XLOC_021002 (gene) - C. hemisphaerica

Overview
NameXLOC_021002
Unique NameXLOC_021002
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001363:41436..45259-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021002 ID=XLOC_021002|Name=XLOC_021002|organism=Clytia hemisphaerica|type=gene|length=3824bp|location=Sequence derived from alignment at sc0001363:41436..45259- (Clytia hemisphaerica)
TAGCATGTGGTGTTGTTCCCAGTCCTTTTGATTGTTACCTTGCCAACCGT
GGTGCTAAAACATTGAAAGTGCGCATGCTCCAACATCAAAAGAACGCAAT
GGCCGTTGCTAAGGCTTTAGAAGCTCATCCATTGGTTGAACGTGTTTATT
ACCCAGGTTTGTAAAATTTATGCATTAAACATTTTTCTATTTCTGTAGAC
CAATCATTACAAGCGATTTTAACAAATAAGATGGAACGTTCCAGCAAAAA
GAACGATACTGAACGTTCTAAGATGTTCAGGTGCGTTAGAGGACGTCCTT
GAACGGATCCCCAAATTGACGCTTCTTCCTGGAGGAAACTAGTTTTCGCG
TTTTTTTGGTTTGAAGAAAAATCTAAACCTTCCAAATGTTAAAAGTTTTC
TCGATCTTATTCAGAAATTTAGCGAGTCAGAATAAAAAATTCTCCATCTA
GTACTAAATAAACTCTTGCACCGCAAAATAGGTTACGCGAAAAGAAATTC
CGCGAAAATAAGTTGTTCCCTTATTAGTATAACAAAATGAATACCTTGCC
TTTTCTTTAGGATTGAAGAGCCATCCAGCTCATGAATTGGTCAAACGACA
ATGCACTGGCTTCAGTGGTATGGTTTCCATGGTCATCAAAGGAAATTTGG
AAACCGCTTCCAATTTCATGAAAGCATTAAAGGTATGAAGAAAGGGTTAA
ATAATCTCCAGGCCAAAAGATTTATTTATGATTTACGAATCATTCTGATT
TTGTGCTATTTTCAAAGTTTTGAGCTCCCCTAAAGGCCTATAATTTCACG
AAATGATATTTTACTATGAGTCTATCAAAATTTTCTAGATACAGTTTGGT
TAGTAAATAGACTGATGAAACGCCATTGCGAACTTTCACTCGATGAATCT
TTTGAAAATAGTTTCCTTTAGGAAATCGTTTGACCTTTGGTTTACTTTGA
TGGTATAAAATTTCGAAGCTGCGAAATGTTATACCATTAAAGTATGATAC
ATAGGGAATTTTTCAATCCTCCCATTTTTACGTAACGATTGAAATCCTCA
AACATTTTCTAGTACAATTATGTGGGTTTAGTGACTGTAGACCTTAACCT
TTTAGATTTTTTTCAATATTTTGTTCACCTATATTTCAGGTGTTCACTTT
GGCCGAAAGTTTGGGAGGATTTGAGAGCTTAATCGAGCACCCGTAAGTAA
AGTGTCAATTTCTCCCAAGAATCACCTATCTTTAATTTTCACTCTATTAC
GAAGACTAACTATGCTCCATTCCAATTATATCCCTTGCCTTTTTGTAACA
CTTAACAAAATACAATCTACGCGATACTTAATAACTCTTAGTAAATTTCG
TGGTTACACATTTTTTTCAAAAGGATACTAGCCAGTTTTGGCTGAAGAAT
AGCTGTTCTTTTTTTTCGTAATTTCTAGGCTTAAAGGTTCTTAAAATGTT
TTTAATAAGCTTACTATATTGATTTATTGAGACTTGAAAAAGCTTTCTTA
GCGATTGCTAAATCTTTGTTCTTCGAATTTGAGCCTCATGATGTTCTTAT
AAAATCGTACCCATAGAATTGTTTTTATAAAATAGCGTGTAATTACAGGT
ATCTATATAATAATAGCCGTACGTGTCTGAATCCCTTTTTGCAGCGCTTT
TGTTTTCGATAGCGGTTTTAGCTTGGGACGTCACAAAATTAATTGCAAAA
TAGAGAAAAAAACAGGATTTCGTCAGTCATCATGTACATTCTACGATAAA
AGATAATAAGCAACGGATTTGAAGGCCCTAAATGTGAAACTGATAATTTT
GCATCGAAGGATAAAGTTAACTTCACACCTGAGATGGCTATTTTTATAGT
GACAAAGTCTTCTTTGACGACGTCTGGGACCGCTATTTAACAAAATGAGT
TGATTTTTCTTCTAGCGCTATTATGACCCACGCTTCAGTTCCAGAAGATC
AACGAACAAAACTCGGAATTACTGATACTTTCGTATGTTAATTTTTCCAT
TTCTTTTATTTAAAATATCTCACTCTAAAGGAGCTAAGATTTTTTGGGTT
AGATTTCCTTGTTATTCATTGCAAGGTCACACGTTTTTAACTTTCTGTTC
ATACTGCAGTATAATTTTATTCATTCGTTTTCAAGAAATATAAATCAGAT
TTTCATGACTTTCATGGTAAATTCCGTTGAAAAGGAACTTAAAGGTTTGT
ATAGTTTAAACACAACCTCGTCACCGTGTATCCCAGGCTTTATTTATGTT
ACTGATGGACGTGTGTAGCGCTAACAGTAAGCATAAAAAGCTGATACTAC
GCAGGGGACGAGGTTGGTTTAAACATAGATGTTGTTACGCAAATTTATTC
ATTCTTTTTTTAAGTTGAGAATGTCAGTTGGGCTAGAAGAAGCAGAAGAC
CTCGTCGCTGATATTGAACAAGCTTTAGCTGCTGCAAACGTAAGTGTTAA
ATCGTCTCCTTAATTGTTCTCTTCAGGTTAAGGCCATGTTTACACGTTAC
TTTTCCGTCTCGCTCTGAAACGAAATGAAACCATCCTATTGGTTAAATTC
AATTGTCATTTCTAACCAATAGAATGGCTTTATTTCGTTTCTGAGTGGAA
CGGAGCCGTTGTCTGCCAACATGGTCTAATTAACTTAAAGTCACTATACG
AATACGAATACGTCAGTGTTCGGTACAATTGACGCTTTCTAATTTGATTT
TCAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTT
TCCCCCCCCCCCCCCCCCAATACATTGAACGTATGTAGACGCAAATCAAG
TTATAAGCTATCAAGTTTGAACAGAAGAAAACCATACGATTCTTGCTTAA
TTATTTACTCATTCATTAACTCGTTCATTCATCCATTCATTCATTCATTC
ATTCATTCATCCATTCAGTCTGAAGATCCCCCAAGCAAACGACAAAAGAT
TGCATAAACAAAACACGCACACACACTTCTTATAATAAACAGGTACTCTC
CCTCCCACCCTGACTGTCACTCCTTTTAGTAGGTCACAGAAAAATGAGAA
AATGAGAAAATATACATGAGAGAGATATACATTTTTTGTCATTTCCAGTC
AATGTTGAAGCCAATTTTTCAAAAAAAGTCCTAATCTTTTTTTTACGTAA
AAATGAATTTGAGGATTCTCTTTAAAAAAAGATTGAAAACTCGAAGAGCT
GTTACAATCTGCTCTCTTCTTTCGCAGAGGGGGGACTGAAAAAATATGTT
GTAGTTTAATTTTTTTCTTTTTTTCTTATCATTCTCAGAATTAATTTTGG
GTGACGGTATGTAATTTTTTTGGTGTTGACGAAAAAAAATGACTGAATTT
TATTTATAAAATGGACATGTCTAATTTTATTTTTTAGAAAAAGAAAAATC
TATTTTATTTTGTTATTTATATCAGCAATTAAAAATCAACCAAAAATATT
GTAGGTATTTTTCAGTTGATGATTTGTTTTTTATGAAAGTAAGTTTGAAA
AATTCGGTTTCAGGTTTATGTTTTAAAATTTGCTTTTTGAGGGACATCTT
TTACTATTGAAGGATTATTTTCCCTGTTTTTTTTATTTCTAAATTCTCCT
TTTCAATTTAGAAACCTTTCACACTTAAGAACCATGATACTAATTTTTAG
GGATTTCTAGATTTTTAAAGAATAATAAAATTGATAAAAATTGAAAGATA
AAGATCTAATAGTGACATTGCAAAAAAAGTCTTTTTTTCTGTTTGAAATC
ATCCCCATTTAATTTTTTTTTCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00035793TCONS_00035793Clytia hemisphaericatranscript
TCONS_00035792TCONS_00035792Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00035793-proteinTCONS_00035793-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001363supercontigsc0001363:41436..45259 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
166.49	161.98	207.39	215.95	19.23	16.35	66.92	75.14	302.05	198.4	203.25	303.46	213.95	215.21	174.6	149.75	196.22	206.85	40.91	37.08	260.88	265.08	109.96	119.38	94.38	141.43	212	223.56	41.2	44.57