XLOC_020834 (gene) - C. hemisphaerica

Overview


Name	XLOC_020834
Unique Name	XLOC_020834
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0001335:45395..50940-

gene from alignment at sc0001335:45395..50940-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_020834 ID=XLOC_020834|Name=XLOC_020834|organism=Clytia hemisphaerica|type=gene|length=5546bp|location=Sequence derived from alignment at sc0001335:45395..50940- (Clytia hemisphaerica)
AAAATATATGGGACTTTTTTGAAATCCACACTATTCTTTAGAAAAACCCT
TCTCCCCAGTCTACAAAGCTGGTCCTGTGCAGAGGCAAAACAACCACCAC
AGCTTTGTAAACAGGGGGGAGGATTTTCACTTGTTTTGAGCTCAACTAGA
TAGAAAAAGTCTCATTATATTATGCACAAGATTGTCTGAATTTTTAAAAA
AAAATTTGAAAGAGCTTTCCCCACCACATGCGAAAATTTTCTTTTTTAAA
TGGCTATCATGGCTTCTTCCCGCCAGAAAAAAGCCGTGTGCTTGCATAGC
AACAAAATTAGAGTCCCTAGCAACAAGATGGCAGACTAAAAATGGCGGGA
AAAAATGTAAACAAAGGGTAATCTGATCCTTTCTCAGGGGGGAGTGGCAA
TTTTACAACCCTTTCACACATTTAAAAAGTAAGCAAAGAGTAATCTGATC
TTTTCTGAAGAGGTAGTGCCAATTTTACAAACCTTTTACANGTAATCTGA
TCCTTTCTCAGGGGGGAGTGGCAATTTTACAACCCTTTCACACATTTAAA
AAGTAAGCAAAGAGTAATCTGATCTTTTCTGAAGAGGTAGTGCCAATTTT
ACAATCCTTTTACAAATAAAACAATTTCAATAAATTTCTCTGTATTTGTA
ACTAAAAATTACAAATGGATGACACAAGTGATTTATCGCAATGCGTGGTC
AACTTAAACGCCTCTACCCCTGTACCGAACCGACACCTTGAATCGTATGA
TGCTGCCCTTGGACGAGACAGTGATTCCCAGGTTTCCACAACATCAGCGC
AAGGTCTAGACACTACAATCAGGGACAAAATATTTGGCACAAAAAGGAAA
TTCACCGGGGTGTTTTGAAACCACAATCGATTTGTAAGTGCTCTAAAGTA
GGTCCGAAGGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
TTTTAGGGGCTAAAACTTGAAAAAAAGTCAAAATTTTCTGAAATTTTCAC
GTTTTTGACTTTTCGTAAATTGGACCTTTTCAAAAAGTTAAATATTTCAC
AAGAAATTGATTTTGACCTAATGAAAATGCCTCAAAATGGTCGGAAAAGG
GCTATTTTTCACATTTTTGGCGTTTTCTCCTAATTTTAGACCCCCAGCAG
AGCAGAAATCGGCATTTTTTATTTTCAAAGACAATCAGGGACAAAATATT
TGGCACAAAAAGGAAATTCACCGGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNAGTAATCTGATCTTTTCTGAAGAGGTAGTG
CCAATTTTACAAACCTTTTACAAATAAAAAAATTTCAATAAATTGCTCTG
TATTTGTAACTAAAAATTACAAATGGATGACACAAGTGATTTATCGCAAT
GCGTGGTCAACTTAAACGCCTCTACCCCTGTACCAAACCGAGACCTTGAA
TCGTATGATGCTGCCCTTGGACGAGACAGTGATTCCCAGGTTTCCACAAC
ATCAGCACAAGGTCTAGACACTAGCGCCACTGCAAGAAGTTCCCGTTCCA
AGAAACCAAACAAAACAAAAGGCAAAGGTGAAAATAGCAATAAAAACAAA
AAGAAAAACCCACGTGAAGCATACTTGATTACGTACTCTCAGGCTGATGT
TGTGAAAGTCCCGGGACGCGAGCACTTTGCCAATATGGTGGTCCAAGAAT
TTGACAGAAATGATTCTGTTTCAGAGAAGTGGGTTGTATCAGCAGAATTG
CACCGAAATCATGGCATTCACTACCACCTCGCTTTGAAATTAAAGAAACC
ACGACGGTTTAAGGAAGTTCGCAATGCAATCAAAAATAAATATGACATTG
ATCTTGACTTTCAAGAATGGCATAGTAATTATCATGATGCCTTTTCATAT
GTTGTTAAGTTTGATTCCCACTATGTAACAAGTCCTAGACACGTTATTTT
GTCAAACCCACCCAGAACAACAAAGGCAACAGAGGCTAAGCGTGCCCAAG
CTCAACATAGTAGTGAAGCACCTCCAAAGCGCAAGAAGAGTAATTTGCCA
CCCAAGTTAGGCCGGGAAGATGTGGGAAATATCATCCGAGAAAATGGTAT
CAAGTCGGTTAAAGAACTGTTCTCTCTAGCCCATGCCCAAGCAAAGGAGG
GTAAAACTGATTTGAGAGGGTATCTTTATACTCATCCTGACCAAAGTTTT
ATGACCAAGCAAATTTCAACGGTAGTAGGTATAGAACTGGTTGAGGATGA
GGCAATCCGTGACAATATGTCAAGGCTTGACATTTTACGTCAAGCAAAAG
ATGGTGAGTGCGCTAAACATCCTGTCACTAGGGAACTATGCAACGGTCTT
TGGCTTTCTAGTGCATTGGAGGTGCTACGTTTGAACGATATATCACGCGG
TAGGTTTACAGAGCTTGTATTGAACGCCCTGTGNTGCTACGTTTGAATGA
AATATCACGCGGTAGGTTTACAGAGCTTGTATTGAACGCCCTGTGGTATG
GCAGAAGCAAAGGCTATAATCTGATGATATGTGGAAAAAGTAATTGTGCT
AAGTCCTTTATGTTAATGCCGTTGATTGAAATTTTTGATTGTTTTATGAC
ACCGTCACCCGGAAATTATAACTGGGTGGGTGCTCCTGAGAAAGAAATTG
TTTTCTTGAACGATTTAAGGTATGAAAAGGATGGGGAACAAAAGGTAATG
GCATGGAATCTTTTTCTAAATCTTCTCGAAGGTTTCCCTGTCAATATGCC
AGGCCTAAAAATCGATTTTCAACGGACCTCCTTTGGACAAAAAGACAACC
CATTTTTGCAACTGCTGAGAAGAAAATTGTTCGAATTGTTAGCGGAGAAT
TTGATGAGGGAGAAACCAACCAAATGGACATGCGGTGGAATATTTTAAAC
TTCAAGCATGTATTTGACCGGGATGCTGCCAATTATAACATTACTCCTTG
TGGGGCTTGTTTTGCTAAACTCTTGCTTGACGCATAATTCACTTCTATTG
CTTGACCCATAATTAATTTTGCATATTATCGTGTTTTTATAATTTTACAA
AACTATTGCGTTTTTTTATAATTTCCCTAAACAGTCGTGTCTTTTATAAT
TTTCACAAAACTATGGCGTTTTCTTATAGTTTCCTGAAAGGGTCGTGTCT
TTTATAATTTTCCTAAAGTTCCGCGTTTTCTTATAATTTCCCTAAACAGT
CGTGTCTTTTATAATTTTTCAAAACTTCAGCGTTTTCTTATAATTT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00035585	TCONS_00035585	Clytia hemisphaerica	transcript
TCONS_00035584	TCONS_00035584	Clytia hemisphaerica	transcript
TCONS_00035583	TCONS_00035583	Clytia hemisphaerica	transcript
TCONS_00035582	TCONS_00035582	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00035585-protein	TCONS_00035585-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0001335	supercontig	sc0001335:45395..50940 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.3	8.79	5.29	5.68	46.05	34.98	19.47	22.67	11.03	13.87	12.35	13.13	6.56	6.69	5.89	5.2	5.9	4.39	3.3	2.81	6.38	5.16	5.04	6.16	22.1	25.41	2.22	2.16	1.61	1.44

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XLOC_020834 (gene) - C. hemisphaerica