TCONS_00029693 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029693
Unique NameTCONS_00029693
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2945

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029693 ID=TCONS_00029693|Name=TCONS_00029693|organism=Clytia hemisphaerica|type=transcript|length=2945bp
ccggggctggagacaggggtgtataagagcacgaatccgttagtagATGC
CTTAGATTCTAAGCTTGGTCAAATTAGTCTCATTAAGGgttgtaaaattc
acaaaattttccaatttttccttctatttagtcccgctaagggtcgggcg
gcacatacccgtcagctaCCTAGTGGCCTGGTAATAATTCTCATCAGTCT
GGGaatttttcgtcactttctttttaatttgttgTCATACCAACCAAGAT
TATGTTTAAGATTTTAGTGTTTATCTAATTTCAGCAACaaagagaaaata
aataatGTCAGAAGAAAACGCAAATTTAACGCAGGAGTTATCACATCACA
ACGAGCCTGCTATTTCAGCAAGGGAACCTCCTCAAAAGCAATCAATCCCT
CAGGGAATCTCTACCAACAATCAATCACAGGAATCACCTCAGGAATCATC
AGCTGGTCAAGGTATCATCTCTACAAATTATCCAGTAATTACAAACATAT
CTCAAATCAATCGAAGCCGTGTAACTAACACAGACGTCGTGGAGATTGAA
GTTCCGAGTAGTAACGAAACTGTTCAAATCAAATCGTACACATCGCTCAA
TAGTCTTCCAGGGGCGTCCTACAGACCAACTCCTTCGAGTCAGTTTTCGA
CAATGGCTGTAACagatcaacatcaaaacatgcCGAACCTTGAGCATTCA
TCCTCGATACATTGCAACATGAATGAGAAGTCTAGAAAACCAACCACGTT
ACCTCAAACTTCTTTGTACGACAACAACaccaaacaaaatcaaatttatc
aacaacAGACACCAAACGACGGTAGTCCAAACCAACAACCGCATCAAACG
CACCAATTACGGTCGCCAATCTATAAGGAACAGTTATCGTTCCCTCAAAC
TCCTCAAATGAACACACAACGAAACTATCAGATGCCGCCCACTCCTACTA
CGCCGTTAACGCCAACGCCATTCATCAACAATGATGACGTAATCGCTAAT
TCGCCATATTACAATGACAAATACATGACGTCAGAGCTCGCGATGACCGC
GCGGGCCTACGAGTTGCAACTACTGAGACATCAAGAACAGCTATATGAAG
AGGCTTGCCAAATGAATCGAATCAAGTTCTACAACGATTTTCAACAGCAA
GGTTACGTGCCACCGCAATACGCGAACCTTAACTCGCACTCAACCCCCAA
CACACATCTTCAGTCGCCAACCAGTTCGTCCTCACAGCATACTTTTCATT
ACGGTGGCCAACGATCACCTTCGGTGGCCCATCAACAAAAACTTCAACGT
GCAATGGAGAAACAGAAGAAAACTCAACAACGCCAGCAACGAAAAAATAG
ATCTGTTTTAGATCCGTCGCATATTCAAAACGGAATTGTTCCATCAACAA
CTCAAGGCCATCGTAACCAACAACAGCAGAAAGAACACGAGAAATTATAT
ATGGAAAGACTCGAGAAACAGCGTCAAGAACAAATCAAACTCTACCATCG
AATCCAATACCAACAATATCAACAACATCAGAGATatcttcaacaacaac
aagtcCAACACAACAATTACAATCAACAACCTACTCAACAAAATCCAGGG
TCGCCCTCCACTTATCAGCCTCCAAACTCGATGATGTTGTCACCACCTCT
AACACCAACTCATCCAGCTAGCTATCAACCAGCGTTCCAGACTGACAACT
ATCACCAGAGTGTACCATCACCTTCTGTAAACAGACATCATCCATATTCT
CCAGCGGCCTCAAGCAGTACCAGATCTGACCAGATCTCACACCGCCCTCA
ATTTCAATGTCAGTCATATCCAACGCCAACAACCGAATTGGAGAATTCCT
CTTTCGATTTCAGCCATTTATCACCTACAACTCAATACGAAATGAAAAGA
ATCTCAAGACATAACGTCATCTCTAAACTCCGTCACATTCAAGAAgtcaa
acaacaaaaacaacttcACCAAGAAAAAATGGAACGTCTTGATCGACTCG
ATCGCGCCCTTCGCTTTCAAGAGGAAAAACAATTACGTCAAATTACTCCC
AACGCCCTTAATCAACACCCTGCGGACACTCTAACAGCTTTCCAACTAGC
TTCGCCTGATAGTGGGCGTGGTAGCATTGAAGACTTGAACGATTGTAAAG
CATCAGACGAAAACAATAATGAAATAGACTTCCATTTTGAAACGAATTCG
GCCCCACTTCTGGATGTCGATAAAACAGGCCCCGTGGATCCAACAAATGC
ATGTCCGGGAATCAAACTGGCAGAGCAGAAATGTTTAATTAAGCCAGCAG
GTAATAGATGTCATACGAAATTACAAGCTTGGAGGTCGCGCATGGATGAC
GAGGCGACCGAAGGGGCTGGGGACGAGTCAAACGAAAATACTGGCATGGG
TGAGAAAGTAAACACGCATGATAACCCTTATCTTGACGCTCCGTCACCCG
GCAATTTGGTTATTGATGAATGAGGATCTTGATAGACTTATAAAATGTTG
TTTTAGTTTATATTCTTTGATTTAAAAGAACCTGTTATTTAGTTTTCATT
TCTCCGAtctcaactttttttatatttatatttttattttatattttgat
ataaaagACTATTTTACAGGGATGCTAGTATATTATTCCTCTTTTCAACA
AAACTATAATTTTTCTGGTGTTGCTTAGGAGGTAGCTTTCCCGTTTGTTG
TGTTTTATCTGCATTTTCTCGTTGTTTATGATACTTTCTTAGAAGTTCTG
TACGGAGACAGGGTGCCTCTGAATGATCAAATTCTTGATTATGAATGCTT
AAAACTGACCCCTTTAAAGTCTTTGAAACCCTCTGTCTCTAATAATTGAA
TCCTTTTAAGGAGTTCAAATTTATTCCACATTAGTAATACAGTGTCGCTT
GTATTTCCACCCCTTTACCCACGATACCCGCCCCTCCCTATTGCC
Run BLAST on NCBI

protein sequence of TCONS_00029693-protein

>TCONS_00029693-protein ID=TCONS_00029693-protein|Name=TCONS_00029693-protein|organism=Clytia hemisphaerica|type=polypeptide|length=722bp
MSEENANLTQELSHHNEPAISAREPPQKQSIPQGISTNNQSQESPQESSA
GQGIISTNYPVITNISQINRSRVTNTDVVEIEVPSSNETVQIKSYTSLNS
LPGASYRPTPSSQFSTMAVTDQHQNMPNLEHSSSIHCNMNEKSRKPTTLP
QTSLYDNNTKQNQIYQQQTPNDGSPNQQPHQTHQLRSPIYKEQLSFPQTP
QMNTQRNYQMPPTPTTPLTPTPFINNDDVIANSPYYNDKYMTSELAMTAR
AYELQLLRHQEQLYEEACQMNRIKFYNDFQQQGYVPPQYANLNSHSTPNT
HLQSPTSSSSQHTFHYGGQRSPSVAHQQKLQRAMEKQKKTQQRQQRKNRS
VLDPSHIQNGIVPSTTQGHRNQQQQKEHEKLYMERLEKQRQEQIKLYHRI
QYQQYQQHQRYLQQQQVQHNNYNQQPTQQNPGSPSTYQPPNSMMLSPPLT
PTHPASYQPAFQTDNYHQSVPSPSVNRHHPYSPAASSSTRSDQISHRPQF
QCQSYPTPTTELENSSFDFSHLSPTTQYEMKRISRHNVISKLRHIQEVKQ
QKQLHQEKMERLDRLDRALRFQEEKQLRQITPNALNQHPADTLTAFQLAS
PDSGRGSIEDLNDCKASDENNNEIDFHFETNSAPLLDVDKTGPVDPTNAC
PGIKLAEQKCLIKPAGNRCHTKLQAWRSRMDDEATEGAGDESNENTGMGE
KVNTHDNPYLDAPSPGNLVIDE
Run BLAST on NCBI

transcript from alignment at sc0000763:151254..159523-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029693 ID=TCONS_00029693|Name=TCONS_00029693|organism=Clytia hemisphaerica|type=transcript|length=8270bp|location=Sequence derived from alignment at sc0000763:151254..159523- (Clytia hemisphaerica)
CCGGGGCTGGAGACAGGGGTGTATAAGAGCACGAATCCGTTAGTAGATGC
CTTAGATTCTAAGCTTGGTCAAATTAGTCTCATTAAGGGTTGTAAAATTC
ACAAAATTTTCCAATTTTTCCTTCTATTTAGTCCCGCTAAGGGTCGGGCG
GCACATACCCGTCAGCTACCTAGTGGCCTGGTAATAATTCTCATCAGTCT
GGGAATTTTTCGTCACTTTCTTTTTAATTTGTTGTCATACCAACCAAGAT
TATGTTTAAGATTTTAGTGTTTATCTAATTTCAGCAACAAAGAGAAAATA
AATAATGTCAGAAGAAAACGCAAATTTAACGCAGGAGTTATCACATCACA
ACGAGCCTGCTATTTCAGCAAGGGAACCTCCTCAAAAGCAATCAATCCCT
CAGGGAATCTCTACCAACAATCAATCACAGGAATCACCTCAGGAATCATC
AGCTGGTCAAGGTATCATCTCTACAAATTATCCAGTAATTACAAACATAT
CTCAAATCAATCGAAGCCGTGTAACTAACACAGACGTCGTGGAGATTGAA
GTTCCGAGTAGTAACGAAACTGTTCAAATCAAATCGTACACATCGCTCAA
TAGTCTTCCAGGGGCGTCCTACAGACCAACTCCTTCGAGTCAGTTTTCGA
CAATGGCTGTAACAGATCAACATCAAAACATGCCGAACCTTGAGCATTCA
TCCTCGATACATTGCAACATGAATGAGAAGTCTAGAAAACCAACCACGTT
ACCTCAAACTTCTTTGTAAGTAAATGCGAACTTCTATTTTTCTCTGATTC
GAAGAAAAGTATATATATACTCCCTTGTTGAAGATCGAATTAGTAAGAGT
CAACCTGAACAGTTTTTCCCATCTGTCTCTCTGAGTACTGAGCTCTTCGA
TTTTCCCGGATTTTTCCCACTCAAAAGTCTTTGGCTCGTTTTCAGCGTTA
AACTCTGTTAAGTTCCACATTTTTGTACACTGATTTCTAACCTTCTTCTA
CCCATCCTCCAGAAAAAAAGTTTTCTTATTAGGAAGTACGTATCAGGCAG
TATGTCTACAGAGGTCTGCGATTCAGACGCTTTTTTTATAAGAATACAGT
TTATAAGAATGTCCATAATGAAAATGGCCAAACAATTAAGAATATAGTAG
GGGGAAATTTGTAAAATCGCTCGATTTTTTTAGTCAAAGCACTTGTTATA
CATTTTTGGAAAGCTAAGGGGTAGGTAGCTGGGAGACCCGGCTACAATGT
CCGTGTGGTTTTGAGGTATAGCATTTAGTTCGAGCAGAAAATATCAGAGT
TTTGACATAGTAGCCGGGAATTATTGAAGATGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGCCAA
TTTTTTTTCGGACACTTTGGTGTGATTTTCGGACAAATACGACGGTGTCA
GGCAAAAATCATAGGGTGAAAAATTAATGAAAATTTTAGCTGGAGGAAAC
GGAGACCTGTTGTATATTTTTGGAAAGCTCTCAAAAAAATAAGATTAGAA
ATATATTGCGAGAATAAGTGATTTCAGTACCTAACTCGAGATATTGTATT
GAGCTTCTAAAAGCGCAAAAACTGGACAAAACAGCTGTTTCTGGCTGAAA
AACACTGTTTTTAAGGATTAATATCTCGAGTTAGGTAAATAAATCACCTA
TACTCGCAATATATCACTAATCTTGATTTTTTGAGAGCTTTCCAAAAATA
TACAACAGGTCTCCGTTTTCTCAAGCTAAAATTTTCATTAATTTTTCACC
CTATGATTTTTGCCTGAGACCGTCGTATTTGTCCGAAAATCACACCAAAG
TGTCCGAGAAAAAAATTGGCACCCAATTTATTTTGATTCCCCTACCCCTT
AGTAGCTTTCCAAAAATGTATAACAAGTGCTTTGACTAAAAAAGTCGAGC
GACCTCAAAAAAAACGAACAAATTTCCCCCTACTAATATGGTAAGAATAT
CACCATCATGGAATTTAGCAACTGAACCTAAGAATGCCATTTTTTAAGCA
TTTTCATCAATAATACCCCAGTAACGCTCAATATTCTCCAGGCGTGTATT
ACATGGTAAAATCTAGGTTAATTTCGATCTTTATCTAAGAATACTTTAAT
AATATTTTTGGATGATTTTCGACAAAAAGTTAAGAATATCCATGATGAAA
TGAAAATGCACCATTCTTATAAAAAAAGCGTTTTTAGTTGTCTTGCCAAC
ATTTTGATGGAAAGAAAAGTAAAATAATACGAAGTTATAAAGATAAAAGG
ACTTTAAAGTCTGTCTAATCTAGTACACTTTTCTTTTTACAAGAACCATT
AAGCTTTTGGCACTTGAGTCTCAAATTGTTATCATATTCTTATTTATAGG
GTTTAATTGGTGTATTTGAGGCTCTTACTCAATTCTTTTCCATTTTGACC
GCTGAATTGCTTGAAATTGGGTAATTCCAGGCTCAGCATTGTTCNCCACG
TTACCTCAAACCTCTGTGTAAGTAAATGCAATCAGCTCTCTCTAATTCGA
ACTTCTATTTTTCTCTGATTCGAAGAAAAGTATATACACGCTTTTTTTAT
ATAAGAATACAGTTTATAAGAATGACCATAATGAAAATGGCCAAAAATTT
AAGAATATGGTAAGAATATCACCATCATGGAATTTAGCAACTGAAACTAA
GAATGCCATTTTTTAAGCATTTTCATCAATAATAGCCCAGTAACGCTCAA
TATTCTCCAGGCGTGTATTACATGGTAAAACCTAGGTTAATTTTCGATCT
TTACCTAAGAACACCGTAAGAATATTTTAGGATGATTTTTGACAAAAAAT
TAAGAATATCCATGATGAAATGAAAATGCACCATTCTTATAAAAAAAGCG
TGTACTTTTTAGTTGTCTTGCCAACTAAAATAATACGAAGTTATAAAAGA
TAAAAGGACTTTAAAGTCTGTCTAATCTAGCACACTTTTCTTTTTATAAG
AACCATTAAACTTTTGGCACTTGAGTCTCAAATTGTTATCATATTCTTAT
TTTATAGGGTTTAATTGATGTATTTGAGGCTCTTTACTCAATTCTTTTCC
ATTTTGACCGCTGAATTGCTTGAAATTGATTAATTCCGGGCTCAGCATTG
TTCTTAAACCCATTGACCTTTTACATAGTTATAATGTATGTTGATTCAGC
AGATTGAAATTAATAGAATGTTTTGTAATGAATAAAGAAAAATGTGGAGC
AAGATTTTTTTCTTCCTTTTATTTACAAATTTGGAAGGACTCTTTTATTA
AAATTTTGCTGACATCAGTTTCAGACGAGTCGGGTGTATATAACACCGTA
TAATTCCTTTAATCTTTGAGCCTCATTTCTTTATAAAAGACTGTATTCCT
TTGATCCTGAATATGATTTGAATTATTTTCTCTTTTCACTTAGGTACGAC
AACAACACCAAACAAAATCAAATTTATCAACAACAGACACCAAACGACGG
TAGTCCAAACCAACAACCGCATCAAACGCACCAATTACGGTCGCCAATCT
ATAAGGAACAGTTATCGTTCCCTCAAACTCCTCAAATGAACACACAACGA
AACTATCAGATGCCGCCCACTCCTACTACGCCGTTAACGCCAACGCCATT
CATCAACAATGATGACGTAATCGCTAATTCGCCATATTACAATGACAAAT
ACATGACGTCAGAGCTCGCGATGACCGCGCGGGCCTACGAGTTGCAACTA
CTGAGACATCAAGAACAGCTATATGAAGAGGCTTGCCAAATGAATCGAAT
CAAGTTCTACAACGATTTTCAACAGCAAGGTTACGTGCCACCGCAATACG
CGAACCTTAACTCGCACTCAACCCCCAACACACATCTTCAGTCGCCAACC
AGTTCGTCCTCACAGCATACTTTTCATTACGGTGGCCAACGATCACCTTC
GGTGGCCCATCAACAAAAACTTCAACGTGCAATGGAGAAACAGAAGAAAA
CTCAACAACGCCAGCAACGAAAAAATAGATCTGTTTTAGATCCGTCGCAT
ATTCAAAACGGAATTGTTCCATCAACAACTCAAGGCCATCGTAACCAACA
ACAGCAGAAAGAACACGAGAAATTATATATGGAAAGACTTGAGAAACAGC
GTCAAGAACAAATCAAACTCTACCATCGAATCCAATACCAACAATATCAA
CAACATCAGAGATATCTTCAACAACAACAAGTCCAACTCAACAATTACAA
TCAACAACCTACTCAACAAAATCCAGGGTCGCCCTCCACTTATCAGCCTC
CAAACTCGATGATGTTGTCACCACCTTTAACACCAACTCAACCAGCTAGC
TATCAACCAGCGTTCCAGACTGACAACTATCACCAGAGTGTACCATCACC
TTCTGTAAACAGATATCATCCATATTCTCCAGCGGCCTCAAGCAGTACCA
GATCTCACCAGATCTCACACCGCCCTCAATTTCAATGTCAGCCATATCCA
ACGCCAACAACCGAATTGGAGAATTCCTCTTTCGATTTCAGCCATTTATC
ACCTGNTGACATCAGTTTCAGACGAGTCGGGTGTATATAACACCGTATAA
TTCCTTTAATCTTTGAGCCTCATTTCTTTATAAAAGACTGTATTCCTTTG
ATCCTGAATATGATTTGAATTATTTTCTCTTTTCACTTAGGTACGACAAC
AACACCAAACAAAATCAAATTTATCAACAACAGACACCAAACGACGGTAG
TCCAAACCAACAACCGCATCAAACGCACCAATTACGGTCGCCAATCTATA
AGGAACAGTTATCGTTCCCTCAAACTCCTCAAATGAACACACAACGAAAC
TATCAGATGCCGCCCACTCCTACTACGCCGTTAACGCCAACGCCATTCAT
CAACAATGATGACGTAATCGCTAATTCGCCATATTACAATGACAAATACA
TGACGTCAGAGCTCGCGATGACCGCGCGGGCCTACGAGTTGCAACTACTG
AGACATCAAGAACAGCTATATGAAGAGGCTTGCCAAATGAATCGAATCAA
GTTCTACAACGATTTTCAACAGCAAGGTTACGTGCCACCGCAATACGCGA
ACCTTAACTCGCACTCAACCCCCAACACACATCTTCAGTCGCCAACCAGT
TCGTCCTCACAGCATACTTTTCATTACGGTGGCCAACGATCACCTTCGGT
GGCCCATCAACAAAAACTTCAACGTGCAATGGAGAAACAGAAGAAAACTC
AACAACGCCAGCAACGAAAAAATAGATCTGTTTTAGATCCGTCGCATATT
CAAAACGGAATTGTTCCATCAACAACTCAAGGCCATCGTAACCAACAACA
GCAGAAAGAACACGAGAAATTATACATGGAAAGACTCGAGAAACAGCGTC
AAGAACAAATCAAACTCTACCATCGAATCCAATACCAACAATATCAACAA
CATCAGAGATATCTTCAACAACAACAAGTCCAACACAACAATTACAATCA
ACAACCTACTCAACAAAATCCAGGGTCGCCCTCCACTTATCAGCCTCCAA
ACTCGATGATGTTGTCACCACCTCTAACACCAACTCATCCAGCTAGCTAT
CAACCAGCGTTCCAGACTGACAACTATCACCAGAGTGTACCATCACCTTC
TGTAAACAGACATCATCCATATTCTCCAGCGGCCTCAAGCAGTACCAGAT
CTGACCAGATCTCACACCGCCCTCAATTTCAATGTCAGTCATATCCAACG
CCAACAACCGAATTGGAGAATTCCTCTTTCGATTTCAGCCATTTATCACC
TACAACTCAATACGAAATGAAAAGAATCTCAAGACATAACGTCATCTCTA
AACTCCGTCACATTCAAGAAGTCAAACAACAAAAACAACTTCACCAAGAA
AAAATGGAACGTCTTGATCGACTCGATCGCGCCCTTCGCTTTCAAGAGGA
AAAACAATTACGTCAAATTACTCCCAACGCCCTTAATCAACACCCTGCGG
ACACTCTAACAGCTTTCCAACTAGCTTCGCCTGATAGTGGGCGTGGTAGC
ATTGAAGACTTGAACGATTGTAAAGCATCAGACGAAAACAATAATGAAAT
AGACTTCCATTTTGAAACGAATTCGGCCCCACTTCTGGATGTCGATAAAA
CAGGCCCCGTGGATCCAACAAATGCATGTCCGGGAATCAAACTGGCAGAG
CAGAAATGTTTAATTAAGCCAGCAGGTAATAGATGTCATACGAAATTACA
AGCTTGGAGGTCGCGCATGGATGACGAGGCGACCGAAGGGGCTGGGGACG
AGTCAAACGAAAATACTGGCATGGGTGAGAAAGTAAACACGCATGATAAC
CCTTATCTTGACGCTCCGTCACCCGGCAATTTGGTTATTGATGAATGAGG
ATCTTGATAGACTTATAAAATGTTGTTTTAGTTTATATTCTTTGATTTAA
AAGAACCTGTTATTTAGTTTTCATTTCTCCGATCTCAACTTTTTTTATAT
TTATATTTTTATTTTATATTTTGATATAAAAGACTATTTTACAGGGATGC
TAGTATATTATTCCTCTTTTCAACAAAACTATAATTTTTCTGGTGTTGCT
TAGGAGGTAGCTTTCCCGTTTGTTGTGTTTTATCTGCATTTTCTCGTTGT
TTATGATACTTTCTTAGAAGTTCTGTACGGAGACAGGGTGCCTCTGAATG
ATCAAATTCTTGATTATGAATGCTTAAAACTGACCCCTTTAAAGTCTTTG
AAACCCTCTGTCTCTAATAATTGAATCCTTTTAAGGAGTTCAAATTTATT
CCACATTAGTAATACAGTGTCGCTTGTATTTCCACCCCTTTACCCACGAT
ACCCGCCCCTCCCTATTGCC

Coding sequence (CDS) from alignment at sc0000763:151254..159523-

>TCONS_00029693 ID=TCONS_00029693|Name=TCONS_00029693|organism=Clytia hemisphaerica|type=CDS|length=6507bp|location=Sequence derived from alignment at sc0000763:151254..159523- (Clytia hemisphaerica)
ATGGAAAGACTCGAGAAACAGCGTCAAGAACAAATCAAACTCTACCATCG
AATCCAATACCAACAATATCAACAACATCAGAGATATCTTCAACAACAAC
AAGTCCAACACAACAATTACAATCAACAACCTACTCAACAAAATCCAGGG
TCGCCCTCCACTTATCAGCCTCCAAACTCGATGATGTTGTCACCACCTCT
AACACCAACTCATCCAGCTAGCTATCAACCAGCGTTCCAGACTGACAACT
ATCACCAGAGTGTACCATCACCTTCTGTAAACAGACATCATCCATATTCT
CCAGCGGCCTCAAGCAGTACCAGATCTGACCAGATCTCACACCGCCCTCA
ATTTCAATGTCAGTCATATCCAACGCCAACAACCGAATTGGAGAATTCCT
CTTTCGATTTCAGCCATTTATCACCTACAACTCAATACGAAATGAAAAGA
ATCTCAAGACATAACGTCATCTCTAAACTCCGTCACATTCAAGAAGTCAA
ACAACAAAAACAACTTCACCAAGAAAAAATGGAACGTCTTGATCGACTCG
ATCGCGCCCTTCGCTTTCAAGAGGAAAAACAATTACGTCAAATTACTCCC
AACGCCCTTAATCAACACCCTGCGGACACTCTAACAGCTTTCCAACTAGC
TTCGCCTGATAGTGGGCGTGGTAGCATTGAAGACTTGAACGATTGTAAAG
CATCAGACGAAAACAATAATGAAATAGACTTCCATTTTGAAACGAATTCG
GCCCCACTTCTGGATGTCGATAAAACAGGCCCCGTGGATCCAACAAATGC
ATGTCCGGGAATCAAACTGGCAGAGCAGAAATGTTTAATTAAGCCAGCAG
GTAATAGATGTCATACGAAATTACAAGCTTGGAGGTCGCGCATGGATGAC
GAGGCGACCGAAGGGGCTGGGGACGAGTCAAACGAAAATACTGGCATGGG
TGAGAAAGTAAACACGCATGATAACCCTTATCTTGACGCTCCGTCACCCG
GCAATTTGGTTATTGATGAATGAGTACGACAACAACACCAAACAAAATCA
AATTTATCAACAACAGACACCAAACGACGGTAGTCCAAACCAACAACCGC
ATCAAACGCACCAATTACGGTCGCCAATCTATAAGGAACAGTTATCGTTC
CCTCAAACTCCTCAAATGAACACACAACGAAACTATCAGATGCCGCCCAC
TCCTACTACGCCGTTAACGCCAACGCCATTCATCAACAATGATGACGTAA
TCGCTAATTCGCCATATTACAATGACAAATACATGACGTCAGAGCTCGCG
ATGACCGCGCGGGCCTACGAGTTGCAACTACTGAGACATCAAGAACAGCT
ATATGAAGAGGCTTGCCAAATGAATCGAATCAAGTTCTACAACGATTTTC
AACAGCAAGGTTACGTGCCACCGCAATACGCGAACCTTAACTCGCACTCA
ACCCCCAACACACATCTTCAGTCGCCAACCAGTTCGTCCTCACAGCATAC
TTTTCATTACGGTGGCCAACGATCACCTTCGGTGGCCCATCAACAAAAAC
TTCAACGTGCAATGGAGAAACAGAAGAAAACTCAACAACGCCAGCAACGA
AAAAATAGATCTGTTTTAGATCCGTCGCATATTCAAAACGGAATTGTTCC
ATCAACAACTCAAGGCCATCGTAACCAACAACAGCAGAAAGAACACGAGA
AATTATATATGTCAGAAGAAAACGCAAATTTAACGCAGGAGTTATCACAT
CACAACGAGCCTGCTATTTCAGCAAGGGAACCTCCTCAAAAGCAATCAAT
CCCTCAGGGAATCTCTACCAACAATCAATCACAGGAATCACCTCAGGAAT
CATCAGCTGGTCAAGGTATCATCTCTACAAATTATCCAGTAATTACAAAC
ATATCTCAAATCAATCGAAGCCGTGTAACTAACACAGACGTCGTGGAGAT
TGAAGTTCCGAGTAGTAACGAAACTGTTCAAATCAAATCGTACACATCGC
TCAATAGTCTTCCAGGGGCGTCCTACAGACCAACTCCTTCGAGTCAGTTT
TCGACAATGGCTGTAACAGATCAACATCAAAACATGCCGAACCTTGAGCA
TTCATCCTCGATACATTGCAACATGAATGAGAAGTCTAGAAAACCAACCA
CGTTACCTCAAACTTCTTTATGGAAAGACTCGAGAAACAGCGTCAAGAAC
AAATCAAACTCTACCATCGAATCCAATACCAACAATATCAACAACATCAG
AGATATCTTCAACAACAACAAGTCCAACACAACAATTACAATCAACAACC
TACTCAACAAAATCCAGGGTCGCCCTCCACTTATCAGCCTCCAAACTCGA
TGATGTTGTCACCACCTCTAACACCAACTCATCCAGCTAGCTATCAACCA
GCGTTCCAGACTGACAACTATCACCAGAGTGTACCATCACCTTCTGTAAA
CAGACATCATCCATATTCTCCAGCGGCCTCAAGCAGTACCAGATCTGACC
AGATCTCACACCGCCCTCAATTTCAATGTCAGTCATATCCAACGCCAACA
ACCGAATTGGAGAATTCCTCTTTCGATTTCAGCCATTTATCACCTACAAC
TCAATACGAAATGAAAAGAATCTCAAGACATAACGTCATCTCTAAACTCC
GTCACATTCAAGAAGTCAAACAACAAAAACAACTTCACCAAGAAAAAATG
GAACGTCTTGATCGACTCGATCGCGCCCTTCGCTTTCAAGAGGAAAAACA
ATTACGTCAAATTACTCCCAACGCCCTTAATCAACACCCTGCGGACACTC
TAACAGCTTTCCAACTAGCTTCGCCTGATAGTGGGCGTGGTAGCATTGAA
GACTTGAACGATTGTAAAGCATCAGACGAAAACAATAATGAAATAGACTT
CCATTTTGAAACGAATTCGGCCCCACTTCTGGATGTCGATAAAACAGGCC
CCGTGGATCCAACAAATGCATGTCCGGGAATCAAACTGGCAGAGCAGAAA
TGTTTAATTAAGCCAGCAGGTAATAGATGTCATACGAAATTACAAGCTTG
GAGGTCGCGCATGGATGACGAGGCGACCGAAGGGGCTGGGGACGAGTCAA
ACGAAAATACTGGCATGGGTGAGAAAGTAAACACGCATGATAACCCTTAT
CTTGACGCTCCGTCACCCGGCAATTTGGTTATTGATGAATGAGTACGACA
ACAACACCAAACAAAATCAAATTTATCAACAACAGACACCAAACGACGGT
AGTCCAAACCAACAACCGCATCAAACGCACCAATTACGGTCGCCAATCTA
TAAGGAACAGTTATCGTTCCCTCAAACTCCTCAAATGAACACACAACGAA
ACTATCAGATGCCGCCCACTCCTACTACGCCGTTAACGCCAACGCCATTC
ATCAACAATGATGACGTAATCGCTAATTCGCCATATTACAATGACAAATA
CATGACGTCAGAGCTCGCGATGACCGCGCGGGCCTACGAGTTGCAACTAC
TGAGACATCAAGAACAGCTATATGAAGAGGCTTGCCAAATGAATCGAATC
AAGTTCTACAACGATTTTCAACAGCAAGGTTACGTGCCACCGCAATACGC
GAACCTTAACTCGCACTCAACCCCCAACACACATCTTCAGTCGCCAACCA
GTTCGTCCTCACAGCATACTTTTCATTACGGTGGCCAACGATCACCTTCG
GTGGCCCATCAACAAAAACTTCAACGTGCAATGGAGAAACAGAAGAAAAC
TCAACAACGCCAGCAACGAAAAAATAGATCTGTTTTAGATCCGTCGCATA
TTCAAAACGGAATTGTTCCATCAACAACTCAAGGCCATCGTAACCAACAA
CAGCAGAAAGAACACGAGAAATTATATATGTCAGAAGAAAACGCAAATTT
AACGCAGGAGTTATCACATCACAACGAGCCTGCTATTTCAGCAAGGGAAC
CTCCTCAAAAGCAATCAATCCCTCAGGGAATCTCTACCAACAATCAATCA
CAGGAATCACCTCAGGAATCATCAGCTGGTCAAGGTATCATCTCTACAAA
TTATCCAGTAATTACAAACATATCTCAAATCAATCGAAGCCGTGTAACTA
ACACAGACGTCGTGGAGATTGAAGTTCCGAGTAGTAACGAAACTGTTCAA
ATCAAATCGTACACATCGCTCAATAGTCTTCCAGGGGCGTCCTACAGACC
AACTCCTTCGAGTCAGTTTTCGACAATGGCTGTAACAGATCAACATCAAA
ACATGCCGAACCTTGAGCATTCATCCTCGATACATTGCAACATGAATGAG
AAGTCTAGAAAACCAACCACGTTACCTCAAACTTCTTTATGGAAAGACTC
GAGAAACAGCGTCAAGAACAAATCAAACTCTACCATCGAATCCAATACCA
ACAATATCAACAACATCAGAGATATCTTCAACAACAACAAGTCCAACACA
ACAATTACAATCAACAACCTACTCAACAAAATCCAGGGTCGCCCTCCACT
TATCAGCCTCCAAACTCGATGATGTTGTCACCACCTCTAACACCAACTCA
TCCAGCTAGCTATCAACCAGCGTTCCAGACTGACAACTATCACCAGAGTG
TACCATCACCTTCTGTAAACAGACATCATCCATATTCTCCAGCGGCCTCA
AGCAGTACCAGATCTGACCAGATCTCACACCGCCCTCAATTTCAATGTCA
GTCATATCCAACGCCAACAACCGAATTGGAGAATTCCTCTTTCGATTTCA
GCCATTTATCACCTACAACTCAATACGAAATGAAAAGAATCTCAAGACAT
AACGTCATCTCTAAACTCCGTCACATTCAAGAAGTCAAACAACAAAAACA
ACTTCACCAAGAAAAAATGGAACGTCTTGATCGACTCGATCGCGCCCTTC
GCTTTCAAGAGGAAAAACAATTACGTCAAATTACTCCCAACGCCCTTAAT
CAACACCCTGCGGACACTCTAACAGCTTTCCAACTAGCTTCGCCTGATAG
TGGGCGTGGTAGCATTGAAGACTTGAACGATTGTAAAGCATCAGACGAAA
ACAATAATGAAATAGACTTCCATTTTGAAACGAATTCGGCCCCACTTCTG
GATGTCGATAAAACAGGCCCCGTGGATCCAACAAATGCATGTCCGGGAAT
CAAACTGGCAGAGCAGAAATGTTTAATTAAGCCAGCAGGTAATAGATGTC
ATACGAAATTACAAGCTTGGAGGTCGCGCATGGATGACGAGGCGACCGAA
GGGGCTGGGGACGAGTCAAACGAAAATACTGGCATGGGTGAGAAAGTAAA
CACGCATGATAACCCTTATCTTGACGCTCCGTCACCCGGCAATTTGGTTA
TTGATGAATGAGTACGACAACAACACCAAACAAAATCAAATTTATCAACA
ACAGACACCAAACGACGGTAGTCCAAACCAACAACCGCATCAAACGCACC
AATTACGGTCGCCAATCTATAAGGAACAGTTATCGTTCCCTCAAACTCCT
CAAATGAACACACAACGAAACTATCAGATGCCGCCCACTCCTACTACGCC
GTTAACGCCAACGCCATTCATCAACAATGATGACGTAATCGCTAATTCGC
CATATTACAATGACAAATACATGACGTCAGAGCTCGCGATGACCGCGCGG
GCCTACGAGTTGCAACTACTGAGACATCAAGAACAGCTATATGAAGAGGC
TTGCCAAATGAATCGAATCAAGTTCTACAACGATTTTCAACAGCAAGGTT
ACGTGCCACCGCAATACGCGAACCTTAACTCGCACTCAACCCCCAACACA
CATCTTCAGTCGCCAACCAGTTCGTCCTCACAGCATACTTTTCATTACGG
TGGCCAACGATCACCTTCGGTGGCCCATCAACAAAAACTTCAACGTGCAA
TGGAGAAACAGAAGAAAACTCAACAACGCCAGCAACGAAAAAATAGATCT
GTTTTAGATCCGTCGCATATTCAAAACGGAATTGTTCCATCAACAACTCA
AGGCCATCGTAACCAACAACAGCAGAAAGAACACGAGAAATTATATATGT
CAGAAGAAAACGCAAATTTAACGCAGGAGTTATCACATCACAACGAGCCT
GCTATTTCAGCAAGGGAACCTCCTCAAAAGCAATCAATCCCTCAGGGAAT
CTCTACCAACAATCAATCACAGGAATCACCTCAGGAATCATCAGCTGGTC
AAGGTATCATCTCTACAAATTATCCAGTAATTACAAACATATCTCAAATC
AATCGAAGCCGTGTAACTAACACAGACGTCGTGGAGATTGAAGTTCCGAG
TAGTAACGAAACTGTTCAAATCAAATCGTACACATCGCTCAATAGTCTTC
CAGGGGCGTCCTACAGACCAACTCCTTCGAGTCAGTTTTCGACAATGGCT
GTAACAGATCAACATCAAAACATGCCGAACCTTGAGCATTCATCCTCGAT
ACATTGCAACATGAATGAGAAGTCTAGAAAACCAACCACGTTACCTCAAA
CTTCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016964XLOC_016964Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029693-proteinTCONS_00029693-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029693-exon-sc0000763-1575043694:158759..159523TCONS_00029693-exon-sc0000763-1575043694:158759..159523Clytia hemisphaericaexon
TCONS_00029693-exon-sc0000763-1575043694:153996..154680TCONS_00029693-exon-sc0000763-1575043694:153996..154680Clytia hemisphaericaexon
TCONS_00029693-exon-sc0000763-1575043694:151254..152748TCONS_00029693-exon-sc0000763-1575043694:151254..152748Clytia hemisphaericaexon
TCONS_00029693-exon-sc0000763-1510915933:158759..159523TCONS_00029693-exon-sc0000763-1510915933:158759..159523Clytia hemisphaericaexon
TCONS_00029693-exon-sc0000763-1510915933:153996..154680TCONS_00029693-exon-sc0000763-1510915933:153996..154680Clytia hemisphaericaexon
TCONS_00029693-exon-sc0000763-1510915933:151254..152748TCONS_00029693-exon-sc0000763-1510915933:151254..152748Clytia hemisphaericaexon
TCONS_00029693-exon-sc0000763-1491911889:158759..159523TCONS_00029693-exon-sc0000763-1491911889:158759..159523Clytia hemisphaericaexon
TCONS_00029693-exon-sc0000763-1491911889:153996..154680TCONS_00029693-exon-sc0000763-1491911889:153996..154680Clytia hemisphaericaexon
TCONS_00029693-exon-sc0000763-1491911889:151254..152748TCONS_00029693-exon-sc0000763-1491911889:151254..152748Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000763supercontigsc0000763:151254..159523 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0157441	0.0189949	8.07509e-10	0	4.53864e-05	0.41176	1.37832e-07	0	0	0.00943748	0	0.515318	2.97148e-08	0	1.43076	0.92054	0.000743116	1.92939	0.282418	0.727537	0.145741	0.712352	0.000191221	0.65996	0	0	1.21513	0.786095	9.49779e-07	2.41174e-05
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00029693 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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