XLOC_014089 (gene) - C. hemisphaerica

Overview
NameXLOC_014089
Unique NameXLOC_014089
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000520:190678..201818+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014089 ID=XLOC_014089|Name=XLOC_014089|organism=Clytia hemisphaerica|type=gene|length=11141bp|location=Sequence derived from alignment at sc0000520:190678..201818+ (Clytia hemisphaerica)
GAACTTTGATAAGTGGAGACTTCATTGACTTGAGTGAAGAAAGAAGTCAA
ACTCCAATAATGACGTCTCAGGTTAGTCATGAATCCTAAAGCAATGCCAT
TTCCCTTGAAAAGAGGATAATGGGAGAGTCTGACATCATATTGTGTTTAC
CCCGCTTATCTTTCTGACCATATGGAGGGACTTGAAACAAGCAAGACAGT
TCTACGTATTGAGAGCTTTGACTTGGAGTATAGCTAGCTTCAGCTTCAGC
TTCAACTATTACGTAGAggagaagttgattttttaaattacgGTAAATGG
TATTCTACCTTACAAATATCAGAcatgctacacgtttttttataagaaca
aactgtataagaacataaggcttcgatggccacattgttaagaacaagtt
aagatcattttaaggcttcgtggactcgatttcttaagaaaatggacaaa
aataaattagaacattgttaggcgaaaataaataagaacattgttaagaa
cattttcaggcttaaaactaaaaaagttaaaaacatccgaaggctttaat
aattttaaaagttcttataCACAAAAAATAAACTTGCACTGCTACAATGG
CCTAAGTTTATTGTCACTCCAGTTACTAAACGGTATACTTGAACCACAAC
AACACCACAACACCACAACACCTCAAGATACATTTTCCACAAACAAAATT
GTACCACACAACCTTTACCTTCGTCCAgaataaaaaaattgcaaacATAG
CACAATAAAGTAACAAGAATTAACAAATTTTGATACCGTTATCTCGCGTt
accaaaacaaacaacaaaatgttTTATCACATGTTTGCTCAGTAGTGGAA
TCTCCTTGCATGATctcatctttcaaaaaataatctTACCAAGCTTTAAG
TTACTGaactacacactttttttataagaatggtgtaaaaatttcatcac
ggatattcttaacttctttgatgttcttaaattttgagatcAATTAAGTC
AAAAGGGTATTGAAGTGGATGTTACCAAGAATTTTTTCTCGTAATATATT
TCGAGATATACTTCTCATCTTCAGATTATTACCTGAATTGATTAGTACAG
TACCAATAGTACCTTTGAGCatttgaaatcttgttaaaattaTGTACAAT
ACTTTTCCACTTTTGTAAAAACGTGAGACTAAGATGATTCATGTATCACC
TTCATTTTAAACTTTCCTTGCTTTCAGGCTGGgtatgttcttaagatgtt
ctattTTTTAGTAAGATTTCAGCCTAAATGCTCTTATAAActtggttcta
ataaaaaatgtatAGTGCTTTTCTATCCAGAAATTGCACTCGGATGCGAT
TAAAAGGAAAAGAAATGCACagttaacaagcaacatgctgaatggaccta
cctgatgatgaaagttagttagcaatgcgaaaagaaaaatgaaaaaaatc
agacagaaaatatagcatttagcgaaaatacacaacacaataaattcatc
attgattgttgatgggggggagAGAGAAGGGTTGTAGGGAAAAAACAAAT
AGGAAGTTCTGGTCGCAAAAATCAGTTttattgacaattgaatcatgctt
gatggtgagcattgttatcaataatgtttttgtgtgaaaaacatagaaat
acaaggaaaaaatccaataaaaatctgcaaaaacggcgatttccggcaac
tggaaaaaattttttctcaaaaatcgaactcggccattttttgagcattg
cgaatacgcatctttctgcaaaaaatcagaaaaaactaatgatgaaatct
cgagaaaatgccgaaaaaccagttttacggcatatttccgccattttcgg
ccggaaaatttttttttttcgaaaatcgggctccgtcacaatttaggtat
tgacattttgcatcagtgtgcaaaatttcatgaaaaaatataaagtacag
ctcaagaaattcaagaaataccgtttttccggcgaaaatcggctgttccg
gcgatttttagaaagttccggcttcaaaaatcaattttattgaaaattga
aacatgctttgtggtgggcattgctattaataatcttttggaatgaaaaa
acaaccaattatatggaaaagtccaatgaaaatctagaaaaacggcgatt
tccggcaaatttcaggcattttcccccggaaaaaattttttcttaaaaat
cggactcggccatgttttgggcattgttaatacgcatctttgagcaaaaa
atcagaaaaaactaatgatgaaatctcgagaaaatgccgaaaaaccagtt
ttacggcatatttccgccattttcggccggaaaattttttttttcgaaaa
tcgggctccgtcacattttgggcatttccattttgcatcattgtgcaaaa
aattagaaaaaactaatgagccaatctcgagaaaagctggcaacagacga
acgaacggacgaacgaacggacgaacgaacgaacgaacggacaagggtta
atttaaaggactgactaccttaggtaggtccaaaaagactTTCTCAGGGG
ACTAAAAACCTTTTCTAATTATACTCTGTCTTTTTTACAGATACCAATAA
AACTTAATTGAGAATCgagtgttcttatttttggcactttttaaGCCTCA
CATTGTtgttatcctgttcttattttatgACGTCAGTTTTATGTTCAAAT
TACCGACGTAAAAAACGTATCCAGGGTTACTACGTCGTTTGAATGTTGGT
CGAAGATCGACTTAATTGCGACATGAATTCGATGTAAATCGAGCGTTTTT
CATGTTCGACCTTAAATATCCTCTGTCGGCCTAGTAGGGAAGCGGCATCA
GAGTTAGGTCGAATTCATGTCGCAATTAATTCGGTCTGCAACCAACATTC
AAACGACATAGTTACAACGTCTCTTTTTCGACGATTTATCCCTctcaaca
agtgatacttttatggacctacctggttatgcatttaacacatataattg
atatctacataagcgtgtccattaaacaatcattcagaacacaaatagtg
acgatctattaaaattagtcgtttgtttcttataaaaaaaacgtttagaa
tccaaaatttcatgctcttgaaatgttcttttataTTCattattcaagac
tttgtgagcaaaaataCATCTCTCATAAaagattgagtaatttggctaag
aacattgatgtatgcttattaatagtgattcttatagataaacatgcgtt
ttttcaaaaaaatttgcttgagccatcttttacctatgatggtaccctat
tttcatgcaaaaaatcagaaaaagttaatgatccaatttttcacaaagtc
caaaaaacccgttttttagccgtttgttggcccaaatttacccaaaagaT
TTTTTTTTGAAAGTCGGGCTCCGTCACATTCgagggtttatagttatgca
tctttgtgcaaaaaatcataaagaatcaaagagccaatctcgagaaaagc
taatacctaagtaattgataatttgcttataaataaatattgaatttggc
cagtttttctataaaaacacgccaagaaaccaaaatttcatgtctaaaca
cacacattcttcaaaagtaagccctcatgagcaaaaaaaacatctatctc
ataaaaaaattgagtaatttaactaagaacattgatgtatgctcctgaat
agtgattcttatatataaacatgcgttttttgagccaacaaaattttttt
gaaaaaatttgcttgagccatcttttacctaagatggtaccctactttca
tgcaaaaaatcaggaaaagttaatgatccaatttttcacaaagtccaaaa
aacccgttttttagccgttttgtGGCCCcaatttgccccaaaattttttt
ttcgaaaatcgggctccgtcacattcgagggcttatagttacacatcttt
gtgcaaaaaatcagaaaaaactgatgaaccaatcacgaggaaagctaata
acgaacaaacgaacgaacggacggacggacaaaggttaatttataggacc
tccaccccaccggggtaggtcaaAAAAAGTGGGATGGAATAGAACTAAAA
GGAGATTTGATAGCGGAAGAATTTCATAGCAATTACATGCGTGGTTCCTG
CAATTAAAACGCTCTACAAAATGAGGTTTCTGAAATTAACTCTGTTAATT
ATAAGTACCACCTTAAATTTACTCAAATCAtatccgtataaaaaaccctg
gtctagaagcttattgttttaactttttgttatctttttcctttgttaat
atcaaaagataaaaatcgatttgctcagtttttgatgacgttaccaagta
ctcctcttgggattggtttaagatttaatcacataatcaaaaagtgagca
aaacaaaccaatttcataacgcaagttcaagtaagaaaaaatggaaagaa
acaaaaggcttccagaccggggttttttatacggactatgctCAAATTCA
CTCCCCATTTTCATTGGGTTGTTATTAATTATTTTAAGAAGACCTGTAAA
TCTGATGGCCGTTGTTGgctgataaaaaaaaaattttgatctaAATCAGT
AAGGTTACCTAAGCTAATactgttaatatttttaaaaagcgCTGTGGTGA
CCATTTCAAACTATTTCGGAACCGATTAATACACCGCTAAGCTTTTTTTG
TattgagaaaaaattatttttaatttcccTCACCTAGCTTGTAATGTTTT
TGATAAAAGATACCATTTTACGATAATTGAATTTTAATCTTAACCAGCGA
CATCAGTTATAACAACATTACCAATTATTATCGATCTTTTTATAAATTGA
TATTCACTTAGAGTATACATGGCTAGTGTTAGTAATTTTGAAAAGACTTT
ACTTAGATTCTATATCACTGTAGAAGAGATTTAAAACTAGATAGGATTGT
TGCGATATAATTTCGTCATTTTATgtggatacacgtttttttttattata
agaacgtcaaaaattttcgaagccttcggatgttcttagttttttggatt
tNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtttttaagtctccaaag
ccttagaatgttcttaaatttttgggcctcgaagccttatgttcttatat
agtttgttcttataaaaaaaaacgtgtacactaTACTGAAGACATGTAAG
AATAACTTTTTCCTTAGATGAGTAGAGAGCTGCTGAAATAGAGACAGAGT
TGGCCTCAtcttaaacttttcaaaaattttaactttcaaaaaattttaat
ttttcatttgtcaaaagttagagCTCTAACTCACGTTACTTGATCACGAA
CTCAAAGAAACCTTCTTTCGAAAATGTTACAGTCAATATTGGTCCTTTCA
GCTGTAATTTCGAATAAAACATCTCTGTAATTTCGACtttttctctaatt
tgaagaaaattatgtTCCTTGAATTTACcggaatttcggaaaattgGTCT
GTCAAAATTTGTTCAGGAAAACGAAAATACTTATAAAGATTATCTTAACA
AAGTACTATATAAAGAGGAAGGTGTCTTGCAGGTTATGGCTTGCAGATTT
TCCCATAAAAGAGGAAGGTGTCTTGCAGATTATGGCTTGCAGATTTTTCC
AAAGGGTTTCTACTCAGTCATAACAACGCTTATAAAACAGTTTATTTATA
AAATCAGCTTAATCAGATTAATCATCATTAGCAGTCATTTATATAGATCC
ATAAATAAGATTTGGTTTCAATAGACCTATGGCAGATATTAAGATGGATA
GGACACGTAAGGGGTTACCTTTATAACAGAGAAGATTTCGATGAGAAGTA
TCAAACACAAGACCTTTGACTTACAGTAACTTTAGATATTTAAAATAGGA
TTGCAGATTGAGAAGTCAGGTGagttagtatatgtaatcacatgataacg
agtgcaattcgaatataattgcacgagtgatttttttgttattaattttc
cgagtccgaaaggacgagaaaaattaaaaaaaaaaaaaataacgagtgca
attcgaagataattgcacgagtgattttttagttattaattttccgagtg
cgaaaggacgaggaaaattagaaacaaaaaaaatcacgagtgcaattttc
gaattgtacgagttattatgtgattacgagctaatcgcacaatggctatc
actacttttcccagttagttaagtaaattacagaaattacactgatagtt
ttatatttttctcttctctttatgtctttcttttattgttgtttattgat
tttctttctcacaaaataaatttcgaatgcaattaaaacgttcgatgcaa
aaaaaatgtaagaaaaaatattaaaatcaattttgtaaacattggcgcgg
cattgtagagtgtgattaacgattaattgctctctacaggatgcaattaa
cgattaattgctctctgtGAGGGCGTgcgaaataagaaaaaataacccat
cgtgcgattatatATTTAATAACGCCTTGAGAATGAGACGGacttaaggt
ggtagtctaccgccagatttcaaaagtcaacaaatcacattttttgcaat
aactcaagaacttctttacatttcgtaatgaaattttcaggaaatgtaNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTTTG
GCGTATCACATTGCTATGTTTCGGCCGAGATTGAAGAAATAAGTCCTTAG
CAACGGGATTTTTTCTGTTGCTAGGGCGATTTTTCAAGCACGCAACagga
taaaaatgctcactgcggcctgaatgataaagatatagctctgaaatttt
caagagatgttcagaaagacctaaggatcttaaaacacccaaaaaccaga
attcgacaattttttcgatgattttttatttttgggtagactaccacctt
aaggGGCGAAAGCACTTGTCAGATTTCTGATTGAAGTTCTGACAGTAAAA
GCTAGACTCCGGGatcgaaaaaataatatagAATATGTGTCAACGAAATT
ATATCGGAGGGAATTCAGCACTTTAGAGTTTTATTGGGCACGAAATTTAA
CTTGAACGAGAGAAGTCATATGGGTAGTCATTACATGACAAAATAAGACT
CAACCTTAGTTAGCTTCTATTTcgaagtaaaaaacgtaaaacatttttat
aaaggTTCCTCAGTAGACTTTCAAATATTGTGACGTATTCCCTAACATCA
ATGGCTGACTAGAGAGTGACAAAGTACTCTACTAAATCTTTTCCATCCCG
TATTTGGGAGTTAAAGAGTTAAGTCCTCTGGATCTTCATCTTGTTTTAGT
GCTGCCGTCGATTATTGTTGGAAATACGGGCGTAAATTTACTTTATgaca
aagatttttgaaaatgtaaaggCCAGCCGTGTGAATATTCTGTGAGACAA
GTCGAAAGAAGAATATTATTTATGAAGTATGAAACACCTTAAAGTTCTAA
ATGATATTCACAAAgtttttcgaacaaaaaaaacagatatAACTTGTTTA
CTAATTGATacgaaaaattcgaaaaattctcGTATAGGAAAGGAAGTTTT
AATATTTCTTGGTTAACAGTGTGATACGACTAAATAATGATGTAACATGG
CGTTTTAAGAAGGACAGAGCTGTTTCATTTTCATAATATAAGAGCtgcca
atttttaatttttacttgaaataagAGAGTTGTTAAATATTATATTAATC
CAGATTTACATGAATTAAAAATCCATTAACTTTCAAACAGCGATATCAGC
GGTTTCTGttgcttttttctaaaaagtgaTTTACCGTACAACGGAAAGTT
ATATCCTCCCTTTAATTAGAAAACGCATGGAATCTATTTTGTAACAGAGC
TTAATCatccaaaaaataaattttcattgaaCTGTCTGATGAAACAATTT
CATGTCCTCCGGGCAGTAGGATTTAGAGAAGTCTTTCAAAAAGGTAGGCg
acataaataaaaaacaacctaTCGACATTATTAATGCAGACAATCTAGTT
CGTtgaaaaaacctaaaaatatgaTTCGCGAAGAGTTATTCTACGAAAAC
CAAAAAGTCGAGATATGTGTAGTTATGGTTCTTTTGTTTCGAATGTCTCG
ATGTAATAATAAACCATGATCTTGATCTCATAATACATTCAGTAAACTAC
TGAATGTTTCATTATATTTATCTTTTATCATTTCAGACAATGGACGGAGT
GACAGTGGTAGTCATTCTATCGATCACGGCAGTTCTCGTCTTCATCCTCA
ACGTTTTCTGTGTTTCCATCATCGTCCGCAATCAACAACTACGTTCAAAA
CCCTCCTCAATCCTCACCGCTAACCTGCTTTCGATGCATATCCTTCAAGC
GGTCGCTACAATGCCATTCTACGCGCTCAAACGATTACCTGAAACTAACT
CGAATTTTGTTTGCAGTGGATTTCGTTTTTTCTACATTCTCACCTTTTAC
ATAGCATGTTTCTGCGTTCTTCTCATCTCTCTAGACCGCTTCTTAGCGTT
CCGTTTGAAGATGAAATATCGTACAACGGTTACAAGTAAACGTATCACGT
ACGCCCTTGCGTTAGTATGGGTCTACATCATTACTATGTGTTGTATACCG
TTCGCCTTCCGTACGGAGAAGTGTTCATACAACCCTCCCCCACAGTGGGT
CGCCTTCATGCTTCTGGTGAACTGTTTCCTACCCTGTCTCGTTATAGTCG
GAATCTACACCTACATCATGGTGTGTTTAAGACGATTCGAGaaactgaaa
aacatgaaaacatcACAATCTGGAGGAATggtttcaatctcaaaatcgaA
CAAACGAATCACTCGAAACACAATGATTCTCGTAGCAACGTACGGTATCG
CTTGGTTACCGTCAATCATTTTCTACCTCATACAATCACTATTTCCAGAA
GTCTTCAGTGATTCTTATTACGACTCAGCAGAGGACCAATACATAAGTTT
CTTCCTCAAATATATCAAATTTGTTGAAGGAATCACTTCACCCGTTCTCT
ACTGTTATTTGAACACTTTCTTCCGTAAAACGGTAATGGACCTGTTCTGC
ATGGACACTTCCGCTATTCGACCTGAACAATCCGAATTTCAAACACAAGC
GGTCATCGTGATTAACGGAAACACTTCTTCCGAATGAAATGTGGACAGTT
CAAATACCGTGTTATACACAGTGGGCAACCGTGGAAACAATTCCTTAGCT
GCCTCAGAGCTTTTGAATTAATCGGAGCAAATCACTTTAAATTTATGTTA
TTAGTTATTGCAGGGGCTCTTTCACAACGCTGTCAAAAGAGCATAAAGTT
TATGTGAAATGGTGTAATCCTTGGTAAAAGGAGCTATGAACATCAATAAT
ATATTACTATGAAGATCAATAATATGGACGTGCGTAGTACCATGCAATAa
cagcgagattatgtatctggaattctctacagCTACGGCTAAAgcggcga
gggaaatggcgagtaaggcaagtaatggcgggtgaaagcaagttcgatat
ttgacgtacggcattattcgactttgcttatacggtgtttttCCCGttca
gagcaaagtagacaacgacatgtcgcctttggtgacgacccgcatgggca
gccacgcaaccgtagccgtagaatatctccgatacataatctcgctaaca
atagctgattggttgtaagtgacgtaaaatcagtcaatacgtcactttta
accaacCAGCTGTGTTGGGTCCGtgaaagacattgcaatggttcatatca
tgaattcaaAAGAACATGCATGAGCCAAAACTTCCCCGATTTCCTACTAT
GATTTTATGGAGGGAATaaaaattcgaaaagaaaaatattatgttTTAAT
AATTTAATTGTATAGTCTCATTTATCCTGATTTTATCATCAATATTACAT
GATGATTATCTTAAAATTGTAATATAAAAGCTGTCATTGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00025059TCONS_00025059Clytia hemisphaericatranscript
TCONS_00025060TCONS_00025060Clytia hemisphaericatranscript
TCONS_00025061TCONS_00025061Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00025059-proteinTCONS_00025059-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000520supercontigsc0000520:190678..201818 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16	0.05	0.09	0.26	0.13	0.35	0.19	0.28	0.48	0.89	0.49	0.34	2.97	2.16	0.04	0.1	2.77	1.34	4	2.93	4.65	5.65	0.42	1.12	0.86	0.73	0.13	0.07	0.08	0.03