATTTGTTACTGCATTAGTTATCAACAAAAAGATCGGTGCATTTTTAC
TATTGGTCACTACTTTAACTTGGACTTTACTTTTGTTGCCaaggtaaaat
tattttttcatttaatgtGTTTTTACTAAC
Run BLAST on NCBI

transcript from alignment at sc0001428:24064..35401+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036218 ID=TCONS_00036218|Name=TCONS_00036218|organism=Clytia hemisphaerica|type=transcript|length=11338bp|location=Sequence derived from alignment at sc0001428:24064..35401+ (Clytia hemisphaerica)
CTCAGCTCAAATGATTATCAGGATGGCTTAGAAAGATACTTTGAAGGAGT
GAAGGCAGCAAAAAGCATATCCATGGCTggtcttaaaaatattttgtgtg
CCCTAGAAGGTAAGAGAAAGAATATCTATCTATTCTGAAAATCATGATTA
TCATATCAGTTTCAAAGAAACAGTCCCTTCCCTAcaaatttgaagatcaa
cttctcaagaaaaagatctatgggggagacggaacccacctagatcaaAT
AAGCCGGATAAGctatttcctggaaattttgccggacctcaaacagtGAT
TCATTGGGCGGTTCAAGTTATAGTCTGTTACCCCCCTGTGGACGACATGG
ATTTTCGTAACATAACATTTCTGtaacattcaagattttttttgggaaaa
tcttggattttctgatacttggcaagaaaatagagcaaGTTATATGGATT
TTCCGATACATATGACTAAATAATGAgaaaaaattcttgatttttggaaa
cctttttcaaatttctcagaatttccaagtgaaaaaaaaatcccaaaaac
aggggggtaatgttttttttctggaactgcccatttaccgtcaactgctc
taatttgggactatctgacaaaacatggcaCAGCAATATCACTGAACCTC
TGATGAATGACtgaaaagtcatttgatttgagttaataaacagcatatta
aaaaatacacgatttctctttctcaccgagtaggcttttaaatcagaata
tgaaaaaaatccatagaACACGGGCGAATGTCtggaccaaattagtggca
aaacaatggagcgtTTGTTACACACCTATTATTTGTTAATCCGATTAGGC
GATAAGCAGTTAGGCGGGAAGCGTTCTCTAGTTTATAAACatatttttcc
atgaaaaatagaaGAACTTTTGGTTATTTGAGTTCCCAAACATTGTAGAA
TCTTTTAGTACacatgacaaaagaaaaagagagaattaaaaccaatttaa
atcaaccaaattttttccATTATCCATACACATCAAAAAAATGTGTTTCA
CTATTTTTGAACTACTCTGAACTTCTTGCCATGTGACATATAATTTCCAA
TATCCAAAGAAAATGTGTGATTTGCATCACGTGGCCATACGATAGAAATG
TCAGCCGGTGACAAATGTggaaaattttgctataaaaagtgTTAAAAGTG
TTCAGCTCAAAAtccatagaaaaatataatgtttGGCTTAATGTTAACAA
AAGTAGCATGACTTCTGAAGTCACTATCTAAGGTGATTATGATAAAATTC
TAATATCAGAAGTTTACAGCCctttcgattgacttccaaatttgccatac
tcaccaactttgccaaatccacaatttcaatgtcaaaagatcacagcttc
atggcaaatttgtaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtggcgggaacttaat
ttggcggattttggctaaatccgccaaatccgccagattttctttccgcc
aatatttcttcttttaaggtaTAAGGTATAGAATTATTGCTTCTCTAGAC
TTTTAATCATTTGACTTGTCATGACACTTAATCACAGTATCTTAAGTACA
AACCCATACAAAGTATAAGTATAAAATTTGTATGTGTTAATGATTGGTTT
GAAAATCTTCTGCttttttttctagaataaaTCTGAAAAGCAGTTTCAAG
AATCACCGATTGTTGAACACAACACAGACAAGAAAAGTATGGTAAGAAAT
CATTAGAACTAGCGGTCTCAAATGTCGTCACAGACAATCACacaattcaa
aatatttgtaataATAGTAATGATAGTGATAGTAgtctttcaaatttcaa
ttccgacaaaatttcgaaaaaagcatACTTGCAACATTCTaatgatgaaa
tttcaaaatgccgTGATTAAATATGAGCCATTTAACCTATGCTGGTGGAG
TGAGTGAACACAAAATAATTCTGAACAATTAAATTACCTAGAACTTCTGA
AAATATAACAATCACTCAAAAGTTGGGCTTCAGGTGAGGAATGCTATCGA
TTTCAATTCTCTATTCTTCTTTTCCAAgtcaaacatttttaatgagaaTA
GTTGAAAACTGttggaaaaagaaaagttaACCCCCAGAAAAAGCTATACA
GCAAGCTAAAACTACTACTACTAGCAAAAATCAAATTGCTGCAGAGAAAG
GCTTCAGACACGGCTATTATTATTATAACAGAAGTAgttaaacaaaatca
aatcaaaaagatGACTTGTGAAATATATTACTCTATTATAgttaaattga
atttttttgtctaTCTATATTTCAGAATATGCCCAAGAAAGATGAATCAA
TAAGTGAACAGCATCCCGAAACACCAAACAAGGTAGAAACACCGAGCAAT
GTAGATATTCAATCATTTCAAGTAGAAAACCTAAAAAACCACTAATAAGT
CCTTGAAACGTCTTGGAAAGTAAACCCTTGAAATGTAAGAAATTCAATCC
TTTAAAACCCTAATGGATTTAACCTTCAggtttcttttaaataaatagCC
AATTTAAACTGCTAAATGCAAATCTCTTCCCAATATCTGTAGATAGATTT
TGCAGAGTATGACCAAGGGTCTGTCCAGGGCACCTTGTATTTTGCAAAGT
ATTAAAAAAGTCATAGTATTAAAAAGGAACCATATTAGAAAACAGACTTT
CCCTCAAATTCAAAGCAGTTTAAGAAAGAAAGGGGCTTGAAATAGATAAC
TTGACCTCGTTtaggtttttttatgattttaagttttgagttttgtttaa
aattcCTAGGTTATTGTGTACTTTCAAAACGTTGTTATTCACTCATATAA
TATACgcactaatttttgaaaatttttgttaaagaGGAATCACGGCAAAA
GCCTACCCTTGCAAACACAGTCgtctttatttttagaaaaaaaagaagaa
gaaaaagaattcaaaaagaCAGACaggtcaaaaatcaaaagattcgtcaa
caaaagaaaaagataatgtGTCAAATGTGGAAAGCCATTCTAAAATGAAA
GATCTGTCACAATCAAAAGACTCTAGGGATACAAAAGATTCAGATGTAGT
AAGTCCATGTTTCAAGGCCTTGGCATTCATTATAGTATTAGATTGCTGCC
TGTTCGtttgagaaagttgatttttggGTTTAATAAACAAGAAGTTCGAT
TTTGTACGAATTATACAAGTTGAACTGCGTACAAATTTATCATTGACATT
TTAGGATCCAATTATAGTTGTACTGATTGAAAGTCAGACAGAGGAAGATA
CTAGAATACTATCAGAAGATTTATCACAGGCAGTTTGTAATGTCAACAAG
GACAAGGTGAATTATTTTGAATGATACTCAGTTTCTAATATAGACTGTAG
TAATGATTGTGCTAGTTGTGAAAAGTAAATAAGAACAAGAAATTATTGGG
TTTTTTAGTAAGAAGGGTGTGATTTAATACTAATATTTCAGGATCCAGCT
GTATTAATCGAAGAGAGGATGAAAGAGAATACTAGAGATAAAGTTGTTGA
AGATCTATCAGAAGCTGTCTGCAGTGTAAACAAAAGCAAGGTAAACTTAT
CTCAATAAAGCTAAGTTTCTTACTAAATACATAGATGCTGGTTTATTGTG
ATATTAAGCGTACAGTAATTTTCGAGTTCTCATATCTCTTTTTTAGCCAA
AGAAACGGAAAGACCATGCAAATGAAGAAGTTACACCAATCGCCAAGACT
AAGGTATGAGCACAGAAGACTTAAGCTTACTCATTAAGAgtcatttttta
ttcattttccttTCTCTAAACTGAAAATactaaatttacaaaaaaattta
caaatttttaatCAAGATAAGCACAAGGAAAACAGGCCTGGTACACACAA
TGAAATGCAAGAATATCAATGCTTCCAATCAAATCTAAATTTCTAGAGAT
TCATGTGTTATATTTGCTTGCATAAACCTACCttttaatcttcatttttt
agaaaaacaagaaaaagccAGTCGAGAAGAATATCTTCATCACACAAGTT
CCTGTCTCACAGATGACCTTACCGCCGAGTGAAACAAGTCAAGATGAAAC
TGAAGTAGAGATGACACAACCTGTTTCCATCGATctaagtttgattgata
aaacCTTATCCTCTGATACAACAACCAATAGATCCAAAGATTCAAACAGC
TCATCTGTTGTATTTGTTGCTGACCATTCCATCAAAGAGGATAACCAGGA
ATACAGCCAGAGGAAGGAGAAATCTCAAAACGAGACTAATTTAAATGAGA
TGAGTGAGGTTTTTGAACCTAACAAGAGTGTCACCCTCAAAATGAAGAAG
TCCAAATGGGAAAAACAACCTACCAAAGATGTGGAAAATGTTTCAATGGA
GGAGAAGAAAAAGAACAAGGTTAAATCAGACCTTCATGGAACTTCGCCTC
AAAATAAAACAGTTTTTGATGATAAGGATTTCCAATCGCAGATAAAAGCA
TCCACCAAATCTGCAGAAAAACTAAAAGACAAGAAGTCATCCAAACGAAA
AAGCATGAAAAACAGACTAAGCGCTGGAAAGACTATAGATTTCAAAGAAC
GTAAGAAAACTAATGTGAACTCGAGTAAATTATTTGATTTGTCAGATGAG
GAAAATACAGAGAAAACAAACTCGAATCTTCCCAAATCCGCTAAACGAAG
GAAAATTTCAGAGAAGCAAACAGAGAATGCAAAGGATAGCTCAAGTAAAT
CACTTGATTTATCAGATGTAGAAAATGCAATTGAAACAAGCTCGAATCCT
CCCAAATCagctaaaagaaagaaaaactctAGGAAGCAGACAGAGAAGGC
AAAGGATAGCTCAAATTCATCAGATGAGAAAAATGCAATTGAAACAAGCT
CGAATCCTCCAAAATCAGCAAGAAAGAAAAACACGAGGAAGCAAACAGAG
AAGGCAAAGGATAGCTCAAATTCATCAGATgagaaaattacaaagaaaga
TACCTCTAATCCATCCAAATCGGCTAAGCGaagaaaaaactcaaagaaAC
GAACAGAGGAAGCAGCCCAATATACAGTTTCTTCGGCTTCTTCAGATGAC
GACTCATCTGATGCTGACAGCGACACAATTCGAAAACAGGTTCTCGAGAA
ACACAAAAGTCTACTCAGCTCTTCTCTTCCAAAAGCAAGATTACTGGTTA
ATGATCGATCAACCATGAATACAGAATCTAGTCAAGATGAGCTGTATGAT
CAAACTGTGAGGAAGGAAAATAAAGCTGCTAAATATCCCACCATTACTTT
AAAAGATTTAGAAGCAAGAATGGGCAAGAAAAAATCACAACCAAAATCTA
ACAAAATCAATAAGAAAAAGCGTAAGAAGAGGAGCTCGAGCTCAAGCAGG
TCATCTGACAGTGACAATGAAAGTGATCATACAGAAAAGAAAGACTGCAA
TAACAAAGAAACGACAGATAAAAACAAACGAATCAATCGATCCACTAAGC
AAGCATCTCTCTCTAGTTCTTCCGATGACAAAATAATCacaattacaaag
aaaattgataaaactaATGATAAGCAATCAACAAGCAAAAACAAAAGCAG
CAAACAATCAACTGTAGTCGCATCTCCTACCAGTTCAAGCAGCTCCTCTG
ATAGTGAAAATGAAGTATTAGCAAAGAAGATGAACACCAACCAATCACAA
TCAAGCAAAACTaaacaaagtaaacaaactACTTCTTCAAGCAGCTCCTC
TGATAGTGAAAATGAAGTATTATCAAAGAAGATGAACACCAACCAATCAC
AATCAAGCAAAACTaaacaaagtaaacaaactACTTCTTCAAGCAGCTCC
TCTGATAGTGAAAATGAATTATTATCAAAGAAGAAGAACACCAACCAATC
ACAATCAAGCAAAACTaaacaaagtaaacaaactACTTCTTCAAGCAGCT
CCTCTGATAGTGAAAATAAAGTATTATCAAAGAAGATGAACACCAACCAA
TCACAATCAAGCAAAACTaaacaaagtaaacaaactATTTCTTCAAGCAG
CTCCTCTGATAGTGAAAATAAAGTATTAGCAAAGAAGATGAACACCAACC
AATCACAATCAAACAAAACTaataaaagtaaacaaactaCTTCTTCAAAC
AGCCTGTCTGATAGTGAAGATGAAGTATCAGTCAACAACGTTCAACGTAA
ACATATGAAAACTACCAAGAAATCACCATCATCAGCAGATCAGGATGTGA
TAGTATCAGATAATGCTGCTTCCAGTAAAAATgtttctgaaaaaactaat
gaaaagttgaaaaagaccAATAAAAAGCAGACAAAAACATTGGATTCTAA
TAAAAATAAGAGAAGACATTCAACCAGCTCATCCTCCGACAGTGATTCTT
CTAACAGTGAACCTCTAAAAAAGGTGACAAAAACCAAAAGGAAAAGTGCT
GGGACCGGGGATACAACTAGTATCATTACTACAGAATCAAGTGAGGATGA
ATTCTACAATAAATTgttgaaacaaacaaaaaagaacaaggATGCTGATG
ACGATTCTTCAAGTGAAGAACCTGATATTGAATATTCTGAACTGCTCGAC
AAGTTGGTATGTATACATAGGTGTTATGATAGATATCACTCACGTTATTT
GAAGTCTGTCTCATCTTCATCTACTTCAtcttttttttcgcttttttctt
GGTACCTTTTTCATGTTATATCATTAAAAGCATTGGAAAactatttctca
aaaatccaaaccCGAAATTAGAAGAAGTGAGGTTCAAACATGGTGAAATT
TTTAAACTAAGTAGAAAAAATCCAGTCATAATTATCATGACCGTTTTTGC
AATTATTTTGCTCTgaacatttttttatcaaaatgttcCTTATAGCATGA
ATATAGTCAACGCATCACTGATTCAAGAGAAAACGAAAGAACTGGCAACA
AACATGGAAATGAAACTCCGTTCGGAAGAACCTCTATTGACAAAGTATGA
CCTTTAAAAAGGGAACCATTTTCAGTGGAAAGTTTTAATAGAGTTAAATC
ACTTCTgctgaaatatttcttttttaggaatttttctcatttctggggga
ctttttttgataaaatgagcCTGTTTTTGCAGTGTGTacagggggggtca
tgcagttattatataaacactatgacaattactaccgtggtggtatataa
accaaaatttgggaaaacagttactccaccagtggactaactgcaacatg
ggtggtgcctaagcccaaaattgtcgattttggtagcatatggtgtacta
agtgatcacatttttcaatttttcacttaaaattttaggtttttaaaaat
tccggaagcaaaaaaattagaaacatttttttcaaaagtaatttttcttc
aatcaagccatgaaagatattttaacaaacttggaaaatgattgagatat
ttaactcttgaacggtcgttaataagacgtacccagtaaaatggtatcaa
aaatgaggaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaagg
gtggtggtgtctgtagaaaatgttcaaaattgcagttactccacatagtg
tcaaggagtaactgcaagaccccccctgGTGTGTACAGACACAGGGTACC
CATAgccaggtggtggtgtctatttttgcatttcaaaaaagttagtacct
gGTACTACTTTTGGGGTgggggtgtgtatttttcactcttcaagCAAGTA
CAGGCTACTATTTGagtactttttcacagaattttgctttttttcaataa
aaaaagtagtttgttgtaatatttagacttttttcaaatattgatttttt
tgattttaaatctttttaattgacaatttttttttactcttttgagaaat
ttttttgatttgtttgaagacaaaacttccaaaatgggcaagaagtgtgt
gatgaaaatcaaaggacaaaagcttcTGACTCCATCATTGATAGTTTGCT
TGAATTATCTGTTAACTTTCAGTCTGAGAAACTAACAATAGTACTCCTCT
Cttggtctaatctgtaaaatttaagattttaggggtggtgtccttatttt
ttacagcaaaaatgaagtagtactcggtactaaatatgggtgggtggtac
taaacaaaattttagtaaaaaatcaagttagtaccctatgggttagtacc
ctgcctctgtACTCCCCCCCCCTGGTTTTtgtatttaaaatgaaaaggaa
CAGGTTTGATTTGATTTCCTACAATGAATTAGTGACCACGaagaactttt
ttgttttaCAGAGCATAACCGACGTTTCAAGAAATAACGAACTCTACAAA
AGCAAAGTTGAACGACATCCTGATTTAGATAAATATGATATAACCATACC
GAAGCTGATGGAAATGGGGGTCTCTATTGCTACTGGTTCGTGGTCAAACT
ATGAACTCTATATTTTATTCTTAAACATCAAGAATGCTAAAGTGAAGTTT
AAAATCGATAATTTCAAAGAATCTTATTTGTCTGGGGATGCCAAAACTGA
GAAGGTGGTGAGCGAACTATGCAAAAATATACTACGAAGACGTCGTACAA
TCAGAGATAAATTAGATGAAATTTTTGTACAAACCCCAACAGGGGAGAAA
AAGAGCACTTATTCTGAAGAAGAGTCTAAACAATTGTTGGAGTTGCATAA
GAAGTATAAGGGGGAGTGGAAAACGATCGCGGAGAAGCTTGACCGCTCAA
TTAAAAGTGTGAAACAAAGATACAAGTTGCTACAGAAGCAAGGTATGGGT
ACCACGAAGATGAAACCGAAAGCATTTACGGACGAAGAAGATGAACATCT
TTTGAGACTGGTAAAGGAATGCAAAGACCAAAAGCTGACCATCAGATCTG
GTAAACTTCCCTGGACATTAATTGCGGAGAAGTTGGAAAGTGGTAGAGAT
TCTTCAACTGTCAGAGCTCGCTTCACATTGCTGGCCTCAAAGACCGTGAA
GACGGCCAAACCATTTTTATCCAAACGTCAGCGATTTGCGTTGATTATTA
ATGTTTTGAAAGTGCTGGTAAGCAACAACCAGGATGACACCAATGATGTA
AACTGGGAGAAAGTGAAGCAAGCTGTAAAATACTCGGGTCAACCTGATAA
CCTCGCAAGAGAGTTCAAGGGATACATGAAAACAcatttcttgagaaaaa
aaatacctGCCAAATCGAACTCTGAACGTTTGAATCACATGTTGAAAAAT
GGATTACCTAAACGTAAACCTAAAGAACCTTGAAAATGTTGATCTCGCTG
GATTGTTATAGAGACTTGTTATTGTGTTGGTAAagattaaagggataatc
agatgggtTGAGATATATGGTCTGTAGTAACCTTCTACTACGGTCCTGAG
TAAAATCTCCAAGTATTTTGGTCTAACTATTTTGAAATTactgaaaatgg
gttcttacacggttcttTGGTTGTTCTTTTGTTGTAATTCttactaaaag
taaaaaaaacttataaCTAATATATTTCGACTTAAGAAGAAagttaggca
aaaatattttgaggttttgttCTTGGAAATAGAAGGAACCcatgtgccaa
atatttcaaaccatctgattatccctttaagaacTTTTTGATCTTTCATG
TAGAGAAAATATTGTTATGGAATTGTTGCTTATCTTAACTCCGTTTCTTA
TACATTTTACTTTGTTGACAACTGACGCTATCGTTTCTAGTTTGCTCCCT
TGGAATAGCCAATCTTTgagttttatggtttttgaGTCAATGTATGCCCA
CGCAAATTATAAAATTTACATCACAAGCAATCGAGCTCTATTtcttaaaa
ttcgaaacaaTATTTGTTACTGCATTAGTTATCAACAAAAAGATCGGTGC
ATTTTTACTATTGGTCACTACTTTAACTTGGACTTTACTTTTGTTGCCaa
ggtaaaattattttttcatttaatgtGTTTTTACTAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021306XLOC_021306Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036218-exon-sc0001428-1491911889:24064..24172TCONS_00036218-exon-sc0001428-1491911889:24064..24172Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1510915933:24064..24172TCONS_00036218-exon-sc0001428-1510915933:24064..24172Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1575043694:24064..24172TCONS_00036218-exon-sc0001428-1575043694:24064..24172Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1491911889:26889..26954TCONS_00036218-exon-sc0001428-1491911889:26889..26954Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1510915933:26889..26954TCONS_00036218-exon-sc0001428-1510915933:26889..26954Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1575043694:26889..26954TCONS_00036218-exon-sc0001428-1575043694:26889..26954Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1491911889:27539..27595TCONS_00036218-exon-sc0001428-1491911889:27539..27595Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1510915933:27539..27595TCONS_00036218-exon-sc0001428-1510915933:27539..27595Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1575043694:27539..27595TCONS_00036218-exon-sc0001428-1575043694:27539..27595Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1491911889:28150..28311TCONS_00036218-exon-sc0001428-1491911889:28150..28311Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1510915933:28150..28311TCONS_00036218-exon-sc0001428-1510915933:28150..28311Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1575043694:28150..28311TCONS_00036218-exon-sc0001428-1575043694:28150..28311Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1491911889:28705..28803TCONS_00036218-exon-sc0001428-1491911889:28705..28803Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1510915933:28705..28803TCONS_00036218-exon-sc0001428-1510915933:28705..28803Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1575043694:28705..28803TCONS_00036218-exon-sc0001428-1575043694:28705..28803Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1491911889:28910..28966TCONS_00036218-exon-sc0001428-1491911889:28910..28966Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1510915933:28910..28966TCONS_00036218-exon-sc0001428-1510915933:28910..28966Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1575043694:28910..28966TCONS_00036218-exon-sc0001428-1575043694:28910..28966Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1491911889:29216..31819TCONS_00036218-exon-sc0001428-1491911889:29216..31819Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1510915933:29216..31819TCONS_00036218-exon-sc0001428-1510915933:29216..31819Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1575043694:29216..31819TCONS_00036218-exon-sc0001428-1575043694:29216..31819Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1491911889:32109..32207TCONS_00036218-exon-sc0001428-1491911889:32109..32207Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1510915933:32109..32207TCONS_00036218-exon-sc0001428-1510915933:32109..32207Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1575043694:32109..32207TCONS_00036218-exon-sc0001428-1575043694:32109..32207Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1491911889:33725..35401TCONS_00036218-exon-sc0001428-1491911889:33725..35401Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1510915933:33725..35401TCONS_00036218-exon-sc0001428-1510915933:33725..35401Clytia hemisphaericaexon
TCONS_00036218-exon-sc0001428-1575043694:33725..35401TCONS_00036218-exon-sc0001428-1575043694:33725..35401Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001428supercontigsc0001428:24064..35401 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.93539	1.44526	0.983707	0.363786	16.8474	11.6533	7.63476	6.09502	4.94939	1.23463	1.56968	3.78385	1.97651	3.26465e-08	2.00854	1.25623	0.686774	1.74783	0.166193	0.100019	1.38566	4.21927	1.887	2.34817	4.77989	3.36768	0	0.542187	0.126428	1.84305
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036218 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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