XLOC_016944 (gene) - C. hemisphaerica

Overview
NameXLOC_016944
Unique NameXLOC_016944
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000762:146567..152979+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016944 ID=XLOC_016944|Name=XLOC_016944|organism=Clytia hemisphaerica|type=gene|length=6413bp|location=Sequence derived from alignment at sc0000762:146567..152979+ (Clytia hemisphaerica)
TAAAAATTTGGTTTTCATGAGGAAACTCAGCAGAAAAAACGGTAGGTGTA AAGAAccccttttaatcataacttcttttcctcatgatgaatttttatga aattttcagtagagatccataaaattatcattgatatcatgttcaaatat aaGTCATTCTTTTTAAGGctgcaatcacaaatatcttcgttacgcgtcgc ccgaccgactctcaaaaattgagtagaattgagtcggtaaatttgtctga ctttttctgtcaatgacctttccttcgttcaaaaattttatttttgccga GTTTTTCAAGCGATTTCTAGCATTcacagcattttgactttgtttatcat tacatgcgccattttggggtcggaggtcacagtgtCCAAAGGTGATAATT TTAAATCACCCAttacacgcggttgttttggctgctggctggctggcagt ttcctccaGCAAGAATACACTcaaaaaatggatggaaaaatggaaacccg aaaacttttagaccgaccgaccgaccgactggcatgggttgacccgggcg aatgtttgttcacttgccaagtgaaccgttgtgatTGGGAATCGAAACCT TGGTTGCCTGTACAGGACaattagtcacactagcgtcccgccaaaatgcg tatcaaagattaatgctgcgaaagcgccatatcgtttacttgactcgcaa gcaagaaattgcctaaaatttgagccatagatgaaaaagtttgagccaag ccaaccttgaaaactaatttgaagatcaacttcccaagaaaaagatctac ggGGGAGACAGAACCCACCTAGATCCGCGCATGGCCGGATAGGCTaactc ccggaaattttgccggacctcaaacactgacccatttacatgtgcaaaat cttttttactttagcgtataggCCTTAAAGATCAAAGCGCTGTCTCTGGA ATTGAATgataaaatttggttggttgatattctggttACTGCACGTTCAC AAtcagtcattttgtctcattttaagttttcaagtttttattaattgtct tgggaacttgaacttgattcaggtaactctcatccttgttgtttcaaata catcctgtagatgactgatgttgttttttctgaaagctagatttcctagt gtgactaactgcaggaatcaaggttgatgtccactataccacaacgcctt ctaaccttccacagtactgaAGTGCGCAACCTACCGTTTTCATGGTGGAg gaggcgagactcctaaacggtgtattgtccaaaatgaccaaaaaaattga ccctgtcaggccaaaaaaaaaagtagttttgtttccggaaatgcgggtga cgaaaaaaaatctcacccgggcggccggaaaatattttttttttcaattt tcctagaaaaactctaattgacgtgtacgaaaaaataatccaggttcgat gtctctttacttgaaaaaacgaaattttaagaGGAAGCTGTACTCTTAGG TAATTCTATTCACAACAACATAAAACAGGAAAGTAGattgcacaaaaaaa aaagtttttttctatttgcggccgggtgagatatatttttttctaaaaaa agctcacccggccgatttccggaaacaagactacttttttttttggcctc aGGTCcgcatcttgaaaattagtaaattggGGACCCTGTATATACGAGAT ATCTCTAGAGTTTGTCTAAATTAAAATAAAGGGACTCTGATCAGTGGCAC GTCCCTGTGTTCTACCTAATTTTGCCAAAGTGCCCTCCCTCGCCCGGGCT TCTACATGTGCGTTTGCATAGGGTAAAATTGCGAaatacgaaaattgatt tttaaaaaaaaattttgaaaaatgaccctacaagatttgattatatcttt ttattccatgaagagattactttcaaatcaaaaatatattgacaatgaat gggtaagctttctactagaaatccaaacataaattgcatagcttttaggc ggcaatcacaaatatcttcatttcgcgtcctcgttgggtctaaaaagtga gttggtCGGTCAGTCGTAAAAAATTTCGGGTTTTCTTACCTcaatcatcc atttttggagtgtattcttgaaggaaactaccagccagccagcagccaaa acaatcGTGTGTGTTATGGGTGAtctcaaattatgacctttgaacactgt gacctccgaccaaaatggcgcatgtaatgataaacaaagtcaaaatgctg tgaatgcgctagaaatcactcgcaaaaaatcggcaataataaaatttttg aatgaaggaaagaaaaagtctgacaaatttaccgactcaacgtctcaatt ctactcaattttcaagAGTCGGTCGGGTGGcgcgaaacaaagatatttgt gattgccgccttaccaaaaaatagcactttaggatcagaaacagtcaaaa accagctttttccaattttcatcgagttacaggaattaattccttgtttg ttttgttgatctgaaattttcagtaggggtggccaacatggttcccctgc tcatatcagggggcccgagacgggggtaagagaactaaagtttctaagta aaatcttaattatatcacctaaaaaagtgcatttttgtccatttctttta aatagatagtcccagttccttatccctctttcagtaaagcttcccacaca agttcgattaaaaaaattaatccaactctaagattttttaaaagattgtg agtgttcgattaagttcgattaatggGTTTTGGTTCGATCAGTTtgataa acaaattttgttcgacaagtttgtgctgctccgccagcatatattagctt cttttaaAGCCAAATttggaatgtaaatcgggaaattacttccgataaca gattacacacttttcctgtatccttttagcgccagaggcggtttgttggg gcatagtattccgccactcTGCTGCGCacgaaatcgcaacagaggggcta cggactttattccggatggatagacaaatatccgggtacaataaacgtca agcggttaagtccgggaactgtcaaaatggcaatcgcgtgccaggacaaa gtttttgcaagcgagggaagatatatgagaaccccttttttttttgaacC AATCAAGCCTAATCAaacataataaaataaaattcaacgTAATCAAAGCA ATCGAACGGTAAATCCTGGGTGATACAGGGTGATATTCTATTACAATTTG ATTGCATTCAACAATCGAATGGCAattattcaattgcgttcaattcgcgt tcaattgatttggcgtttgatttgttcgattgacaccatcTGGTTATAAA CTAGGTTCGTCTTGCCTCTTTTCactttccctttacaacaatatgCTGAC AAACAAGCTGACAGAACTTTCTTTGCACTGGTGCTGACCAAATCACCCTC TCAACAGGGGAGTAGGTTGAAGTTTGTGTCTGTCACCTGCggcagatttt tgaaaaaaagccttcaaatgttttTAGCTTAAATGTTTTTTCCAACTTCA AGAGAATTCATTAAACTTGTGTTAGCGGCACGGCACGGCAATTTGAAATC AAGTGACTACCCACTGTATAATGTACGGATCATAATACAATACAATAATA TATAAATGTTATTACACAATTCTCAAGGTGATAAAAACTAAACTTATACA CATGAGACAAAATAAATGACATAAAGGAAAGAATTATACTAAATCTACCT ACAAAAGACCAATGAAATACAAAGTAATAATTGTAAGAACATCAAACAGt tacacaaaagaaaaaatataaaatcaatgCCGAAACGGCATTAACAGTGG TAATTTTCATGTAAGATGGGATAAGTATGGTGGTCAAAAGAGGTAACCAC CGGACGCCCCACCAGACACCACTGCGCAGTGTAGGGCAGTGTCCAGGGTC GTAAGcattcacttccacaataatttatgtaattacaCTCTCGGTCAGTC AGGGTTCATCATAATACGCATGTTTTTAGTCACATGACTGAGGTACCTAC TAAAAAACAATCCGGGGATAAGTGCCAAAGCAACACAGATTATTCTTAAA GTAAAGAAGTATCATTttgcattgacaatcaaatataatatattacatTG TGAATCTCCAAGCAATTTTTGGCTTTTGCTGGCAATCTGCCGGCACTTTT TCCACACCATGTCACCCAGCAACTTGCCAGCTACTGTTATTACATTGTTG GCATTAGAACCGCAATATGCCCGCAAAAACTAAAGCCGGCTAGTTGCCTG CATCCGCCcatttgtaataattatgcattgccaagtTTGGCTCCCCATTG TTCTTACTGTCAAGTAACTCCATAATTActtgaaaagttttttattcttc ttaAATATACTAAATACTGTTAAAGGGGGTAATATAAGggtgaaaaatct aaaatttctctgtcgcccaaccatggtgagCCACATAATTTTTTAGCCAC CTCAATCTATTGCACGCCGGGGGCCATATAATTCCATGTTTCAATCTTAC ATTGAAGACAAATCATActcttgaaagaaaaacattttgcatTATGGATC CataatattttaagattttgcagGGACTTAATTTTGTGGATGGCACCATT GGGAGACAATACTTTCCTATGATAACGTTATGAAGTGTCACAATAAtaaa ctttttgttgaaaatttcattctttgtCTTTTGACGTGATTCCCAAAATC CATAACACGTAAAATGATAATTAATTACTTTCTTAAGATTTGTTGTTGAA GCCATTGTCATCATAAAAGTAAgaaagtccagcaaacaggatTTTTTTGC AAGGTTTGCAAGGGCTAACCTTTTTTAGAATAAGTCTTTTGAGGAAGGAC ATAAActtaacatttttctttttttagacaTGATTTGTCAGATGTGTGTC CTTGGATAGGGAATGAATTTTAGTCATCAAGAGATAAAAGCTGAGGTTGA CAATGAAGTTTGGACATCTAAAAACTATGGTTTTCATTTTAAACAAGAAG CTGCCTTAGTTGATGGCGAATATAGATTTTCTACTTGTGAACTGCAATAT TCTTTAGATAGTAATGATGATagagaaaattccttttttgaaGAAGGATC AGCTTTAAATGATCCTGATCTTGAATGTGAGAATGAAAAGAAATTGTGGA AATTAAAATTGAAGTAGAAGAAGAAGACTTTTATTTATCAAGCAATGGAA AAATACCAGCTTATGTTGATCAACCTTTCCGGGCTAACCATTGTCAATCT ATTTCTGATGAACAGTAGAACTATGATTCAAAAGAGGAAGAAAATTCTGT AGAGAAAAATTATGTTGCAGGAGGCAAAAAGCTatcaaaaagcatcaaaa ctAATAAACAGGGCAAAAGTACTACACAACGATTGCAATGTGATTTATGT AATGTTCtacttcaaatttaaaaaaccacAAACTAAGAGAACATATTAAT AAAggagaaaaatttatcaaatgtGAAAGTTGTGGTAAAAGTTTTTCTGT AGAGAAGAGGGCAGACGATTCAAATGTAGTTGGAAATATTGTCAAATGTC TTTCAGTCAACTTTATGACCTAGAAGCTCATTTGAAAGACGCACATGGAG GTTTTAAGTGTGTTTCTTGTGAAAAATCTTTCATGACAAAATCAGGTCTT ATTACACGTCAGAAGGAGTTTCACAAAGATAGGTCTAAATGTCAACATTG CGGTAAAGTACTAGCTACTgaagaaagccttaaaagacATTCAACACGCC ATCCCTGTCatcaagaaaaaagattttcatgcaTCAAATGTGGAAAAGGC TTTACAACCAATTCCTCTTTAGCCCTCCATGATAATGAAATACATAAAAT GATTGAAACTTTCAAATGTAGTATATATGCGGTAAAGCTTATTTgggtta ttttcgaaaaatctcAGTATAAAAACCACATGAATTCTCACAACAATGTT AAGCCATTAAAATGCGAAGAATGTGGTAAGCGCTTTCAGCAAAAAACGTG ATTTGAAGACACACACTGTGATTCTCGTAAAGGTCTGAAACCATTTAAAT GTGATATTTGTGGAAAGTGTTTTCCAAACGCCAGAAACTTACGAAGACAT AGCAAAGCTTTACATACAGATATGGAGGTTTCCAGAAAAGCTGATTTAGC CAGCGAAAACGACGAGGGCGAGGCGcttttaatttaaaattcttattcat cataacattttgaaagtaattcctttatttaaaagtttttatcaGATCAT CTACTCCTCTACACACAGATACGGAAGGCGCAAAAAAGATTAGTTAGTca acatttttataataaaattttcatcaaaagttttaatCAAATTGTGTGCT CTTTTGAAGAATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00029646TCONS_00029646Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00029646-proteinTCONS_00029646-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000762supercontigsc0000762:146567..152979 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.02 2.1 1.68 1.64 2.94 2.55 2.15 2.62 1.13 0.9 0.38 0.86 0.64 0.84 0.79 1.35 1.01 1.01 1.23 0.48 1.07 1.07 2.04 1.74 0.84 1.24 0.55 0.55 0.51 1.03