XLOC_015915 (gene) - C. hemisphaerica

Overview
NameXLOC_015915
Unique NameXLOC_015915
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000665:13842..16623+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015915 ID=XLOC_015915|Name=XLOC_015915|organism=Clytia hemisphaerica|type=gene|length=2782bp|location=Sequence derived from alignment at sc0000665:13842..16623+ (Clytia hemisphaerica)
AACGACTAAACTTtgttttatctttgttttttaaagactttttgaaaTGC ATTTATGGATTTTGTAGAGCGTTCTGCACGTTGAAAGTCGAGTTCGAAAC AACAATTGAGCTTTCCACGTTTGACGtcacaatcaatgatgaatggAATT TACAGAGAGTTCAACGGAGAAACAAAGGTATGATTATTTTAGCCAATCAA CTGTGGGATTAGATTTTTCATCAACTACAATCGACGCCGAAAAAATTGGC ATAAAAGGGGTATTACCTTAAAACTTTAAACtgtaagtgatttttaagtg ctttaatGTACGGTTAGAAAGTAGACTTTTAACCCTGAGTTTCAACACTA TAGAAGCTTAGAATCTCACACATCTCAGGGTCTAAAAGCTCAAGAATGTT CCAATATGGCTGAAAACATAGcatggaagccacttaaccacTCCACTgga acaaagtggaagtactgaaattacaattctcgcccgagctttaaattcta gaaaacgttaaaatacccaaaaattgccaatatatttcggcgctgattgt agCAAAGAAAATGGTTTGTAGAGTATACGCAAAGATCACCGAACTCGATT TTTGATAGAAGATANtccaaaattgccaatatatttcggcgctgattgta gCAAAGAAAATGGTTTGTAGAGTATACGCAAAGATCACAGAACTCGATTT TTGATAGAAGATAATGTATTCATTTTTAGCTGTGTTATTTTTCGATTGTT GATTGTTTCGGCAATTTCACCATCAACCAAAATGTAGTTTGACCTTTTAC CAAATGGTGAAGTTTAATCGTGTATGAAATCTATTCAATATTATAAATCA CAATTTTCAGGATCTGGTTTTTGTGGCTTGACGAACATTCAATGTGGAAA AGtgaaagcaattggtcaatGGACCAATAAGTAAGACCATATTTATCTTG GAAGACACTTAATTGAACTTTGATTGATATTATTTgcttattggacctac ctagagatcctataaattaacctgtgttcgtccgttcgtctattcgttcg ttcgtctgttaccaaatTTTCTCGgaattgaatcataggaattttgTGAA CCAGGCTTCTTCATAATCTCTCTTTTTTGTTTCGAGCGTAACACTCTTAC TCTTTGGGATTTAGAGAGTTTCGAACCTACACATTAAGCCAATCatctgt gttttaaacattcttttactTGACCCAGTGCTGAAGTTAAATCTTAAACG AAATCTATATAAATCACAATTTTCAGGATTTGGTTTTTGTGGCTTGATGA ACATTCAACGTGGAAAAAGAAACAGTTGGTCAAGGCTCTACACTTAAGAA AACTTCTTGGATGGGTAAGACTTCATTCNCTCAACGTGGAAAAGGAAACA GTTGGTCAAGGCTCTACACTTAAGCAAACTTCTTGAATGGGTAAGACCTT CATATTGGAAGATATTTTATTGAACTTTCATTAACGTTAATTGCTTTTTC TGAACAAAACTAGGCTACCtttgtttcgagcgtaaaactcttCCTCTTTG GGATATAGTGAGTTTCAAACCTATGCATTAAGCCAATCatctgtgtttta aacattcttttatttgaccCAATGCTGAAGTTAAGTCTTAAATGAAATCT ATAtaaatgacaattttcaggATTTGGTTTTTGTGGCTTGATGACATTCA AAGTGGAAAAGGAAACAGTTGGTCAAGGCTCTACACTTAAGAAAACTTCT TGGATGGGTAAGACTTCATTCatcattattttttaataaaactaggctac gtcatattcCCCTTTGTTTCGAACGTAAACTCCTACATACTCTTCAAAAC TAAGGTCTAAAAAACTAGGAGCTGtgtattgtgtagactagaacATAACC AGGCTTAAGAAACAACATCGAACAAACTGGATAAACTTAACACCTCGTAA AATGTTCTCATTCCATGCAAAAAGTAATAGTAGTTGCaaaactttttaat caaacccatATTACTTACTCTTAGATTTGACAGACGTGATGAATGGTATG CAAAGCAAATTTTGGATGACCTGAAGTTAAGAACTTAAAGTAAGAACTTA TTGTTATCTATTTTCAGccgaaaatttgaccaaatctATCATATTGTTGT CAGTCGCACCTTGGAAACAGAAGCTTTCATCTTCTCAgttggaaaaagtt ccaccggggctttgaTGTAGCTGCGTATGTTTCAAATTCGATACATGGTA ATAAAAAATGCCTATCAGATTTTGCATAAGGTTTTTCATTCCTGTTGATT CATATAGTTTGACATATTTTNCTTTTCATTCCTGTTGATTCATAtaattt gacatatttttataagaaactcaaTTTTAGCTTCCGTCCTGCTTTTGCTT AGCTTTCTAGCTCTATGTTTGAAACATTTGGTGCGATCACCCCTGACATT ATACCATATTAATGCTTATTTGGTTAGGAGCTGtcgtttgccatggttag atctaaaaaaaattctattacGAGATAATAAAGGCTCAAGCCTAAGCAGT ctagttgcttataagaaaagaaGTGTGCTCTTTCATGTCTTTCCCCCTTT TTAATAGAAGAGAAAACACAATGTATCGGACAGTTTTGGACACATTTAGC AATCAAACTCGTCTACCATTTTGTCTGTAATGataccaaaaataatttta gtgtCTTTATTCAGCTTTACTAAAACGGTATAATTGTTGTCTTATACTAG GTTTCCATCGATTATGCTGACTGCATGGTTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028125TCONS_00028125Clytia hemisphaericatranscript
TCONS_00028126TCONS_00028126Clytia hemisphaericatranscript
TCONS_00028127TCONS_00028127Clytia hemisphaericatranscript
TCONS_00028128TCONS_00028128Clytia hemisphaericatranscript
TCONS_00028129TCONS_00028129Clytia hemisphaericatranscript
TCONS_00028130TCONS_00028130Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00028125-proteinTCONS_00028125-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000665supercontigsc0000665:13842..16623 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.04 9.55 3.97 2.69 5.66 5.65 8.68 10.07 5.9 4.05 6.91 5.4 3.12 2.09 1.08 0.87 0.64 0.57 0 0.2 0.31 0.25 7.52 6.55 9.06 9.84 0 1.26 3.65 4.85