XLOC_020145 (gene) - C. hemisphaerica

Overview
NameXLOC_020145
Unique NameXLOC_020145
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001204:28962..33247-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020145 ID=XLOC_020145|Name=XLOC_020145|organism=Clytia hemisphaerica|type=gene|length=4286bp|location=Sequence derived from alignment at sc0001204:28962..33247- (Clytia hemisphaerica)
TTCAGCAACAAAAAAGAAAGATAGAATATTGTGAAAGAAAGATTTTGAAC
CATGGAAGATTTATTTCAAAAATATCAAATGACAGAAGCACAAAAGGGCT
TAGTAAATGGCATTAAGAATATTAAAAATTTACCGACCTTCATTGAAGAG
ATGGATGATGTGGAACAATTGATTTGGGTCGTTGCCGTGGCAACCATTGA
CATGCCCAAAGAACCTACAGACAATGATTTGAAGTTTTATAAGAATGCTG
TTGATGAAAGAGTTAGAAGGTATGCGATGTTACTGTACCTCGGAAACAAA
CTTTATTTTTATTCAGCCTCTCCATAAATCTTTTCGATATCTAATGCTTA
TCAAATCTTCATTTTCAGCCTCAAATAATGCTTGTTCATATACGTGCGAA
GGATTTGTCGATTTTGGCCGATTTTCATTTTCACTTTCTAAGACAATTGT
TCAAATTCTTTTGTTTCATTTTAAATATCATTGTTTCAACGTGGCTAAGT
CGAATTATGGTGCAGTGGCAACCTCCCTGTCTCAATGATAACATTTAAAA
AAAAAAATTTGAATGGTGAATTTTCCAAGTTTTGAGCTACGCTAAGCATT
TTTTCTGCAAATTTAAGCCACAGTATACCTTTAAACAATATGCTTATATA
AAAAATAATTAGAACCAGAAAAAGGAGACAGAAATTCACAAAGCTAATGT
CCATTTAAAACATTGCAAACATCGTTGCATTGCATGGACGTTGAAACAAC
AATTGGTTTAATCTTTCATTATTAGGCTTGAAGAAGCAGAAAGGCGTTAC
AAATGGTTTTCATTGAAGTGGAACAAAACATCAATGCGTCGTTTGATAAC
GAATTGGTTTTGTGGTATAATGGTCATCGACCCAAACCTCAAGACCAAAG
ATGGCTCACCAATGCAATTCGTTTATGAATATTACGGACCAGAATCAAAA
TATCCTGACAAGGTTTGATCCATTTTGACCCTTGGTAAACTTGACCTTAA
AATTACATTCCTCTTGTTTTTCTGGCTTTCTTTTGTCATTCGACTTATAC
GTAAATAGAGGTATTTTACTATTCCTATTTCTCGGTTGAAAAGGACACAG
ATCTTTCTTGACTGAGAGATCAGAGATAGACTTGCGTCAAATTCTCTGAA
TAACCCTGTCTCGCCAAAAAATATAAGATATGAATACATTTGACGTTTCT
TTTTCATTGCCAAGTTGCAAAAACCTTCAATATTCAGATTCTCATCAACC
ATTGTATTCATCAAGAGAAACCCAACGGGTCGTCGGGTCGAGCTTCCTCC
CTTCTTTTTCTTTTTGGGAGGTAGTCATGGCGTTCTAAATCAAATTTGAC
ACAGCACAAGAAGTGAAGAAGAGAAAAAATTGTGGAACTGGGTTAGCAAT
AGTTTTGGCAAATCTCATCACGTTAAAAAGATTGATTTGCAATTAATTGA
ATATTTAGCTTAATCACCTTTCGTGGTTTATTGGTAATGCTAGACAGACC
TACATAACTCTTAAAAGAAATGACACATAGGCTAGAAATTTGAAAAAAGG
GACTAAAGGGACTAAAGGGACGAGTGTTTTGGGCGAGACGTCGGTAGCAG
TTAAATTTATGCATTTAAAGGCCGGTCTCCACTTTCGAGCAAAATGAGCG
AAAATTTTTTAACGCTTTTGTAAGGTCATTGATCGGTTGAAAAATGAAGC
AATTCCATTGGTCAAAATTGTTCGCGCGAAACTCTTTTATGACGTAATCT
TTTATGACGTAATCTTTTATGACGTAATCTTTTCTTGAGGCAAAAAAGTT
TGATAAAAAAATTGTCACCCATTTCGCGTGAAATTGGAGACCAGCCTTAA
CTGATGTATGCTCCTCTTTAATGAATGAATTTCATTTTCTGTATTGTCTA
GGAGCATCAAACAGATGATTGGAAAAAAGAAGGGATTGACTTTTATGTGT
TGATGGCTCGAAGCATTTGTAGAACATACCCTGAAGCTACTTCGAAAGGT
CAGTATTGCAAAAGTCATGGGAATTAGCTTTTATCACGGAATTCCGTACT
TTTATTCATTATATTCACAACGTAATGTTTTCTAAGGAAACGTGTGTGAA
CCATCCGGTGTCCCTAATAAAAATTCATTATATTAATCATAATGACATAA
TATTTTCTACGGACCCCGGCTTTTGCCAGTTGTGGCAAATTTGAGCTAGA
GAGAATTGCCACTACTGACCAAATCCAGTGTCCTTAGAAAACATTACATA
ATGACTATCATGAATCTTTAGGAACACCGGATGGTGCACACGTTCAACAA
CAGGCTACCAGTCAAGGTTATGTTCAAATTAGCCGATCGTCGGTTGTTTA
GCCGCAAAATACAATACAAATTTTTACCAATTATCATTGCTTTTCACGAA
ATAAATATGATGGACAGAATTCGTTTTAGTTCACTAAAAAAGTGGTCAAA
TTGCCCAGTTTTCTTTAAATACAGACTTTTTTATTTCATAATACTCATTT
ATTTCCAGGTATTGTATCATTTTCCGACATGTCGGCTTTTGATTGGGAAA
AATACGACATGGAAACGAAAACACGTCATTCAGAAATCGGTTCGTTGATT
CCCAACAAGTTAAGGGCTCTGACCATAGTGAATTTTTCATAATTGCCGTG
TTTAAAATATGTTTTCTGACTGATGTAACCAACAAAACTATGGCATGTTA
TACATTTTCTGTTAGAGAAACTATTCCTGAATCTGAAAATTCAAAAATTG
CATTGAAAAATTTTGATGAAGAAGAAAATGAAGACTTTTGCGAGGAAGAG
TATTTCAACTTTGAAGAGCTTAGTTTCGGCGAAGAAAAAACATTTTGAAA
ATTTTTTTGCAGTAGATGGTGTATCTTTTACCGAACAATAAAAATTTTTG
CGGAAAATTTTTGTAAATGCTTCTATGTCTCGAAATCTTCGAAATAGTGG
TTTTTCATCAATTTTTCAACTGGATTTTGCTTAAAAAAACAGTCATAGCT
TTTGACACATCTTTTTAGAAAAATTTTCCGCAAAATTTAAAATAGTTCAA
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTCGCATGATTACTGTGC
GTCCCGACGATAAAATGAGAGGTTTTTATAAAGACATGACTCCAAGAGTA
AGGAAAAAATTTGGATTTGTTGTTTATGAGGACTTTGGAACCGCCATCGA
GGCTGAAGGTGATCTTCTACCTGGAGAGATGCCACATTTTGTGGGCGGTA
CATTGAGGGTGGATATTTTGAAATGTTTGAAGCATTTATTTTCACAGGAA
CCAGACGCTTTGAAATTGTTGTTGGAAACTTTTGACGAGATGGAAAAAGC
TGGTGAAATACCACACCCCAAACACATGGAGTGATTTTTTTAGCTAGCTA
CGTGATCATTCGGGGTTTAGACATCAAAGTTTCGATAACTCAGGGAAAAT
GGAGGAGTTAAATTTTTCAGATCACTCGTATATAACAGAATTGTTTGTAA
TTTAGTGTCTTGTTAAACTGATTTCATAGCCCTTTTTTGCTTGTTTTTGT
CGACTGTTACGCTTCTTATGCGCATCAAAGAAAAAGTTTCTTGATAAACA
TTGAATTTCATGTATGAAATAAAGGTCCGAACCAAACGATTTGAATTCGA
AATCTTCTTCAACCGAGGGGGGGGCAATGAATGAAAAAGTACCTACGTAC
TTACCAGGGGGTATAGCTATTTGCGTACGCTTGCGTACAGGGTCTTTTGT
TTCTTTTGCTAAAAATATTAGAAAAAAGAATTCAAATCCAGTGCCTTTAT
AACTGTCGATTGTTCTCTGTGTGGGTTCAATTTTGAGACCCTATTTTTTC
GTCTTAATTCTATTGCCCCTCCCTGGGGAACTATTCTATCCTAGTGGAGT
ATTTTTTGCTTCATTTTTTTTAAATCATCCTAATAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00034681TCONS_00034681Clytia hemisphaericatranscript
TCONS_00034680TCONS_00034680Clytia hemisphaericatranscript
TCONS_00034679TCONS_00034679Clytia hemisphaericatranscript
TCONS_00034678TCONS_00034678Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00034680-proteinTCONS_00034680-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001204supercontigsc0001204:28962..33247 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.48	22.73	19.49	24.58	13.42	9.55	13.68	15.2	14.5	14.37	14.04	14.47	15.11	13.47	8.53	7.46	11.96	11.12	14.21	13.14	11.21	11.06	14.16	13.34	26.78	28.3	8.27	6.72	7.43	8.59