XLOC_020729 (gene) - C. hemisphaerica

Overview
NameXLOC_020729
Unique NameXLOC_020729
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001314:38389..45009-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020729 ID=XLOC_020729|Name=XLOC_020729|organism=Clytia hemisphaerica|type=gene|length=6621bp|location=Sequence derived from alignment at sc0001314:38389..45009- (Clytia hemisphaerica)
TAATATAGCTGTAACATATAACATATGTAATATAGGTCGCCTAAATGTAG CCTTATATGGAGACCTAGCCAAATTTTGTCTTTTTGTTTTGAAGAAAAAA AGAGAGAAAAAGAAGGAAAACTCTTTCTTCCTTTGTGAAGTACATGTTCG ACTGATGAAGACTGGATATCACGTAAGTATTTTTGTATTCTTCTGTGGTT TCAGAGCACTTCTTGTTTGTAGGTAGCTAGGTCGGATTATGAAGCTAACT TTGTTGATATTTACAAGTCAAGAGTGGACCTTGCCTTGATCTGTTTGTCA TTTATATAGACCTTTTTTTAAAGAGGCAGCCATGTTGAATAATTATGTAC TCCAGCATAAAAACAATGATACAGCCATGCATAATTATTGTATCTTGCAT NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATGAT TTTTCCATAGAACATAGTAAAACTATTCAGGAACTTAGACCTTTTTACAG AATTTCAAAAAATCTGTTAGTTCTGGAGATATATTGAAAAGTTTAGACAG GGGTAGTTTGCGTTCGTGTTCCGCGTTCCCAAACCAAACGCACGTGGCCA CTTCTCTCCTAAAGGGCTTTGGGATATCTAAATACTGAAACAACTTACAA GTATCTTTCAAATGCAGCAAAGTTGCTGGAGAAAGTTTTTGTACCTCCTC TTCAATACAACCAGGCAATTTTTGTTTGACAGGAAATGCTGGAAGGCAGT CTTTTGATATTTCCTCTGGAGTTCTTTCAAACTTTATATAATTTTTAATT TTAAAGACGTATAAAAAGCAGACCAGATAAAAACAGAGGGAATCTATTTT GCAGACCGTCAAGTAGAAAGTTTCAAATAGGAACGCGTCAAGTTGGGATA CATCGATTTGAAATGTTTCAAATTGAAATGTATCGATCTGGAATACATCA AGTTGGAATGCATCAAGTCGGAATACATCAAGTTGTAATGCGTTAAGTCG GAATACACCGATTTGAAATACTTCAAGTTGATATATCAGAATATCGACTT GAAATGCGCTATTCCAAAACAAAAACTGAATTTCAATCTGGCGTTCTGCA TTTCCAATTCGCCCATACAATTTTGTCCAGTTTATGACGCCATAGGTGAG GCAACCTTTTTTTCCGATGTGCTCTGAGAGTATATTTCAGCTAGAAACTT TGATCTGTTTTGATGATCAGATCTTAGAAAATTAATCTGTTCTTATTGTC TAGTAGGTAACCCAAGAAAGCTTCAGAACACATCTTTTAATGTGACAGGG GTATAATAATCAAGAGAAAATTGATGTAATCTTGTTGCCTAGTAACCCTA GGAATTTTCAGCAGAACACTTCCAGTTGTGTTGAAGTTTTTACAAGATGC TCACATAATTGTTTAAATAACACAACAAAACAATAGAGATGACGCGTTCT TCAGAAAAATATAAATATAATAAATAGTTAACGACCAATCCAATGACAAA AATTCTTGTAAATGTTCAACTTGACCCAACACGACCCAACACTTCTTTGG TGGAGAAAAATTAGAGATTTTAGAACGTACGTCCAACCATAAAGTAGTAA TAAGTTTAGGGAGACAAGTAGTGATAAAGGTTTTCTAGAAATCATAACAC ATCATTTTTATACAAAATTGAAGGTCATAACATTTGGTCTCCTAGAAGAT AAGAACACATTTTTCTAAAATATCTCTGTCGACTGCTTCTGTCCACTCCA CTGAAGTATGGAGTTATGCAATAGATCTATTATCTATGCATTAATGTTTC CTTACCATTGTTTTGAAAGTGGAGCTTTTAGGAGAACGTGACAACAGTTT ATTGAATAACAGAATACTCCACATACATCATTTTCCCTCACTCAGACAAA TGCGATAAATCAACTTGTTTCTTAGGTAACTGATGTGTTGTAAAAGACAA ATCAGTGAGATGATTATCATTAAAAAATTCTGCTTGAGTAATTAGTTATT CAAAAGACCGTTTTTTGTCGTTGTTTTTAAAGGCTTTGCGAATACCCTTT TTTATGAGGTGCAAGAAAATAAAAGGCACTAAAGTTAGAGGGGCAAGAAT AAAAGGCACACAAAAAATAATGGGGTTAAGGTATATTCAACATGACGTTG ATTCCAACAAAAGGTTTATTGGGGGTTTTAACGGCTGGCAAAGAAGCAAA ATGATGCCTTTTTTTAATATAGTGAGAGAAAATTTATCTATTTCAGTCCA GAAAACCGGCATTTAGCAAAAACATTGGTTCAGAGTTTCGGAATATGGAA AAAATATTGAAAATTTAAGTGATTTTTTATGGACATATGGAATAATTTTG AAAGTTATATGGAGTTTTTAAAGAAATTTTTGCTTATTACCGTTAGGTAG ACTTAAACCCTTCCATCTATTAGATGATGTTGTCATAAAAATTCAATAGA TTGATGCGTTCTCCCAAATGACTATTGATTTCTTCCACAAAGCAAAGTAG CTTTGGGCTAAAGTTTATGAGTCTGATGGCTAACTTTATCTGAAAAAATA TGAATTTTTATTTGAATTTTAATAATTTTTCTGTTCATTGTATCTATGAA GGAGGAAGGGCAAGCTTACAGTTTAGTATGTAAGCCATGGGCTTAATTGA AGTACATAGTAACAACATTTGGAAGAGTAAAAAACACCAAAAAAGATTTT CTTTTACTCTTCTGTGTTGTTTTAGAACATATAATTTTTAGGCAAAAGTT TTCTGACAAATTTAAAAAACAACAGCTCAATTTTAGACAAAGATTTTTCC TTTTTTAAGTTAGAGATCATGAGGTATCTATAAGCCGACGATTGAAAAAT ATTTTGATTCATCTTTTTTTTAATTCTGATTCTTTGCAAGTTGTTTGTAA TGATTTTCATGATATTGTTCATTCAGATTATAACATAAATTTATCAATAT CTCTTCAGCTTCCCTTACAAAAGATACTTCCATTCATTTGTCTATTCATT CATTATGATGTTAGTGTTATTGGTATTATATATATGTTTTTCCTTAGTGA ATGACATATCTTCTTTATTATATATGTTCATGTTTTAGAGTTTGAAATCA CAGAAGAATGAGTGCTCTGCAGCAGATTGAAGATATTGTTGGATGTGGTT TTGACAAGGTTTGCTCTTCCTTGAAAATACCATTTGGATTATTTGTTTTG GCCGCTTAAAAACCTATTAAGACAATAAAAATAAAGATTCTTAAAGGCTG TTCTTCATTTTGAATTTGATAAATTTTCAGTGAAATTCTAATATACAAAG TGAGCGTATTTTCCAATGAAGTGANNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNCTTTTTTTTGGTGCACCCGGTAGGTTTTTCAAATTCCATTTTCAAAT AACGAGATAATTCATTTATACACTCGTTTTTGTTTAGAAGGATCAATTGC GATTCGAAATTAGGTTTGTGAATTCATGGGTTGATCAAATCTTTTTGGAG AAAATGATTCCAGAGGGATCACCTCTCAGATTACGAATGCACATGATAAA AGAAGAGTTCTTAAAGAAAAGTCGTGTAAGATTCTTTTGTTCCTGTAATT ATTATACTTTTATAGAAGGGATTCATTCATATGGAGGGAGGGCTCTTCTA TTTTCTTCAAAGTTTTTGTAAGAAATATCTACTGAAGCCGAAATAAACTC AATAACTTCCATGAACCATGAACATTCCTTCACGAAACCATAAATTAAAC TAAAGTAAACCAAATAAGATATGTATCAAAGTACAGTGATTTTTCTAAGC ACTTTGAGCTGGGGCCGTTTTTGTAAACTTAGATTGAGTTTCTAATATGC ATGAAAGAGAATTTTCTCAGCAAAACTGTATATTGATGAAGCTTGGGGTT TGGTTGTTGTTCAGAGGGCGAAGCTCCCAAACATAATTTGAATATGTATG CTAACAAGCTTAATTTTGCTAGATAAAGTAAGTTCTAAATTCGAAAATCA AATTTAAACTTTACTAGAATATTCATATGAATTATTTTATCCCGATTTCT TCTACAGACAAAGCAGAACGAAGAATTCAAAATCAAGGAAGAGCCTATCG AAACATGTGATCAACAACAGATACTGCAAAAGGAAACTCGCGACAACAAA CAACATAACATGGAATTTGAATCAGAAGATACAACACTATTTATGTGTAA TATTTGTTATACAACGTTTCCAACACACCAAATATTCATTCAGCATCAAG AACAATGTCAGTCACATATAAACACTACCTCAACAAAATCTTCACAACAA ATGAAAACAAATATTTCAAAACAGAAACGTGTGATAGAACCTGAATCAAA TGACTTTTCCACTGATATCAGTAAAACACAAAGGAATCCATTGTCGAGTA TTGTTAGTAAACTTCGTAAAGCACAGGCTGGAAATACAGACGTTAGCTCT GAAAGTGAACCTTTATTGGAATGTGAAGAGCTGAATTCTCCTTCGTCTCC AAAACAAAATCAAGTTTCTACTAAACCAGATCACGAAATTAAACCTATGC TAGGAACGATGGTCCACGAATGTGAAAATTGTCACATGACATTTGCAGAT GCGGAGTATTTACAACGTCATCAAACAAGATGTAAAAATCATGCTGACTC AGCTATTAAGTGTAATATTTGTGGTAGAGGGTTTACAGCTAAGGGTTCAC TAGAACTTCATATTGATGCTGTACATTTGAAAAAGAAAGAGTTTGTCTGT AATATATGTGGTAAAGCATTTTCACGCAAACATATTTTGAAAATACATTT AGATACACATTATGGGAAGAAGGATTTTCAATGTGCTGTTTGTGGTAAAA GATTTTTACAGAAAAGTAATTTGAATCGACATGAGCGTATACATGAATCG AAGAATTTTGGATATGGGTGTCGGTTCTGTGGGCAAGCATTTACACAAAA CAAACATTTGAAAAATCACATGATGGCCCTACATCCTGCGTTAATTGATA AGAAAGTTGAAACCGTATAGTGATGGAGTAGAGGGCTTTCATTTATATAA AAGTTTGAAAACCTAAGGCCCACTACTCCAAGTTGGCTCTACAATAGGGT CAAAAATGGGCCTTTAAAGGGTTAAAAAGGGGTTAGTGGACTGGACCCAC TTGAAAGGCCACACCATATTTTTTGGCCTGAGACAGATATGAGTTTTGAA ATAATCAAAGTTCAAAGTTTGATAAAACATCGATTTTACAATTTCACTTA GTTGTAACGTTGTGAGATTTACATCTCGCTATTTGAATTCGTCGATCGAT TATGAATCTTGATATTCATCAATTCCAATTATCTTTCCAACGAGACTTTT GGAATATTTTTCTTACGTTGGTAATAAAATGTAATAAAAATGTGTTACCT TCTTTCAGAGATTTTTTAACTTGAACTTAAAGTCTGTCCAGATATAATTG GCAGTGGAAACAAGAATGCCTGTAACTTTTGATAGTCAAATATAATTATG GAAATTTTTTTTGCTTGTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00035459TCONS_00035459Clytia hemisphaericatranscript
TCONS_00035458TCONS_00035458Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00035459-proteinTCONS_00035459-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001314supercontigsc0001314:38389..45009 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.11 2.23 0.95 0.47 8.63 5.25 8.12 8 5 5.46 5.77 4.37 6.39 5.07 4.39 4.23 4.82 5.76 3.27 4.58 3.26 3.1 7.85 8.79 4.78 5.25 12.59 9.61 17.34 14.02