TCONS_00035697-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00035697-protein
Unique Name	TCONS_00035697-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	493

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00035697-protein ID=TCONS_00035697-protein|Name=TCONS_00035697-protein|organism=Clytia hemisphaerica|type=polypeptide|length=493bp
DKFDLVSIVQKTFQATPNKSTWLPVFVRFWDFLSTLYDISLIHLIIFNRR
DILNKKKMLGSEGEEVEEQYLLNLQEFVEVVQPQMKELEALTQVEEFVSS
LESTDPNFHRYGFISQMKDSLDTELTPLIDQMLLDGKEADNEDHLKANRS
SELMKTEEFQNISSHILKSVQAAASKITDHLNSDTFDFSGPFHKFKSSND
YFNASQSDCSTADGMEFMFMSPDRYKTLAQDISPSRPIEQRLKALSILQH
LPQGDLVASEAWQLTKEGIHKALNDYDEEINQKALKLLSKIFVSGNSHVI
REYFLLLVENLSDYFNDSTSHMVSLNGGLDLGDRRNVLLLKKFRLLNEIQ
KELPKTWLRYSERYIEEMIEAMVHLLGISPSRMGGGNECTLLNPYHFLCM
VDPHGVWFKKWIHGFYSRSHLLNSIHNHMSFLKRSIKSCIEVCRKLHHNN
EQVTPNDESSDSMIFDQFYILYIQFIHSVNILXSHQMMNLQIL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_020926	XLOC_020926	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00035697	TCONS_00035697	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032735	BROMI
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032735	Protein broad-minded	PFAM	PF14961	BROMI	coord: 74..483 e-value: 6.3E-64 score: 216.0
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 84..456 e-value: 5.0E-6 score: 24.8
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 168..181 coord: 221..372 coord: 72..140

Blast

[Close]

BLAST of TCONS_00035697-protein vs. Swiss-Prot (Human)
Match: BROMI (Protein broad-minded OS=Homo sapiens GN=TBC1D32 PE=2 SV=4)

HSP 1 Score: 157.147 bits (396), Expect = 6.279e-41
Identity = 117/437 (26.77%), Postives = 210/437 (48.05%), Query Frame = 0

Query:   67 EEQYLLN--LQEFVEVVQPQMKELEALTQVEEFVSSLESTDPNFHRYGFISQMKDSLDTELTPLIDQMLLDGKEADNE------DHLKANRSSELMKTEEFQNISSHILKSVQAAASKITDHLNSDTF---DFSGPFHKFKS-SNDYFNASQSDCSTADGMEFMFMSPDRYKTLAQDISPSRPIEQRLKALSILQHLPQGDLVASEAWQLTKEGIHKALNDYDEEINQKALKLLSKIFVSGNSHVIREYFLLLVENLSDYFNDSTSHMVSLNGGLDLGDRRNVLLLKKFRLLNEIQKELPKTWLRYSERYIEEMIEAMVHLLGISPSRMGGGNECTLLNPYHFLCMVDPHGVWFKKWIHGFYSRSHLLNSIHN-HMSFLKRSIKSCI---EVCRKLHHNNEQVTPNDESSDSMIFDQFYIL-----YIQFIHSVNIL 482
            E+Q +L   L+   + V+ ++    +L   EE +  LE TD NFH Y F+  ++  +   L  +I++ +       N+      D +    +    +++E++ +  ++   + A    + +    D     +      K KS S    N S SD S     +F      + + +   + P +P E R +AL  L   P  D++  E W    E +  +L+D D   + + LK  ++ F+    H+ +E +  L + L  YF    +H+ +L+ G+D+ +     LLKK RLLNE QKE P  W+R+ E+Y+EE++E+ + LL +  ++    ++  +L+P +F  +VD   VWFKKW+H  YSR+ +L  +   + S +  +I+ C+   E+C K    +E +  +    +      FY L     YI FIHS+ +L
Sbjct:    7 EDQAMLQAMLRRLFQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLRQHIGNTLGSMIEEEMEKCTSDRNQGEECGYDTVVQQVTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQKKIQKEKSHSYRTDNCSDSDSSLNQSYKF---CQGKLQLILDQLDPGQPKEVRYEALQTLCSAPPSDVLNCENWTTLCEKLTVSLSDPDPVFSDRILKFCAQTFLLSPLHMTKEIYTSLAKYLESYFLSRENHIPTLSAGVDITNPNMTRLLKKVRLLNEYQKEAPSFWIRHPEKYMEEIVESTLSLLTVKHNQSHVVSQ-KILDPIYFFALVDTKAVWFKKWMHAHYSRTTVLRLLETKYKSLVTTAIQQCVQYFEMC-KTRKADETLGHSKHCRNKQ--KTFYYLGQELQYIYFIHSLCLL 436

The following BLAST results are available for this feature:

BLAST of TCONS_00035697-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00035697-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
BROMI	6.279e-41	26.77	Protein broad-minded OS=Homo sapiens GN=TBC1D32 PE...	[more]

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TCONS_00035697-protein (polypeptide) - C. hemisphaerica