XLOC_016964 (gene) - C. hemisphaerica

Overview
NameXLOC_016964
Unique NameXLOC_016964
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000763:151254..159523-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016964 ID=XLOC_016964|Name=XLOC_016964|organism=Clytia hemisphaerica|type=gene|length=8270bp|location=Sequence derived from alignment at sc0000763:151254..159523- (Clytia hemisphaerica)
CCGGGGCTGGAGACAGGGGTGTATAAGAGCACGAATCCGTTAGTAGATGC
CTTAGATTCTAAGCTTGGTCAAATTAGTCTCATTAAGGGTTGTAAAATTC
ACAAAATTTTCCAATTTTTCCTTCTATTTAGTCCCGCTAAGGGTCGGGCG
GCACATACCCGTCAGCTACCTAGTGGCCTGGTAATAATTCTCATCAGTCT
GGGAATTTTTCGTCACTTTCTTTTTAATTTGTTGTCATACCAACCAAGAT
TATGTTTAAGATTTTAGTGTTTATCTAATTTCAGCAACAAAGAGAAAATA
AATAATGTCAGAAGAAAACGCAAATTTAACGCAGGAGTTATCACATCACA
ACGAGCCTGCTATTTCAGCAAGGGAACCTCCTCAAAAGCAATCAATCCCT
CAGGGAATCTCTACCAACAATCAATCACAGGAATCACCTCAGGAATCATC
AGCTGGTCAAGGTATCATCTCTACAAATTATCCAGTAATTACAAACATAT
CTCAAATCAATCGAAGCCGTGTAACTAACACAGACGTCGTGGAGATTGAA
GTTCCGAGTAGTAACGAAACTGTTCAAATCAAATCGTACACATCGCTCAA
TAGTCTTCCAGGGGCGTCCTACAGACCAACTCCTTCGAGTCAGTTTTCGA
CAATGGCTGTAACAGATCAACATCAAAACATGCCGAACCTTGAGCATTCA
TCCTCGATACATTGCAACATGAATGAGAAGTCTAGAAAACCAACCACGTT
ACCTCAAACTTCTTTGTAAGTAAATGCGAACTTCTATTTTTCTCTGATTC
GAAGAAAAGTATATATATACTCCCTTGTTGAAGATCGAATTAGTAAGAGT
CAACCTGAACAGTTTTTCCCATCTGTCTCTCTGAGTACTGAGCTCTTCGA
TTTTCCCGGATTTTTCCCACTCAAAAGTCTTTGGCTCGTTTTCAGCGTTA
AACTCTGTTAAGTTCCACATTTTTGTACACTGATTTCTAACCTTCTTCTA
CCCATCCTCCAGAAAAAAAGTTTTCTTATTAGGAAGTACGTATCAGGCAG
TATGTCTACAGAGGTCTGCGATTCAGACGCTTTTTTTATAAGAATACAGT
TTATAAGAATGTCCATAATGAAAATGGCCAAACAATTAAGAATATAGTAG
GGGGAAATTTGTAAAATCGCTCGATTTTTTTAGTCAAAGCACTTGTTATA
CATTTTTGGAAAGCTAAGGGGTAGGTAGCTGGGAGACCCGGCTACAATGT
CCGTGTGGTTTTGAGGTATAGCATTTAGTTCGAGCAGAAAATATCAGAGT
TTTGACATAGTAGCCGGGAATTATTGAAGATGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGCCAA
TTTTTTTTCGGACACTTTGGTGTGATTTTCGGACAAATACGACGGTGTCA
GGCAAAAATCATAGGGTGAAAAATTAATGAAAATTTTAGCTGGAGGAAAC
GGAGACCTGTTGTATATTTTTGGAAAGCTCTCAAAAAAATAAGATTAGAA
ATATATTGCGAGAATAAGTGATTTCAGTACCTAACTCGAGATATTGTATT
GAGCTTCTAAAAGCGCAAAAACTGGACAAAACAGCTGTTTCTGGCTGAAA
AACACTGTTTTTAAGGATTAATATCTCGAGTTAGGTAAATAAATCACCTA
TACTCGCAATATATCACTAATCTTGATTTTTTGAGAGCTTTCCAAAAATA
TACAACAGGTCTCCGTTTTCTCAAGCTAAAATTTTCATTAATTTTTCACC
CTATGATTTTTGCCTGAGACCGTCGTATTTGTCCGAAAATCACACCAAAG
TGTCCGAGAAAAAAATTGGCACCCAATTTATTTTGATTCCCCTACCCCTT
AGTAGCTTTCCAAAAATGTATAACAAGTGCTTTGACTAAAAAAGTCGAGC
GACCTCAAAAAAAACGAACAAATTTCCCCCTACTAATATGGTAAGAATAT
CACCATCATGGAATTTAGCAACTGAACCTAAGAATGCCATTTTTTAAGCA
TTTTCATCAATAATACCCCAGTAACGCTCAATATTCTCCAGGCGTGTATT
ACATGGTAAAATCTAGGTTAATTTCGATCTTTATCTAAGAATACTTTAAT
AATATTTTTGGATGATTTTCGACAAAAAGTTAAGAATATCCATGATGAAA
TGAAAATGCACCATTCTTATAAAAAAAGCGTTTTTAGTTGTCTTGCCAAC
ATTTTGATGGAAAGAAAAGTAAAATAATACGAAGTTATAAAGATAAAAGG
ACTTTAAAGTCTGTCTAATCTAGTACACTTTTCTTTTTACAAGAACCATT
AAGCTTTTGGCACTTGAGTCTCAAATTGTTATCATATTCTTATTTATAGG
GTTTAATTGGTGTATTTGAGGCTCTTACTCAATTCTTTTCCATTTTGACC
GCTGAATTGCTTGAAATTGGGTAATTCCAGGCTCAGCATTGTTCNCCACG
TTACCTCAAACCTCTGTGTAAGTAAATGCAATCAGCTCTCTCTAATTCGA
ACTTCTATTTTTCTCTGATTCGAAGAAAAGTATATACACGCTTTTTTTAT
ATAAGAATACAGTTTATAAGAATGACCATAATGAAAATGGCCAAAAATTT
AAGAATATGGTAAGAATATCACCATCATGGAATTTAGCAACTGAAACTAA
GAATGCCATTTTTTAAGCATTTTCATCAATAATAGCCCAGTAACGCTCAA
TATTCTCCAGGCGTGTATTACATGGTAAAACCTAGGTTAATTTTCGATCT
TTACCTAAGAACACCGTAAGAATATTTTAGGATGATTTTTGACAAAAAAT
TAAGAATATCCATGATGAAATGAAAATGCACCATTCTTATAAAAAAAGCG
TGTACTTTTTAGTTGTCTTGCCAACTAAAATAATACGAAGTTATAAAAGA
TAAAAGGACTTTAAAGTCTGTCTAATCTAGCACACTTTTCTTTTTATAAG
AACCATTAAACTTTTGGCACTTGAGTCTCAAATTGTTATCATATTCTTAT
TTTATAGGGTTTAATTGATGTATTTGAGGCTCTTTACTCAATTCTTTTCC
ATTTTGACCGCTGAATTGCTTGAAATTGATTAATTCCGGGCTCAGCATTG
TTCTTAAACCCATTGACCTTTTACATAGTTATAATGTATGTTGATTCAGC
AGATTGAAATTAATAGAATGTTTTGTAATGAATAAAGAAAAATGTGGAGC
AAGATTTTTTTCTTCCTTTTATTTACAAATTTGGAAGGACTCTTTTATTA
AAATTTTGCTGACATCAGTTTCAGACGAGTCGGGTGTATATAACACCGTA
TAATTCCTTTAATCTTTGAGCCTCATTTCTTTATAAAAGACTGTATTCCT
TTGATCCTGAATATGATTTGAATTATTTTCTCTTTTCACTTAGGTACGAC
AACAACACCAAACAAAATCAAATTTATCAACAACAGACACCAAACGACGG
TAGTCCAAACCAACAACCGCATCAAACGCACCAATTACGGTCGCCAATCT
ATAAGGAACAGTTATCGTTCCCTCAAACTCCTCAAATGAACACACAACGA
AACTATCAGATGCCGCCCACTCCTACTACGCCGTTAACGCCAACGCCATT
CATCAACAATGATGACGTAATCGCTAATTCGCCATATTACAATGACAAAT
ACATGACGTCAGAGCTCGCGATGACCGCGCGGGCCTACGAGTTGCAACTA
CTGAGACATCAAGAACAGCTATATGAAGAGGCTTGCCAAATGAATCGAAT
CAAGTTCTACAACGATTTTCAACAGCAAGGTTACGTGCCACCGCAATACG
CGAACCTTAACTCGCACTCAACCCCCAACACACATCTTCAGTCGCCAACC
AGTTCGTCCTCACAGCATACTTTTCATTACGGTGGCCAACGATCACCTTC
GGTGGCCCATCAACAAAAACTTCAACGTGCAATGGAGAAACAGAAGAAAA
CTCAACAACGCCAGCAACGAAAAAATAGATCTGTTTTAGATCCGTCGCAT
ATTCAAAACGGAATTGTTCCATCAACAACTCAAGGCCATCGTAACCAACA
ACAGCAGAAAGAACACGAGAAATTATATATGGAAAGACTTGAGAAACAGC
GTCAAGAACAAATCAAACTCTACCATCGAATCCAATACCAACAATATCAA
CAACATCAGAGATATCTTCAACAACAACAAGTCCAACTCAACAATTACAA
TCAACAACCTACTCAACAAAATCCAGGGTCGCCCTCCACTTATCAGCCTC
CAAACTCGATGATGTTGTCACCACCTTTAACACCAACTCAACCAGCTAGC
TATCAACCAGCGTTCCAGACTGACAACTATCACCAGAGTGTACCATCACC
TTCTGTAAACAGATATCATCCATATTCTCCAGCGGCCTCAAGCAGTACCA
GATCTCACCAGATCTCACACCGCCCTCAATTTCAATGTCAGCCATATCCA
ACGCCAACAACCGAATTGGAGAATTCCTCTTTCGATTTCAGCCATTTATC
ACCTGNTGACATCAGTTTCAGACGAGTCGGGTGTATATAACACCGTATAA
TTCCTTTAATCTTTGAGCCTCATTTCTTTATAAAAGACTGTATTCCTTTG
ATCCTGAATATGATTTGAATTATTTTCTCTTTTCACTTAGGTACGACAAC
AACACCAAACAAAATCAAATTTATCAACAACAGACACCAAACGACGGTAG
TCCAAACCAACAACCGCATCAAACGCACCAATTACGGTCGCCAATCTATA
AGGAACAGTTATCGTTCCCTCAAACTCCTCAAATGAACACACAACGAAAC
TATCAGATGCCGCCCACTCCTACTACGCCGTTAACGCCAACGCCATTCAT
CAACAATGATGACGTAATCGCTAATTCGCCATATTACAATGACAAATACA
TGACGTCAGAGCTCGCGATGACCGCGCGGGCCTACGAGTTGCAACTACTG
AGACATCAAGAACAGCTATATGAAGAGGCTTGCCAAATGAATCGAATCAA
GTTCTACAACGATTTTCAACAGCAAGGTTACGTGCCACCGCAATACGCGA
ACCTTAACTCGCACTCAACCCCCAACACACATCTTCAGTCGCCAACCAGT
TCGTCCTCACAGCATACTTTTCATTACGGTGGCCAACGATCACCTTCGGT
GGCCCATCAACAAAAACTTCAACGTGCAATGGAGAAACAGAAGAAAACTC
AACAACGCCAGCAACGAAAAAATAGATCTGTTTTAGATCCGTCGCATATT
CAAAACGGAATTGTTCCATCAACAACTCAAGGCCATCGTAACCAACAACA
GCAGAAAGAACACGAGAAATTATACATGGAAAGACTCGAGAAACAGCGTC
AAGAACAAATCAAACTCTACCATCGAATCCAATACCAACAATATCAACAA
CATCAGAGATATCTTCAACAACAACAAGTCCAACACAACAATTACAATCA
ACAACCTACTCAACAAAATCCAGGGTCGCCCTCCACTTATCAGCCTCCAA
ACTCGATGATGTTGTCACCACCTCTAACACCAACTCATCCAGCTAGCTAT
CAACCAGCGTTCCAGACTGACAACTATCACCAGAGTGTACCATCACCTTC
TGTAAACAGACATCATCCATATTCTCCAGCGGCCTCAAGCAGTACCAGAT
CTGACCAGATCTCACACCGCCCTCAATTTCAATGTCAGTCATATCCAACG
CCAACAACCGAATTGGAGAATTCCTCTTTCGATTTCAGCCATTTATCACC
TACAACTCAATACGAAATGAAAAGAATCTCAAGACATAACGTCATCTCTA
AACTCCGTCACATTCAAGAAGTCAAACAACAAAAACAACTTCACCAAGAA
AAAATGGAACGTCTTGATCGACTCGATCGCGCCCTTCGCTTTCAAGAGGA
AAAACAATTACGTCAAATTACTCCCAACGCCCTTAATCAACACCCTGCGG
ACACTCTAACAGCTTTCCAACTAGCTTCGCCTGATAGTGGGCGTGGTAGC
ATTGAAGACTTGAACGATTGTAAAGCATCAGACGAAAACAATAATGAAAT
AGACTTCCATTTTGAAACGAATTCGGCCCCACTTCTGGATGTCGATAAAA
CAGGCCCCGTGGATCCAACAAATGCATGTCCGGGAATCAAACTGGCAGAG
CAGAAATGTTTAATTAAGCCAGCAGGTAATAGATGTCATACGAAATTACA
AGCTTGGAGGTCGCGCATGGATGACGAGGCGACCGAAGGGGCTGGGGACG
AGTCAAACGAAAATACTGGCATGGGTGAGAAAGTAAACACGCATGATAAC
CCTTATCTTGACGCTCCGTCACCCGGCAATTTGGTTATTGATGAATGAGG
ATCTTGATAGACTTATAAAATGTTGTTTTAGTTTATATTCTTTGATTTAA
AAGAACCTGTTATTTAGTTTTCATTTCTCCGATCTCAACTTTTTTTATAT
TTATATTTTTATTTTATATTTTGATATAAAAGACTATTTTACAGGGATGC
TAGTATATTATTCCTCTTTTCAACAAAACTATAATTTTTCTGGTGTTGCT
TAGGAGGTAGCTTTCCCGTTTGTTGTGTTTTATCTGCATTTTCTCGTTGT
TTATGATACTTTCTTAGAAGTTCTGTACGGAGACAGGGTGCCTCTGAATG
ATCAAATTCTTGATTATGAATGCTTAAAACTGACCCCTTTAAAGTCTTTG
AAACCCTCTGTCTCTAATAATTGAATCCTTTTAAGGAGTTCAAATTTATT
CCACATTAGTAATACAGTGTCGCTTGTATTTCCACCCCTTTACCCACGAT
ACCCGCCCCTCCCTATTGCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00029693TCONS_00029693Clytia hemisphaericatranscript
TCONS_00029692TCONS_00029692Clytia hemisphaericatranscript
TCONS_00029691TCONS_00029691Clytia hemisphaericatranscript
TCONS_00029690TCONS_00029690Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00029693-proteinTCONS_00029693-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000763supercontigsc0000763:151254..159523 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.54	5.71	1.28	0.73	39.66	32.14	19.24	25.12	6.13	8.89	7.44	5.92	6.23	7.06	8.75	12.63	6.23	6.27	2.36	2.08	4.87	6.17	11.85	9.33	8.03	7.78	2.81	2.32	8.97	9.73