XLOC_017172 (gene) - C. hemisphaerica

Overview
NameXLOC_017172
Unique NameXLOC_017172
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000788:74143..80785+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_017172 ID=XLOC_017172|Name=XLOC_017172|organism=Clytia hemisphaerica|type=gene|length=6643bp|location=Sequence derived from alignment at sc0000788:74143..80785+ (Clytia hemisphaerica)
ctgagtgaatatagtttgACAGAAATTCTGTTTTCTTTACATATTTTATA GTgaacttttttattatttcagtgaaaaacaaagaaatgaaaaattatta gaaagaaaacagctgaaaaaggGAAACTTGGAATGGTTCTATCGGGCTAT TAAAGCATAATGATATCAACATTAATTGCTCATTTGAAGAGTATTGTCAA CATTTTAAATCATTCACAAGCTTCAATTGTTGATGTTATTTCGTAGCATA TTACAAAGGTAAAAATGAGTATTTAGGactcaatttctttttgtcTGGTA GCAACATGACCAACTGATGCTCTTATTATTATCATCTTATGGTTTATTTG AATCAATTCTTTTTCGTTCCACTTTGATCTAAATTTTAGGCTATCCTATC AACCCTATCAACTATCATCATCTTGATTTAATTTGATTctatttggtttt caaaattattttcaagccCATATAACACTCTATCGTcagatttttattgt tttgtcaAAGTTGCCTTTCTCCTCGAATTCATTTtaactttgaatatttt taattgtCTCTCATGCATTGAACGAACAACGGAATAGAAATATATTCAAG ATCAAGGCTCGAAATAACTATTTCAggtgggtcggacaaaatgtccgatc agggttgctttagcttgaaaattatgatttttgggtcggacatgaagcta tttgggtcggacaatgtccgatgtccgaccgttatttcgagccctgcaaG ATGTTTGACATTGACTCTGATCGACTTCATAAATTTTGTTCTCACTAGTA TCTAACCGAGACATCAATGTGAAGAAATCAAGTAAAGATTAATCAACAAT TCTTTAATAATTGAGTAATCAGAAGATGTCAGTGTGAATAGTGGAAAATC CACCACCTTGCGCAATGATGTGAGAAGAATCttttaaaacacaaaaattt ccaatttgAACAATCCTCTCAACTCCCTCATCACAAAATGACAAGTAATT GTACTACATCCCTGATTTGTATGCAGTATTTTGATTAGTTACTAAGCATT CTTCAATTAATTAGAAAAAAGCATAAACCTTAAGTAAACGGTATCTTTTC ATGGTTTTTAGAGGCTGCAGAGAAGGGGAATTAGACTATTTTAAATTACT TCTCTTTCTTTTAGTTACATTGATACCCTTTGATTCTGGACGACGGCTTT TGCTtcctaaaaaaatcaaagaagaagTTTGCCTTGGCCaagatgatttt tgatatttggctggCAGTGGGTATGATAGAAAATAACCAATTGCATCAAC ATGAACCTGAATTTATCAGCAAAAAGTATTTGGGTGTTGGCTTGTGAGTT TtggatttctttattttttatgaatgtcTGTGTTTTTAAATTTAGAGGGT TGTGTGTTTATGATAAAGCATAGCTGGTAAAAGTGATAAAGTGAATTTTG CACTATAAATTTATCTTTTATCAAGAGTTCCTCTCTGGTTCTCTTGAAAA AGAAGTGACTGCAGAAAATAGTCTTCGACAATATTAATCAATCTACCTTA AATATTCTTCCAATCAGCTATAACCATGTTATTTTTAAAAGGCTTAGCCC TTGCATTTGATCTAGAAATGTTGAGTTTTGCTACATTATCATTCAAAATA ACAGGTGCCTCCATTAAATTCATCATAAGTTTAGTAGAATTATCCGTATG TTTGGTGTAGTACCCGCTACAAATGCTGGAGATAGCACATGCAGTGGTGT TTTGGTCGGTCCCAGTTAAAGGGTATTCGCCTGTTTTGACATAACTCAAC CAACTCTTCTGGTTCAATTGTGACGGTAACATGATTACAAAATTCCTCGT ACGAGTTTGACTGCGTTGGCCATCGCAAATAGCCTGTTAAAAGTGAATGT GAACCGGTGACAAGATAATTACTCGGCTTTTTTATGTAATAGTAATGTTA TTTTGTTTATGATTCCAATGGGAACCCAGGCAACAAATCTCTCTGTTCTT TTCTTCCAGTACCTCTCGTTTCAATTCTTTCCCAACAAGATGTAAAGAGT TCTCTAGGGTTTACATCAGGGGATCTAGCATTGATTCACAAATAATTGTT CATCAAACCGTCCAATTGCTCTTTTGCCGCGACTGGAATTTCCAACAGGA CAACAATCCTGTAAGATGTGCTTGTCCTTTGGGTTGTTGTATAAGTTGAA CGCAAGAGGAAAATCACATCATCCTTGCAAACTTAACCCATTCAGGTTAA ACTCAAATTCCTTGCACATCACCATCCCTTTATTGTCAGATATTGCTACA ATAGATTCTTCTGAGTTGTAACCTCTTTTTGATCCTTAGTCGTGTAtcca aaatttaatgaaattagaGGGTTTGTTTAAATGAGATATGAGGTAGGAAT GTCTTCTAAGAGATCTTCTTAAAAATAATAATCAATTTCGAGTATGCAAT TTGATTAATGATTGGCTTATTTAAGCGGTTGAATTCGATTATTTAGGCAA TtgaattcgattatttaagcgaattaTGACCCCTTTTGAATTCGATTATT ATAGCGACGATTAAATaataattcgattatttaatcgaATTCTCAATTTT GATTAATTAAATTTGCACCAATTCTCCAAATTCACTCGATCGAGGCAATA TATCAGAATATATCATGAATACTAATATTCTACATAGCGATTAAAACTAC TATACCCTGTTCTCTATAACCATATCTTTGCTACACGCTACCTGAAACAA GGCAAAATATATAAGGTGTAATCTTACACATTGTTAAGCTCTGTGTTTCC AGTGCAGTAGCTCCATAGAAATTATTCAACTTTATAATAAATGATTCGTA CCTTTGAAAGTTTAAATGCTTGAGAAAATTCGACTTTTataatcaataaa aatttctgTCTTCCAAAATATTGTACAACTTGCTCTTTCTCTCCTGTCTT ACTCGATCACCAAGTTTTTTTACACCAAGGTGTGTAAGATCTTCATGGGA TGCTGAAGTAATCACATTAGCATCAACTTTTTCATCCTTAAATTTTTGTA CAACTACAAGATATGCCAAACCTACTTTGACCAAAGCTTTCTCAATTtct ggacctacctcggaggtcctttgatttaactttgttcGTGCGTCCGTCCG TCCgctcgttcgtctgttaccagcttttctcgggattggcccaatatttt tttctatttttttgcatagtgatgcaaaatgacagtaCCAAAAAagtgac agagcctgattttcgaaaaaaaaattctttgggGCAAGTTTGGGCAAATT TACTCTTCAGAAGGGCGTTTAATATTTTGCCAACCACACGTATGTTCGAC TTTCAGGTGATTTAAACGAAAGGTCTATCGGCTGCCATTCTGGTTGTGGG TGACACCATGGAATTTTATGTATATGTATAaagaaagataaagaaaaagt atcttttaaaaatatttacaataatttcaaaagttttctacaTTACAAAA CACNcaaaaaagataaagaaaaagtagtatcttttaaaaatatttacaat aatttcaaaagttttctacaTTACAAAACACTATAAAAATGATGTCAATT ATAGGATATGTACAGGGTgtcctaaaaagaaaaatacatgtGAAGCGAAT TTCGTGACTCTTCGATtcgagaaaatcaaaaaagtttattaTTCGCAAAG ATTTTTTCTCCCAATAATGCTCAGCTACCTTATCCCAGAAATACGGATGA TAGTACCAATATGCTAGACCCCATACTTATTGACAATCACAAGTTAGCCA AAATATACATGTCAATGTGATTTGCTGACTTTTGAAGGAACGATTCACCG CTGAGTAACGGTGTGCCGCCAACTCTTGCTCAGAGAAAGAATTCTGAAGT TCTTTTTTTATCATCCGTGTGGCTTTGTTTGTTTTTCGCTTTTTCATGAG GGAGGGTGGCATCGGGCGGAGAATTTTCTTCCACCTTAGTTCTTGTTTCT tccatttcttcttcttccaccGCTTCTTTTTCTTGTGAACTTTCTTGCAA CTGAGGAAACAACTCCTCATCCGTCATCAGTGACACGTAACTGATGTTTT CTTCAAAGAAACTGTCGACTTGACTCTCTTGACTTGAAATTAGTTCTTCG TTTCGAACTATATTTGTGTTTGGTTGTGTTTGTTTTTCCTTCTCTTTTTA AGGTATGTATATTCATCTTGTCTTATATTGACATCTTCTAATCTAATATA GTCtcctttccaacagaaaatatTTCCTAGTGCTTATTTCAAGCTCGTCC ATTTCTTCGTTTAGTGCAATGTCTCCAGTTGCAATTTGATGGAGGTCTCG TGGGTTGACAACTTGATCTTTTGACAATACTCCACTGGCTAGGTCATCCA ATATTGTCGCTTCGTATGTTGAAAAGTCCTTCTTAGGtttatccttattt ttttttttcctccTTTTGAGTGAAGTGACGAAGGCTTGTATTGCATATAG CTTTTTTTTCATCTAGAATGTTTGAGCTCATGGTATAACGTACAACTTCT TCATATGATATTTTTATAATGTTAACAATTAGAACATAGAAAACATGCTG TAGATTTTCTAGTGATTGATTTCTTTCAGTTTTACTCGATCACCAAGTTT TTTTACACCAAGGTGTGTAAGATCTTCATGGGATGCTGAAGTAATCATAT TAGCATCAACTTTTTCATCTttaaatttttgtacaaaatatgCCAAACTT ACTTTGGCCAAAGCTTCctccatttttggacctacatCAGAGGTCCTTTG atttaacctttgtccgtccgtctgtccgttcgtctgttaccatcttttct cgggattgaaccatattttttttcagatttttagcATAGTACGGTAGTCT AGATGTATGAGAAAAATCACACGGAGCTCTTCATTCCGCAtttctaaaaa cttttttacaaaacCTTTCATTATTCACGAGAAAAACATACAGTCAAGAT TCAGGTGACAAAAAATTGGTATTGTACCCGAAAACTATTTGCATGTAGAA CTTCGTCCCAAATTTAGAGCAAAAAAGTTGATAACTGAGTGAAAAATAGT TTGGCGtcacatttttccaaaaaaataccAATTCTCATTTGGTGTGCAAG ACTTGCTAAATTTTCAAGTCCATTTGAATATTTCATATAAGTCATCAAAA TATTTCGTTTGAATCGTTTAAAGCCCGAACCAAGATGCACGAATGGTAGG TCTGCTCTAAGACTCGGAAGTAAACCTCACTCCTTCAATTGATTTAACTT CTTTGTAGTGACAGTTTCTTCTGCACCATTCTTATTCACGAAGGTGATCA ATTGTTGACTGGCAGCTCGACTTTTCGAAGGTGGTGTCACCTTGGTAGGT CCATTTTGTGTGGGTGGAATGGCGTTGGGCGGAAGTAAACCGCACTCTTT CCATTGATTAAACTTCTTAGAAGGGACAATTACTTCTGTACCATTCTTAT CCACGAAGGTGATCAATTGTTGGCTGGCAACTTGACTGTTCGAAGGTGGT TTCACCTTGGTAGGTCCATGTTTCAAGGGTGGAATGGCGTTAGGCGGAAG TAAACCGCACTCTTTCAATTGATTAAACTTTTTGGAAGTGACTGTTACTT CTCCACCATGCTTATCCACGAAGGTGATTATTGAACTTGCTTCTCCATGG GACTGGTTTGCGTATTACGAAGTTGAGTCATTCTCCCCTTGGTaatattg ttttgatttcgtcTCACGATTTCTTCGCATGAGTTTTTTCGGGAGGAAGA ATGTTACTATACCTAAACTAGAATGTTACTGCTTATTGCATGTCTTTGCA GTCTTGCTTGTTCGCTCCAGATCAACTTCGTAATCGACAACTGTTTTCAG CCATCTCTCTTCTTGTCTGCAAACTCGGTTTGCTTTCAATGTTGACACTA TTTTCACACTTATTATTTCACTTtgtaaaattaaaacttttcacCAATAA AATCAGGATCAGAACTAAATCTGCATACTCTGAAAAGGTTTTTGTTTCAA TATGGAAATTTAAATAAAGTTTGAACTTTCATgtgtcattttttatttga cgtcaattatatGTATCTACGTCAAATGTTTAGGACGCTTGGTTTGCTCT GCGCAAATTCGGGGCATCTTCCAGCTTTATTTCCTCGCTATTCAATAAAG ATTGAAATCAACTTTTTTACCGCCTTGAAAAGAAATCTGCAAATAGTTTC CTGTGTGCCATGCGCAAGGAAATTTCTCCCACTATTTAAATCAGATAGAG TATTGAAATACCTTGAAAACCTTAGAACTAGGAACTAAAACAACCCACCG TCCTTTTGAAATGTAGATTTTATGCATTAAGTCTGTATTTACACTCTACC TCTGGTTATGTTTATTCTGAACAATTTTACTCTGCATATATATTAGGCAC AATTATGTTCTCTGTCGTCATACTAAATGAAGCTCTGAGTCGAAATTTGA CCTAGGTGGTGCGACCGCGAGCTCATCGCTTCTGGTCTACTAAAAATTAT ACACATGATATTTACAGGGCCCTAAAACACTTTGAAAATTAATCCTTAAA TATTGAATACTGCGAAGACGTTAAATTTCAAGGGAAAGCAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00030027TCONS_00030027Clytia hemisphaericatranscript
TCONS_00030028TCONS_00030028Clytia hemisphaericatranscript
TCONS_00030029TCONS_00030029Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000788supercontigsc0000788:74143..80785 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09 0.1 0.56 0.63 1.66 0.8 0.52 0.52 0.18 0.33 0.33 0.18 0.12 0.12 0.1 0.11 0.15 0.12 0.07 0.06 0.19 0.12 0.05 0.1 0.49 0.71 0.04 0.03 0.03 0.05