XLOC_017258 (gene) - C. hemisphaerica

Overview
NameXLOC_017258
Unique NameXLOC_017258
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000796:143343..147591-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_017258 ID=XLOC_017258|Name=XLOC_017258|organism=Clytia hemisphaerica|type=gene|length=4249bp|location=Sequence derived from alignment at sc0000796:143343..147591- (Clytia hemisphaerica)
TGTAGATATTGTTCTTAAAGAATACCCTCCCCAAACAGTGGCATCGATTG CTGGAAAAACTGCTGGCATGATGCCAGCATCAATGGCAATGATAGTTTCT CCATTGATGGACTCTGGAGCAATTTCTAAAATCAACTGTGTTCATTATGG TAATATGAGGCATGGGAGCTCACTTTTAGGCGATGGTCCTAAGCTTAACT GCCTTTACTTCATTCATAGTGAAATGGAAAATTTACACCAGGTCCTGGGT GATATTCAAGGATTTACTTGTCATGTCGTCATCGAAAATGTTGATATTAT ATTGGCTTAATTGACGTTGTAGACGGAGTTGTATAAAATTAGACTTTGTA AAACTATCTTTTTGTTTTTGAATTCATGGCTAAATTATAGAATTCCCACT TATGCATACCACATTAAAGAAAGTTACCTTCTTAACCAACGTTTCAAAAC CAACAAAACATTCCTGCCGCCATTTTGAAATTTCTCTTAACTTTTTGAAC CTTCGTAATCTACAACCTACTTCTTAAATAGACGTCACACTGCGCGGGGG CGAGCAAAAAAAACTCTTGCAGTTGGCGTTTCGAAAATTGTGACGTCACT TATTTAAAAGAAACCCTTGAAATGCTAAAACGGCTCTTTCTAAAAAATGA CGTCAATTTCAGAAAAGAAGCTATTGACATGTTTAACAGTTTAACTCATA TTCTAAATATGGATATTTTAGAAGCCACTGTAAAGCTAAAGGATCATTAA AATCGCAAAAAAAAAACGGCCATTCATTCATTTAACAAAAGGCAAGAGAC AACAAGGAGGGCTCCACAAGAAATGGCATCAAAAAGAAGATGATGGTTGG GCTGAATTGTACACCAGACTAATCAACTCTGCCAACGATGGGGGCAACAA CGGAGCGGGCGAAGTGACGGTAAATTTGATTAACAACAAAGCAGCAAATT TCCTAAAATCATATGCAAATAAACATGGGTTTAATGGTGCGTTCTTGATG CCAGCCATACTAACAACAATAAATTTTATGTTGTCGAGAATTGGAGCACG GGTTCAAGTGCGTGATGGATTCGTATTGAATTTGAATACATATTGGCTAT TCGTAGGCCAACCCACCACTGGTAAGTTTAATCATTTGCTTTATTCACCT TCTCTCGGGTAACTGAATAGAAGTCCCCCCTTATTAGTTTTCCAAATTTT TCCAACCAGGACACCGCAAACATTTTAATCTTACCCTGCGCTTATTTAGT TTAGAGATTTTTTCCAACCCCCACTCTATTGCATCCCTGGCTATTAGGTA CGCGATAGTATCATATTTCTTAATCGGCAATATCGGACGCACGAATTTTT TTTTTTTTTTTTTTTTTTTTTGTATTGTTTTCTTTGATAGACTTTATGAG CTATGAAATATTTACAAGGACTGTGAACAAAAATATCCTTTAAGAGGATT TCTAAAGCCATTCACAGTATAAACTAGCTACAGTTATAAATAATGATGAT ATAATATATTATCTACGTTATCTTTTTTAGCTAGGTGATTTTGCAAATAG AATACAGCCTTTATGTATAAGTACGTCCAAGTTATAAAAACGCAGGAGAA AAAGAAGAAGAAGAAGAAGAAGAAAAAAAATATATATATTTAAATCTAAA CTAAGTTTTAGTAATTATGAAAGGCAAGAAGACATATTTCAGTCATTATT GCTTTTTAGAGAATCTTTGAGTTTCAATGAAAAAGCAGAGCATAAAATAA GAGAGAATAAGCAGAGAATAAAAAGAGTGCGGGGAAACGTCGCCTTCAGA GAGTAGTGAAACCCCACGGTGTAAGTTTTTTTAAATCATTTTTAGTACCA CATGTTTGGTTGTTGAATTCTTTCGACCGCCCCGGTTGAACATATTCTTT ACTGGAAAGAGAAGTGAAGAGATCATATTTTTATGTAAATATATCCTGAC TTCAGCCAATTTTTATGTGCAATTTTATTTCACCTACAGGAAAATCTTCG GCAATAAAACATGGAATAACCGATCCCATTCCCGATTCGATCAAGGATTC CCTAATTTCGTCTACTACAAGCAGTGGCTTGACGAAATTTCTTTCGAAAA AGTCAGAAGCTTGCATTGTGGACTCGGAGATCTCAGAATATATTTCGCGC TTTGCAAAGAATGATGAAAATAACACAGGTAAATTCTTTGATTATTCATT ACAGAGGTTTGATTTAAGCAATCATTATTCTACTGTACATAATAATAGGT GTTTTGTACTTTTACGTCGTGAAGAGTTTGCTCCTTTTTAGTAAGGGAAA AGGGTGACGGTTACTGTACATAATAATAGGTGTTTTGTACTTTTACGGTA TTTATCCTTATTATTTGTCATTATGCCGGTACTTTAACCTCTACAAACTG GTGGTGACGGTGTTATTATTTTTTTCAATTTTTGGGATTCTGGGATTCAG CAACAATTTTGACGGGAAAACAGTATTTCAAACCCCTATAAACCCCCTAT AAGTCTCTGACTCAAAATCTAAATGTTCCCTTTATACAAATACGTTTTAA AACCTACAAATCACCATTCCAGCCGTCATTTTGAAATGTCTCTTAACTTT TTGAACCTTCGTAACCTACAGCCTACTTCATACAATCTGATTTGATCTAG GAGTTTGTTGAATCAAAAATAGAGTTTATTTCTCTATTTATATTTTCTAT TTTATAGGAGAAATCGAGAACATATGTAAGATATATAGCGGAGAAACAAT CAACATAAACTATGCGACGGAGAATCAGAGACACTTGAAAGGCAATATTC CGTTTTGTATTTTGGGTACGTACACATTATTCATTATAACAAATTATTCC ATTGCGGTCGATTTAATGTATATAAGATTTCATTTAAAGGCACAAATTTA TTTGTCACATTTTTTGGTTAAAATTCACATTGCATTTTTGAATAAAACTT TTGAACAATGCTATCAAAATTTGATCCTTATAAATAAGTTTTAACGGTTT TTCTTTTCTCTTTCCTTAGGATCAACACAATTGAAAAACATTTCAATGCT ACTTGCTACTATAGACAGGAATGATGGATTCTGGGAGAGATTTTTAGTTA CAGTTCCAACTCCCTACCGTCCTAGTCCAGAGGAACAAGTTTCTGCTAAT CGCAATTTTGGCCAAGAATTCAACTTCGACATGAATGATTTTTATTCAAA ACTGCAAGAGATATTGGATCCAGAAAATCCTCCAATCTTTTATCTTGGTG CGAGTGCTGCTGAGTAAGTAGATAATTAAATAAAATAAAGAAGGTGTACT AGATTACGAAATTGCGGAAACCGACATTTTTAATTTTTACATTTTTTTAG TACCTTAAGGGAAATAACTTTTGTGGGANAAGTAAGTAGATAATTAAATT AAATAAACAAGAGCAGCCGCCGGCAGATTTTTTTGAAATATCTGTTCTTT TTTTCCAGGAGAGTAAATTTTATGGATAAATCTAGGAGAGACTTTCCTCA AAACACCCAGGTAAAATCCAGGGGTCGCCTTAAAAACATCTGTTCTTCAA ATCCAGGAACACATTTTAACAGATGATATAATCCAGGAGAGCCCAGGATA CAGAACAGATAGTTTTTTCCAGGAGAAAGGGACCTCAAGAACAGATATTT CATACTTCCTAGCCGGTGGCTNTCCAATCTTTTATCTTGGTGCGAGTGCT GCTGAGTAAGTAGATAATTAAATTAAGTAAAGAAGGTGTACTAGATTACG AAATTGCGGAAACCGACATTTTTAATTTTTACATTTTTTTAGTACCTTAA GGGAAATAACTTTTGAGGGAACTTATTTCAGCGATTCGAGAGTGTGAAAT CGTCATTTTTTGCGAAACCAATTTTCGTGGTAGACGACACCCACTTGTTG CCTAAATAATTTTTTCCTAAAGATTTTCAAAAATTTTCACTGATATTTGC ATTTTGCGGAACTAATTTTCGCGGCAGACTCCCAAAAATAATTTGCTTTC TTTCATTCCTTTCATAGATTTCTCAATAAATTGGAAACAGAATTCATTCA CGACTCGAATTCGAAAATGAGGATGGCCATACCCGTGAAATCTTCTAAAT TGGCCGATACCATTCCAAAGATAGCAGTGGCGCTACACACTATGGAAAAG GTTTTCGCTATTTTATGTGATAATTCTGCCATTGGTTTGGACGAAGAAGT CTCACTCGAAATGGTGATACAAGCCAGAAATATCATAAACAATTCAGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00030163TCONS_00030163Clytia hemisphaericatranscript
TCONS_00030162TCONS_00030162Clytia hemisphaericatranscript
TCONS_00030161TCONS_00030161Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00030162-proteinTCONS_00030162-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000796supercontigsc0000796:143343..147591 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.38 1.11 1.64 2.52 13.03 9.67 8.77 12.95 5.74 2.62 5.32 4.38 8.16 11.49 3.95 6.72 3.29 3.4 5.18 4.14 2.3 2.48 1.45 1.89 4.17 5.31 5.96 4.15 3.95 2.43