XLOC_020926 (gene) - C. hemisphaerica

Overview
NameXLOC_020926
Unique NameXLOC_020926
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001353:2979..10445+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020926 ID=XLOC_020926|Name=XLOC_020926|organism=Clytia hemisphaerica|type=gene|length=7467bp|location=Sequence derived from alignment at sc0001353:2979..10445+ (Clytia hemisphaerica)
TTTGACCACGGATAAATTCGATTTGGTCTCGATTGTTCAAAAAACTTTCC
AAGCAACCCCAAACAAATCAACATGGCTTCCCGTTTTTGTTCGATTTTGG
GACTTCTTGTCAACATTGTATGATATTTCTTTAATCCATCTTATAATATT
TAATAGAAGAGGTAGGTTTTTTAACCCTTCAAATGGGAGAGGGTTAGCTA
TATGGGGGATATATGTTGTACTTTTTCAATGTGAACATAAACAAAGAACC
AGAGGGAAATTAGTGCGTCTTCTTCTTTTCAGGCCCTCTTTCAGAACTTT
TATGTATGGTacagaatagacctttttttaaagaggcagccatattgaat
aattatgtactccagcataaaaacaatgatacagccatgcataattactg
tatcatgcatattttaaaaattatgcatgggctgtatcattgtttttatg
ctggagtacataattattcaacatggctgcctctccAGTGTGAAATCCAT
GCAAAAGCCACACCGAAGATATTTTGAGGATCAAGAAGGTTACACCCAAT
TAAGGGCATTCTCACGCCGAATATATTTGGCGTACTGTGTATGAATTCCA
GactggctgcctctttaaaaaaaggtctatctatCACCTATAGTACCATT
GTCCAGTGGAATGATTTACAACAGAATTTTCCTGCTTATccctatttttt
ctttttcttttttcttttttgtctatTTCATTTGTgtatcttttctattt
tttgataattttaagtttagttttctactttttgttctcctccttcattt
ttatttgtctGTTTTAAGACTTTTACGTATTCAGTAGTTTAAGAAATTNT
TCTACTTTTTGTTCTCCtccttcatttttatttgtctGTTTTAAGACTTT
TACGTGTTCAGTAGTTTAAGAAATTCTTCCTAATTATACTACTATTCCTT
GGAATTTCAAAAAGGTGGCCCATCTCGAATAGCTTGCTAATATGAGGTCT
CCATTCTAGCATTGTTTAGTTTTATTATATCATTGAACATAaaactttgt
atcatatttactactacaatcatgaaaaataaaatactactactactact
actactgtGATGAGATAGACCCTTTTTTAGTATGGTATTATGGGATTTGA
CGAAATAGAGACAGGAAACTGGTACCGTGAAGTCggcgggtaacttgcat
cagtggggAGGCTAACatgatgcatagccctcaaatgactgaccaattaa
agcagcaaaatttcaaaacaaatcaactacgcagctccgctcgcagctca
caagtgttacgcgtaagccaaatcgcgtattacgaacaacctctaaattg
ccgagtacaggagaaaaaaaatcaaaattcaaaatggcggccaagaccac
cctgataactatcaaaaatcttcgtttttcaatcagctattgcagctcaa
taaatcaatgaaataatttgaaatNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNttcaaaataaaacgatttccaaaccaacctaaagtcag
tgtctgccaactaaaaatttctctgcggggtcactggcaaggagttacga
cttcagacttcagattccaattcttgtataggctgcaaccacactgccaa
atgatctgtattacaaagacttcccaatgggtccataagttgagaaaatg
agattatcatctagcacgggggttttgtttttaaaaacaaacttcaaaat
aaaattgttaccTAATGAACttcttacttaaaatatcacttacttacata
atttatttatgatataacacccctttcttaaataaatgggctcttaaagt
cttttatgtttgccgcatgaagggagaaaaatttaatttgacccccagtt
ttttctctcttttgcTAGCTagttcccgcgtgttagtgtagacacaactt
taatccagtggaaatgaagcgttttcattggtctaaaatcacggatggtc
acgtgaccagaattattatccagggaaatgccgtggcggcaatgttttgc
tttagtgagattgaccattttgttgtttagatttgagcgatttctgtaca
aaccaaaatatggcttcgttggaataccggttgaaacacttgtcagctct
actctaccatttttgttttgatttaactttgtattttaatgacaagaccg
gtcattcatttgagggctatgcatgttagcctccactgatgcaagttacc
cgacttcacggtataccgtcaactgctctaacttgggactgtCTCTTACT
TTGTAAAATAATTCGGAGTAGAATCCGAAACATCCAAGTTTGCACTAGAC
AGGTAACCcatcctgtatttttataatctgatacaGGACAGGTACGAGCT
GTGAagcagatttctgcctcaaaaaacTTACAGTGGAAAATTCAaatcct
cacttactaaaataaaaaccaaattttggaacttgcgctttctctgagaa
agtgtgaccagtaaaatattaacaaaatttgattggcaatgttttcaacc
gtcattaggatctaggaaattcaaactctcagcccgaaccatgctatata
ttttgccatcagtatataaaataagaaatcatagcatggatctccagtct
aagtttgcacggaagcacttgaaaaaaacgtttttgcAAAAAANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNtttggggggggggggcaaagtCAGAGATCATGTAGGGCAT
CCAACCCTTTTGCACATTGTGAAATTATGATTTAATGAATAGCTTTCAAG
GTAAACTGACTTGTTTACTGAAATGCTTAGAGTTCACTTAAAACCTGCTT
GTAAGccattttcttgattttatagatatattgaacaaaaaaaaaatgtt
gggAAGTGAAGGAGAAGAGGTAGAGGAGCAATATTTGTTGAATCTGCAAG
AATTTGTGGAAGTTGTTCAACCTCAAATGAAAGAGCTGGAAGCCCTCACT
CAAGTGGAAGAGTTTGTATCCAGTCTGGAATCAACTGATCCGAACTTCCA
TCGCTATGGTTTCATTTCTCAAATGAAAGATTCTTTGGACACAGAACTGA
CACCTTTGATTGATCAAATGTTACTGGATGGAAAAGAAGCTGACAATGAA
GACCATTTAAAAGCAAATAGAAGTTCAGAACTGATGAAAACTGAAGAATT
CCAAAACATTTCATCACATATTCTGAAATCAGTACAAGCAGCTGCTTCTA
AGATTACAGATCATTTAAATTCTGACACTTTTGACTTTTCGGGTCCGTTT
CATAAATTCAAGTCAAgtaatgattattttaatgCCAGTCAATCTGACTG
TTCCACTGCGGATGGAATGGAGTTCATGTTTATGTCACCAGACCGTTACA
AAACATTGGCCCAAGATATTTCTCCATCAAGACCCATTGAACAACGTCTG
AAAGCTCTTTCAATTTTGCAGCATCTACCTCAAGGTGATTTGGTTGCGAG
TGAAGCATGGCAGCTGACCAAAGAAGGGATCCACAAAGCACTAAATGATT
ATGATGAGGAGATCAATCAAAAAGCGCTGAAACttttatccaaaatattt
gTGAGTGGTAACAGTCATGTCATTAGAGAATACTTTTTATTGTTGGTCGA
AAATTTGTCAGACTATTTCAATGATAGTACGTCACATATGGTTTCACTTA
ATGGTGGACTGGACCTTGGTGATCGTAGAAATGTTTTACTTCTAAAAAAA
TTCCGCCTCCTTAATGAGATTCAGAAGGAACTACCTAAAACATGGCTACG
CTATTCAGAGCGGTATATTGAGGAGATGATTGAAGCAATGGTCCACTTAC
TAGGGATCTCTCCATCCAGAATGGGAGGAGGGAACGAGTGCACTTTATTG
AATCCTTATCATTTCCTGTGCATGGTTGATCCACATGGTGTTTGGTTTAA
AAAATGGATCCATGGTTTTTACAGTCGTTCGCACCTTCTAAACTCGATTC
ATAACCATATGTCTTTCTTGAAAAGATCGATAAAGAGTTGCATTGAAGTT
TGCCGCAAACTGCACCATAATAACGAACAGGTCACACCAAATGATGAATC
TTCAGATTCTATGATTTTTGATCagttttatattttgtacattcaATTTA
TACATTCAGTCAATATTCTTGTNTCACACCAAATGATGAATCTTCAGATT
CTATGATTTTTGATCagttttatattttgtacattcaATTTATACATTCA
GTCAATATTCTTGTACGGCTAATGCAGTTCAAGAAAGGCCGAAGTTTACT
TCACTTTGAGCTAAACAATGGGAAGTTTTTGGACATTGGTATGCTATTTG
TTGCACTTGTCGATGTTGTTAAATTACACCCAAGCAAACATCTCAAATCA
CAATACCATGGTGGACAGCTGATACTGGATGGCTTCAAAACATTATGTAA
CATCGATAATGAGACGATTAAGGATTGTTTTTGCTGGGGAAGCATCTACC
AATCCATCATACATGGCTTCGAACAGAACGTTCAATCGATTCCTCAACTC
TTGGAAATACTGTCTGAACTCGCTGGTAATGCACTTGGTTGTGAACAACT
GCTCATACCACGGACAAGCAGCAAGTATGAAAAGAAGCTTTCCTTGATTG
AGTTTCTTGCGGAAATTTATATTCAAAATGGAGGGAGAGATCTTGAAACA
TCTCTTGTTCCAACCTTCATGAAATTATTGAGACAGTTGTTTAAAAATTC
TGATTGTGTGGTTTTGCTTTCAAAATACAATTTGAAGCAATTTTTTTATC
AGCTTTATATCAAACAACAAGGTGAATCAGCAGAATTATTGGAAAAATAC
AACAAACTAGTTAGCAATAGAGCACCAACATCCAGCACTGGATCAGGGTC
AGCAAGGAGAAGTGCTGAGAGTCAAGCCTATAAAAAATCTCTCCAAACAG
AGCAACAAATCTTCGAAACTATTCTTTGTCTGAACCTCACATCCAAAGgt
gttattttattttttcactctGACATTATCGATGCTTGTGTGTCCTATTT
TGGGAAATGTTTGCAAGAAAACAACCGAACAGCTAACAATCGGTATGGCT
ACATTATGGCTAAAGTGGCTTCCAATACTAAAGGATGTCAAGCTCTCGTC
AAGGCGGGTGAgtcatcaaaacatttttcccGCCATTTTCAGTCCATAAT
AAGTGCGATAAGATTGATATTTCTATGCAAACCAATTCCATCTGTAAGAA
CCAATAAACACTGCTGGTTGAGCCAGGNGCTGGTTGAGCTTcggttgttg
ttttttctttataaggctgacttaaaaaactttaaaagctCTTCCTTGTA
TTTTTGCTTTCACTTGAGAGCTTAAAAGGGACTTctttttaggcgtacaa
actttcgccaGCAGAATTTTTCGCGATTTCGAGAAATAGGGCTtgtattt
tataaatgaaacatgCTTTTCAGGTTACGATGAGCATATTTTGAGCGACA
TTTGGTTCCACTTGGAAGGGTGCACAAACGATTACACTTTAACTGTTCTC
GATAACGAGCCCGAAGATTTATCAGACCGCTTATCCAAAGAACTTTTCTA
CAAGTTGTGTGAAATTCTACCCAACTTTCAATCAGCTCAAGTCATGTTAG
AAGACTCAAAGAAACTTCAGAAACANCCAAAGAACTTTTCTACAAGTTGT
GTGAAATTCTACCCAACTTTCAATCAGCTCAAGTCATGTTAGAAGACTCA
AAGAAACTTCAGAAACAAGATGAACCTGTATGTCTAGATGAATTTATCAA
GTATACAGTTCTATATCGATTCCCCTCCGGTACACGTCTATTTCGCCCGG
AGCAGACTCACTTTTTTGGATTATCTTTCATGAATTACGTAGTTGCTTCA
TTAGATGTCATGCTGTTTTTACAATCAAAATATGATTTCAAAGATGTGTT
TTTCAAAATGCAACAAGATTGTTATTCATCCGAACATAATGCTTACATTC
TCGACCAGAATTGCATCAAACGAAATGAGATCTTGGTGCAAACATCCATC
CTCGGTGGTCCCGATGAACGGAAAATGCCTTCACCATCTCTTTCAACCGT
AAGTCTCCTCATCAATTACCAATATTGTATATTTTCTCCTGAAATTGTCA
AAATTAGTTAGTTaagtttttgattaaaaaaccAAAGTTGGATTTTTCTT
TGTACAAACAGACCGTGCGTTCAAATCAAATCTCTAAAAGCAGGTATTGT
CAAAAGATTGATAAGCATAAGTTTGTGTATTTCTAGGATTGtcatttaat
tttctttgatcGATTTTTTTTACATGATCTTTTCGTCTTGCAGGAGAACA
CGTACAACTACCCACTTTTCTCATCACAACCTGTTCCAGctgtttatttt
caaaagcaAAAGCATTCTTCGCCTTCGAAACAACACAATAACAAGGCAGC
TTTCACTCAATTATCGAACGTTTTGAAAGGTGGTGGTGAGGAAGAGCTCA
AGAAATGTTTTCTGGAAGCACTTCGTAGCCCCTCCTTTAAGGTAAGTTGT
TGAACTAAATTCATGCATGTTTCTTtgtaagcataacgcttataagcatc
tgaaggctcagatttgcagattttctaagcataacataagcatatatgtg
AGCCTGAAATATTGAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00035696TCONS_00035696Clytia hemisphaericatranscript
TCONS_00035697TCONS_00035697Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00035697-proteinTCONS_00035697-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001353supercontigsc0001353:2979..10445 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.28	10.82	6.8	4.87	12.81	8.9	7.3	6.96	4.12	6.27	6.36	4.24	2.56	2.55	2.31	3.82	2.99	3.18	3.06	2.57	3.24	3.41	7.58	6.85	5.38	5.98	5.19	5.33	4.81	5.21