XLOC_021081 (gene) - C. hemisphaerica

Overview
NameXLOC_021081
Unique NameXLOC_021081
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001386:48482..52954-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021081 ID=XLOC_021081|Name=XLOC_021081|organism=Clytia hemisphaerica|type=gene|length=4473bp|location=Sequence derived from alignment at sc0001386:48482..52954- (Clytia hemisphaerica)
CTTGTGTCCTCTCTTCACTCACCTTTATTGACCTTTCTTATTATGGTAGG TGGTAAACAAAATGTGGAGAACAAGACAAAAGAAAAAGCCAAAAAGAATA AAAAGAAAGAACGGCCATCACAAGAAATTAACCCAACAATCGAACCTTTG ATCCAATTAGGAGGTAAAATTCATAATATTCACTTACATTCATTACACAT TGTAAACTGCAGTTTTGAAATACACTTATAAAATACTAACTGATTTCATT ATAAATATTTTTCCGGTTTGTTTATTAACATTTTTGACATTTCAATATTT TAATATTGATTTTTATAGCCCTAAAACTTGAAGAAGATGAAATTGAAGAG AGCCCTAGGGAACCAAATGAAGGTATGATTTTCATTTATCAAAAACTGTA AAGAAAAGTATCAAATTGAAATTTAGAGACTAGACTGGACTTGAAAAAAA TGTTGGTTTGCCGTCAGCCGACAAAACTTGCCGACCTAAAAACTTTTATT GCTATTTTGATAAAAATAATTTCTTTTCTTCAAAAATTACAAAATGTAGA CAAAAATTCCATGAATAACCAAAATAAAAACAATTTTCTGACCGTCTGAC CCACCTCCAAAATGTAGGGTCGGGTGATGGCAAACCAAGAATTTTTGTAA GTCCAGCCCTACTAATAACTTTGAAATTTATACTATAAATAGTTACAATG TCACACAGTTTATTTCTTTTTGACAACAGCACTAAGAACTAAAGTTATTG TTAATTCAGTTTGGAATTAGAAATTGCCGATCTTTCACAATGATGGACTG CTAGTAGACACCCCTTTGTCACAGACCCGCTGGGGCCCCAGCCCCACTGG AAAATTTGGCAAAACTTTCGTCCCCGATGGGAAGAATACCTTAGAATTTC AGCCCCACTGAGAAATTGACTTTGATTTCATCCCCATTCGATATTCATTG TTTAGAAATTGCGCTCCAAAACCATCCCCACTGGATTATTTAACTTTGAA ACAATAGAATTTTTATCCCCATTGACATTTCAATCGAAATTTTTGTTCCC GCGGTAGGAAAAATTTTCACCGGGACTGCGAGATAGGGGTGTAAGTAAAG AGTTCCTCCCTCAGTGTTTTTTTATTACATTTAGATTTGACAGCCAAAGA AAAGAAGAAAAAGAAAAAGAAAAACAAAAAGAAAGCTGCTTCTGATTCCC AAGAACCAGCAATAGGACAATTAATCGATTTAGAAGGTATCAACAGATGT TTTACTCTGTACCAGAGTGTATCTCACGTTTATCGCTTCGTAGTATACTC TGTGCACATTGTCTGTTTGATAAAAAAGTTCCCGTACGGAGACCTCTGCG ATGAAGTATGATTTATAGAGAGCAACACTTCTATCATCGTCTCCCCTCTT GCACCAACACTCCATCGCAGTGGTTGGTTTGAAAAATCTCAAATGAGAAA AGACAATGACAACAGACCTNACTCCATCGCAGTGGTTGGTTTGAAAAATC TCAAATGATAAAAGACAATGACAACAGACCCTCTATGGCAATGAATTTTG AAATCAGCCGTAGATACCGGGTCTATGTACAGACAACAGATGTTTAAAGT TGAGGATAATTTCTTTTCCTCTCATTTTTTGTACTCAATACGTTTGAGCC CAATTTAAGACGTATCAAATAAATGTTTTGACTTTGGAAAAGGTTAACGC CAAAAGATTCGGAAGTTTCACTCAGAATTATGAAGGATTTTTCAGGCCAT AGCTTCAACCTTAATGAAATATTTTTTCTTTGACCTTCAGGCACCTGTGA AGATGAAATTTTCTCTGATTCAGTAAGCATTCTATCTGGTGCAACAAGTA TGAGTAATGATGACTACGAAGATGCTGAACAACCACATCAGAATTCCATC TCGTCAGATTCTGGTAAAACAATTGTTTTGAATGTATTCTTTTTTAAATT CAACTTTACATTGGAAGAAATTTTCGCGGAATTTAATTTCGCGAATTTGG GCGTAATTCGCGAAATTAAGTTCCGCGAAACACACCAAAATGGGTGAACA CGAAACACGAATTCCGCGAAACACGAATATTCTCACAATTAAAAAAATCA CCCCTAAAATTGGTCTTTTTAGGGCAAAATAGGACTTTTCGTAGACAAAT AATTCCCTCAACCGCGAAATTGAATTCCGTGAAACTTTTGAAATCAGCTC ATTCACGAAATTAAATTCCGCGAAATCTGCCATTTTGAAACTGATTCGCG AAATTAAATTCCGCGAAAATTTCTTCTCGCGAAAATTTCTTCCCTTACAA GGTACATTCAGGGAGAGAGAGAAGTACCATCCCTGCATGGGGAACGGGAT TAAGATAAAACCATATTAATGATCATGTTTTCAAATTAAAAGAATTCAAT ATAATAAAGCTAAAAACATAAATTCTAGACATTTGTAATCAAGCCATTCC ATATCAATCGATCAAGAGCAGAGTTTTCACTTTATTTGTTATATTACTTA TACATTGGAGTCTCTTTAACTCGTCTTCTAACTCGTCAAAGTTTTATGGT TTTTAACAATGTCTTATAAACCTTACTCCATAACTCGAAATTTCCTTAAC TCGAAAAAGATTGTGTTACCCGTGCGTGTTCGAGTTATGGAAACTCCACT ATATATTCTTGAATTTTCAGAATCTGAACCTTCAGACGATGATGATGATG GTGATGATGGTGCAAAGAGTGATGGAGGAGGAAGAAGAAGACGTCCTCGG CAACGATCTCGAAGAGGTGGAAGTGACATACATCGTGGTAGAGGCTCGGA ACGTGGCAGAGGGGGTCAAAACCGCGGTAGAGGCGGTCAAAATCGTGGCA GAGGGGCATCTGATGGACCAAGAAGAGGTGGTGGTGGTCCTGCATGTGGA GGCCAGCATAGAGGAAGAGGAAATGATCGGGGAAGAGGTGCCAACCAACA TCTTGGTAGAGGGGGCCTAATAAGACATCAACAGCTTTCCAGTGCTGCTT CGATGCCCTCTTTGAACTATGCAGAATTATCTGAATATTTTGAGCAACAA AGACAATGGCAGGGAGGTTTTGGGGGACCATTCTTTGGGTGATTAATGGG TGATTTGATATTTTATTTGAGTTTTTTGATATAATTTTTTTGATATTTTA TTTGAGTTTTTTGATATAATTTTTTCATGGAAATTGATTTATAAATATAA AAAGTGACATTTTCTCAAGAAATTTGACAATTTCTTTTAGAGGAAAAGGC TTTTTTTGTTGTTATTGTTACTGATTAAGATTCAGGGAGCAAGTGCAAAA ATTGCTAGTGAAAAATACACCATCTAACTAATTTCAAATGAATATTGTAA ATGTTATTTATGTAAGGCGTATACCGAGGCTCTGAATTCCCGAGTTAGAA AACCGATTTGGCAAAAAACCGAGTTATTATGACGTCATCAAACGAAAATT TTGACGTCACAACCAAAATTTCTTGCTTGATTTTTTATTTCCCTAACTCG ATTTTTTTTGTCAAAATAAAATTTTCGAGTTAGCTAACTAGGTTTTTTTT GTCAAATTAAAATTTTCGAGTTAGCTATCTTATACAAAAAAGTGTTGTGT ATCTTTGAAAACTAAACAAAAGCACATTGTTTTTATTTTATTTTAAAAAT CGAATTAGGGAAATAAAAAATCAAGCAAGAAATTTTGCTTGTGACGTCAA AATTTTCGTTTGATGACGTCATAACTCGGTTTTTTGCTAACTCGGTTTTC TAACTCGGTTTTTCTAACTCGGGAATTCCGAGCCTTCGAATGGGTATATC TTACAGTTCTAAATTCAACAATCATATTTAATGAATGGCTTACTTTTGTA TTGGAATATATATGAACATATTTATTATAAAGTCTGTCTCAATAAAATCT GCAGTGGAGACAAAAAAGGAAATAAGTTTTGAAAAAACGCGAATTAAATA GCGGTTTTGTGCTTGTTGAAAAGATATTCGATAGTGATTACCAAATATGG AAAAGACCAAAAGATTTTGGAAAACGAAGATGAAAATGAAGGAGAAAAAA ATCACCCTTTGTAGAATTGTTCAATGATCTTTATTTCATATTAAGGAAAT CTTCAATCTAAGAGGGTTATCTCGATTATAGATTATAATTGAGACAGACT TTAATTACATTTTTCCAGTACTTTTTTAGTTTTTTTATCATCTTAAGCAG TGTTCTAATAGAAATTGTATCTTTTTGCTGGAGTCAAGGCGATGAATTTT TGACTCTGCTGACTGAGATTAGTTTTGAGAGAACGTGTTTTTAGAACAAC ACGCTTACAAATATCTTTTTCATTTTCTTCCATACAAGGCCAATGATAAC GCTCCTGCAGGGTAAGACATGGGGGGGGGGGTACTTAGACAAATGAAAGA TGCAGGTATGTGCTGCCTTTAAGTATGCCCTTTTCAAAGTCCCTCTAATG GTCGTAAAAAAACAAAACATAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00035901TCONS_00035901Clytia hemisphaericatranscript
TCONS_00035900TCONS_00035900Clytia hemisphaericatranscript
TCONS_00035899TCONS_00035899Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00035900-proteinTCONS_00035900-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001386supercontigsc0001386:48482..52954 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.5 14.77 5.98 4.55 14.73 10.34 14.88 17.52 11.47 12.66 12.4 9.88 11.88 11.23 14.06 19.02 12.6 13.23 13.58 16.13 14.14 11.85 22.48 20.81 18.41 21.26 22.22 21.14 15.95 13.91