TCONS_00029646-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00029646-protein
Unique NameTCONS_00029646-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length151

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00029646-protein ID=TCONS_00029646-protein|Name=TCONS_00029646-protein|organism=Clytia hemisphaerica|type=polypeptide|length=151bp
MSFSQLYDLEAHLKDAHGGFKCVSCEKSFMTKSGLITRQKEFHKDRSKCQ
HCGKVLATEESLKRHSTRHPCHQEKRFSCIKCGKGFTTNSSLALHDNEIH
KMIETFKCSIYAVKLIWVIFEKSQYKNHMNSHNNVKPLKCEECGKRFQQK
T
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016944XLOC_016944Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00029646TCONS_00029646Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 47..69
e-value: 0.15
score: 21.1
coord: 77..100
e-value: 0.52
score: 19.4
coord: 20..43
e-value: 99.0
score: 4.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 79..100
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 77..105
score: 11.219
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 20..48
score: 9.473
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 47..74
score: 9.411
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 2..54
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 122..150
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 48..95
NoneNo IPR availableGENE3D3.30.160.60coord: 87..107
e-value: 4.7E-6
score: 26.3
coord: 58..86
e-value: 2.4E-9
score: 36.9
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 48..69
e-value: 0.0076
score: 16.6
NoneNo IPR availableGENE3D3.30.160.60coord: 139..151
e-value: 2.4E-4
score: 20.6
NoneNo IPR availableGENE3D3.30.160.60coord: 1..32
e-value: 3.4E-5
score: 23.4
coord: 33..57
e-value: 1.4E-7
score: 31.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 108..138
e-value: 4.1E-8
score: 32.9

Blast
[Close]
BLAST of TCONS_00029646-protein vs. Swiss-Prot (Human)
Match: ZN768 (Zinc finger protein 768 OS=Homo sapiens GN=ZNF768 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.604e-18
Identity = 55/153 (35.95%), Postives = 71/153 (46.41%), Query Frame = 0 
Query:    2 SFSQLYDLEAHLKDAHG--GFKCVSCEKSFMTKSGLITRQKEFHKDRS-KCQHCGKVLATEESLKRHSTRHPCHQEKRFSCIKCGKGFTTNSSLALHDNEIHKMIETFKCSIYAVKLIWVIFEKSQYKNHMNSHNNVKPLKCEECGKRFQQKT 151
            +FSQ  DL  H +   G   +KC  C K+F   S L+  Q+     +  KC HCGK       L RH   H    E+ +SC +CGK ++ NSSL  H   +H     F C I          ++S    H  SH   KP KC ECGKRF Q +
Sbjct:  297 AFSQSSDLIKHQRTHTGERPYKCPRCGKAFADSSYLLRHQRTHSGQKPYKCPHCGKAFGDSSYLLRHQRTH--SHERPYSCTECGKCYSQNSSLRSHQR-VHTGQRPFSCGICGKSFS----QRSALIPHARSHAREKPFKCPECGKRFGQSS 442
The following BLAST results are available for this feature:
BLAST of TCONS_00029646-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN7681.604e-1835.95Zinc finger protein 768 OS=Homo sapiens GN=ZNF768 ... [more]
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