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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00030161 ID=TCONS_00030161|Name=TCONS_00030161|organism=Clytia hemisphaerica|type=transcript|length=528bp
agagcagccgccggcagatttttttgaaatatctgttctttttttccagg
agagtaaattttatggataaatctaggagagactttcctcaaaacaccca
ggtaaaatccaggggtcgccttaaaAACATCTGTTCTTCAAATCCAGGAA
CACATTTtaacagatgatataatccaggagagcccaggatacagaacaga
tagttttttccaggagaaagggacctcaagaacagatatttcatacttcc
tagccggtggctNTCCAATCTTTTATCTTGGTGCGAGTGCTGCTGAATTT
CTCAATAAATTGGAAACAGAATTCATTCACGACTCGAATTCGAAAATGAG
GATGGCCATACCCGTGAAATCTTCTAAATTGGCCGATACCATTCCAAAGA
TAGCAGTGGCGCTACACACTATGGAAAAGGTTTTCGCTATTTTATGTGAT
AATTCTGCCATTGGTTTGGACGAAGAAGTCTCACTCGAAATGGTGATACA
AGCCAGAAATATCATAAACAATTCAGAG Run BLAST on NCBI transcript from alignment at sc0000796:143343..144182- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00030161 ID=TCONS_00030161|Name=TCONS_00030161|organism=Clytia hemisphaerica|type=transcript|length=840bp|location=Sequence derived from alignment at sc0000796:143343..144182- (Clytia hemisphaerica)
AGAGCAGCCGCCGGCAGATTTTTTTGAAATATCTGTTCTTTTTTTCCAGG
AGAGTAAATTTTATGGATAAATCTAGGAGAGACTTTCCTCAAAACACCCA
GGTAAAATCCAGGGGTCGCCTTAAAAACATCTGTTCTTCAAATCCAGGAA
CACATTTTAACAGATGATATAATCCAGGAGAGCCCAGGATACAGAACAGA
TAGTTTTTTCCAGGAGAAAGGGACCTCAAGAACAGATATTTCATACTTCC
TAGCCGGTGGCTNTCCAATCTTTTATCTTGGTGCGAGTGCTGCTGAGTAA
GTAGATAATTAAATTAAGTAAAGAAGGTGTACTAGATTACGAAATTGCGG
AAACCGACATTTTTAATTTTTACATTTTTTTAGTACCTTAAGGGAAATAA
CTTTTGAGGGAACTTATTTCAGCGATTCGAGAGTGTGAAATCGTCATTTT
TTGCGAAACCAATTTTCGTGGTAGACGACACCCACTTGTTGCCTAAATAA
TTTTTTCCTAAAGATTTTCAAAAATTTTCACTGATATTTGCATTTTGCGG
AACTAATTTTCGCGGCAGACTCCCAAAAATAATTTGCTTTCTTTCATTCC
TTTCATAGATTTCTCAATAAATTGGAAACAGAATTCATTCACGACTCGAA
TTCGAAAATGAGGATGGCCATACCCGTGAAATCTTCTAAATTGGCCGATA
CCATTCCAAAGATAGCAGTGGCGCTACACACTATGGAAAAGGTTTTCGCT
ATTTTATGTGATAATTCTGCCATTGGTTTGGACGAAGAAGTCTCACTCGA
AATGGTGATACAAGCCAGAAATATCATAAACAATTCAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00030161-exon-sc0000796-1575043694:143887..144182 | TCONS_00030161-exon-sc0000796-1575043694:143887..144182 | Clytia hemisphaerica | exon |
| TCONS_00030161-exon-sc0000796-1575043694:143343..143574 | TCONS_00030161-exon-sc0000796-1575043694:143343..143574 | Clytia hemisphaerica | exon |
| TCONS_00030161-exon-sc0000796-1510915933:143887..144182 | TCONS_00030161-exon-sc0000796-1510915933:143887..144182 | Clytia hemisphaerica | exon |
| TCONS_00030161-exon-sc0000796-1510915933:143343..143574 | TCONS_00030161-exon-sc0000796-1510915933:143343..143574 | Clytia hemisphaerica | exon |
| TCONS_00030161-exon-sc0000796-1491911889:143887..144182 | TCONS_00030161-exon-sc0000796-1491911889:143887..144182 | Clytia hemisphaerica | exon |
| TCONS_00030161-exon-sc0000796-1491911889:143343..143574 | TCONS_00030161-exon-sc0000796-1491911889:143343..143574 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000796 | supercontig | sc0000796:143343..144182 - |
Blast
The following BLAST results are available for this feature:
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