TCONS_00035459-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035459-protein
Unique NameTCONS_00035459-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length383

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035459-protein ID=TCONS_00035459-protein|Name=TCONS_00035459-protein|organism=Clytia hemisphaerica|type=polypeptide|length=383bp
MSALQQIEDIVGCGFDKKDQLRFEIRFVNSWVDQIFLEKMIPEGSPLRLR
MHMIKEEFLKKSRTKQNEEFKIKEEPIETCDQQQILQKETRDNKQHNMEF
ESEDTTLFMCNICYTTFPTHQIFIQHQEQCQSHINTTSTKSSQQMKTNIS
KQKRVIEPESNDFSTDISKTQRNPLSSIVSKLRKAQAGNTDVSSESEPLL
ECEELNSPSSPKQNQVSTKPDHEIKPMLGTMVHECENCHMTFADAEYLQR
HQTRCKNHADSAIKCNICGRGFTAKGSLELHIDAVHLKKKEFVCNICGKA
FSRKHILKIHLDTHYGKKDFQCAVCGKRFLQKSNLNRHERIHESKNFGYG
CRFCGQAFTQNKHLKNHMMALHPALIDKKVETV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020729XLOC_020729Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035459TCONS_00035459Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 380..383
NoneNo IPR availableGENE3D3.30.160.60coord: 313..332
e-value: 1.4E-12
score: 47.0
NoneNo IPR availableGENE3D2.20.28.10coord: 358..382
e-value: 0.064
score: 12.7
NoneNo IPR availableGENE3D2.40.155.10coord: 274..297
e-value: 2.1E-12
score: 47.1
NoneNo IPR availableGENE3D3.30.60.60coord: 45..116
e-value: 0.0013
score: 18.0
NoneNo IPR availableGENE3D2.40.155.10coord: 117..222
e-value: 0.18
score: 11.3
NoneNo IPR availableGENE3D3.30.160.60coord: 223..245
e-value: 0.042
score: 13.5
NoneNo IPR availableGENE3D3.30.160.60coord: 298..312
e-value: 2.5E-8
score: 33.3
NoneNo IPR availableGENE3D3.30.160.60coord: 333..357
e-value: 1.2E-13
score: 50.6
coord: 246..273
e-value: 5.3E-9
score: 35.8
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 351..372
e-value: 0.0024
score: 18.1
coord: 320..342
e-value: 2.6E-4
score: 21.2
coord: 264..286
e-value: 0.002
score: 18.4
coord: 292..314
e-value: 6.1E-4
score: 20.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..220
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 233..258
e-value: 8.6
score: 13.9
coord: 108..133
e-value: 30.0
score: 9.1
coord: 263..286
e-value: 0.02
score: 24.0
coord: 292..314
e-value: 0.0062
score: 25.7
coord: 320..342
e-value: 5.3E-4
score: 29.3
coord: 349..372
e-value: 0.013
score: 24.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 351..372
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 294..314
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 265..286
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 322..342
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 292..319
score: 13.568
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 320..347
score: 13.838
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 349..372
score: 11.115
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 233..263
score: 9.078
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 263..291
score: 11.552
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 262..301
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 290..342

Blast
BLAST of TCONS_00035459-protein vs. Swiss-Prot (Human)
Match: ZFP2 (Zinc finger protein 2 homolog OS=Homo sapiens GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.638e-24
Identity = 57/141 (40.43%), Postives = 83/141 (58.87%), Query Frame = 0
Query:  227 MLGTMVHECENCHMTFADAEYLQRHQTRCKNHADSAIKCNICGRGFTAKGSLELHIDAVHLKKKEFVCNICGKAFSRKHILKIHLDTHYGKKDFQCAVCGKRFLQKSNLNRHERIHESKNFGYGCRFCGQAFTQNKHLKNH 367
             +G  ++EC  C  TF+ +  L +HQ    +  +   KCN+CG+ F  + SL +H   +H  +K + CN CGKAFS+   L +H  TH G+K +QC  CGK F + S+L +HERIH  +   Y C  CG+AFTQ+ +L  H
Sbjct:   96 FVGKKIYECNQCSKTFSQSSSLLKHQR--IHTGEKPYKCNVCGKHFIERSSLTVH-QRIHTGEKPYKCNECGKAFSQSMNLTVHQRTHTGEKPYQCKECGKAFHKNSSLIQHERIHTGEK-PYKCNECGKAFTQSMNLTVH 232          

HSP 2 Score: 88.5817 bits (218), Expect = 3.747e-19
Identity = 54/140 (38.57%), Postives = 74/140 (52.86%), Query Frame = 0
Query:  229 GTMVHECENCHMTFADAEYLQRHQTRCKNH-ADSAIKCNICGRGFTAKGSLELHIDAVHLKKKEFVCNICGKAFSRKHILKIHLDTHYGKKDFQCAVCGKRFLQKSNLNRHERIHESKNFGYGCRFCGQAFTQNKHLKNH 367
            G   +EC  C   F+ +  L  HQ   +NH  +   KCN CG+ F+    L  H   +H   K F CN CGKAFS+   L  H   H G+K ++C VCGK F  +S+L  H+ IH  +   Y C  CG+AF+Q+ +L  H
Sbjct:  266 GEKPYECSQCGKAFSKSSTLTLHQ---RNHTGEKPYKCNKCGKSFSQSTYLIEH-QRLHSGVKPFECNECGKAFSKNSSLTQHRRIHTGEKPYECMVCGKHFTGRSSLTVHQVIHTGEK-PYECNECGKAFSQSAYLIEH 400          

HSP 3 Score: 86.2705 bits (212), Expect = 1.966e-18
Identity = 49/139 (35.25%), Postives = 75/139 (53.96%), Query Frame = 0
Query:  229 GTMVHECENCHMTFADAEYLQRHQTRCKNHADSAIKCNICGRGFTAKGSLELHIDAVHLKKKEFVCNICGKAFSRKHILKIHLDTHYGKKDFQCAVCGKRFLQKSNLNRHERIHESKNFGYGCRFCGQAFTQNKHLKNH 367
            G    EC  C   F+    L +H  R  +  +   +C +CG+ FT + SL +H   +H  +K + CN CGKAFS+   L  H   H G+K ++C  CGK F++ S+L  H+R H  +   Y C  CG+AF+++ +L  H
Sbjct:  322 GVKPFECNECGKAFSKNSSLTQH--RRIHTGEKPYECMVCGKHFTGRSSLTVH-QVIHTGEKPYECNECGKAFSQSAYLIEHQRIHTGEKPYECDQCGKAFIKNSSLTVHQRTHTGEK-PYQCNECGKAFSRSTNLTRH 456          

HSP 4 Score: 80.1073 bits (196), Expect = 2.076e-16
Identity = 50/142 (35.21%), Postives = 73/142 (51.41%), Query Frame = 0
Query:  229 GTMVHECENCHMTFADAEYLQRHQTRCKNH-ADSAIKCNICGRGFTAKGSLELHIDAVHLKKKEFVCNICGKAFSRKHILKIHLDTHYGKKDFQCAVCGKRFLQKSNLNRHERIHESKNFGYGCRFCGQAFTQNKHLKNHMM 369
            G   +EC  C   F+ + +L  HQ   ++H  +   +C+ CG+ F+   +L LH    H  +K + CN CGK+FS+   L  H   H G K F+C  CGK F + S+L +H RIH  +   Y C  CG+ FT    L  H +
Sbjct:  238 GEKPYECNECGKAFSQSMHLIVHQ---RSHTGEKPYECSQCGKAFSKSSTLTLH-QRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHSGVKPFECNECGKAFSKNSSLTQHRRIHTGEK-PYECMVCGKHFTGRSSLTVHQV 374          
The following BLAST results are available for this feature:
BLAST of TCONS_00035459-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZFP21.638e-2440.43Zinc finger protein 2 homolog OS=Homo sapiens GN=Z... [more]
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