XLOC_012425 (gene) - C. hemisphaerica

Overview
NameXLOC_012425
Unique NameXLOC_012425
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000406:133195..138917+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012425 ID=XLOC_012425|Name=XLOC_012425|organism=Clytia hemisphaerica|type=gene|length=5723bp|location=Sequence derived from alignment at sc0000406:133195..138917+ (Clytia hemisphaerica)
AGCAATTTTCTTGTGCAGAAATTTATGTAGCATGGCAAGGCTTGAGATTT TATGCAGGTTGTGCAATTAAAATCCTTTCAATCATTGTTGAAGGACCATT CGTTGTTGATGAAACGAGCTGCTTTACGCTGTACCATTTCCAGATCAGCG TATAGACCTGCATCTGAGGGTCCTGTAGGGTTTCAAACACTGGAGGCATA CATGACAATTGGTAAAATAAAATACAAGACTTTCTTTGAGGTCAAGACCG CTCTTAcacaaagatttgaaaagctCCTAAGGGGCCTACAGTTgaactct tggatgggaaagcAACTTATATCTCATCTGAAACCTGTGACCTGTATATG AGTCAGGTAGAAACTAAATTTATCAGAAATTCCATACAAATGCTGTGCTG CAAATAACGACTGTTGATCGGTAATTACCggacactttttggtcattccC TAAAACCCCTGTCAGGGGCCTTAGAGTGCCCCCAGAACCCCACTCCATTT TTTCTTGCTATACTCGAAAAATCCGGCCAAGTCACAATTCCTTATTTGCA GCAAAATTGAATGTTTCGATTGGGTAAGAAAGAATTGATTTGAACGTTGT AGCctttgataataaaaaacaacagtagaaataaagcaaacatACTTTGA AGAAAGATACCAATAGACCTTATCATAAATTAcattacgaacatcacttg cctcgtttcgaaattattgccatggtgattaacgcCTAGCGGATTTTAtt tactttctattcataaaaatatcatttaatgtctcaagggacataatcac catggtaattgtttgaatacgaggcaagtgatggtTGGGATGTAAtatat gaaaaggtctattccgaCACTTAATATGGCCCGTGATAATAATGGAAAAA TAACATATTGTTTGggttattttaaaattaataacCCTTCCTTCGCTCAC TACATTGAGACCAAttcgaaatattttcaatgaacATTCGGGTGATCTAC CTTCATACCACCATGTTATTTCTAGTACTtccctttcaataaaaaaaatc ctgAACCCAGTACTAAAATTACGTCAGTTACCTAAAGGTATgccaaaaca tttttcaaaattttctgacaatatcatcatttttttttctaggtAAGTGT GCAGTAGTGAAGACTTCTACAAGACAAACCTACTTTCTACCGGTTATTGG TCTAGTTGATGCGGAAAACCTGAAACCTGGCGATCTGGTTGGTGTTAATA AAGATTCATATTTGATCTTGGAAACATTACCCTCAGAATATGATGCTCGT GTCAAAGGTAGGCAAACCACTCATTCTCTTATAGTCAATTCTTATTATTT TCCAGTTTTGGACGTGTTAAAAGAATCTTTATCGCCCGTTATGAGGCATT GACTCGTGTAAACTTGAGCTGTGTACCCAACACCATGAGAACTCTTTAGA AAAGTAAAATCTAACCTTAAAATCCTATTTgtatggaaaatttgaaaagt atcaCCCCATATTTTAAGttaaaatgtattttaaaaACTCCATAAAATTT AGGATATTCCCTATACCTCGAGACGtcaaaaactatcaaaattcttttgt gGGTCAACACATTGCATGCATTccccctgagcttagggggctaaaccatt tttgcttgattgagCGCTGTATTATTTTCTGGGGGCTAGCTGGCTAGGGA GTTGAGTGTCGAGTAATGGAACTGGAGACAGAGCTGATATAACAGTAATG CAAGCTAAATTTCTTcgatattttgctttgtgagGAAGGGGgttacattt ttaaaatttcgccGGGGGCTATGttccttagccccccccccccccNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGAAA AATGCTGGGAGTTGGACCCCTCTGCATTCTATGCACCAGTGGTTTAGTAA TAGAAATCCTAAAAGAATCAGCTCATTTAAAAATCACTGCATCATATCAT GATTACTAGGGCATTACAAATGGCCTCTGGCCATTAATTTATTAGAGAAT CATTATTAGTCTCAAATTCCTATTCTTTTCAACACCACAGTGAAATGACG TTTATATTAGGTGAACTGATTCTATGAGTTTCCATCCATTCATCTCTTTA TCTTAATATGCTCCTTCTCTTCTTTCTATCCAACACACTTTCCTTACAAA TGACCCCCTTAGTCATTGAaccttttaaaaatttatatatGGTAAATCAT TGGTTGTTCAGAGAacactttttttgtaaataaactcTTTACCAGCGTcc gaattttttctttttcagctaTGGAGGTTGATGAGAGGCCGACTGAACAA TACAGTGACATCGGTGGGCTAGATACACAAATTCAAGAACTGATCGAAGC TATCGTCCTCCCAATGACGCATCAAGAACGATTCGAACGTCTAGGTATTT ATTCTGTTTAAAATGTTCTCATGGTAATCATACTattcttttattgtttg aaaaaaattgtataatttGAACGAACACCCTGTTCAATATGAACACCCTG TTCAATACGAACACCCTGTTCAATATGGACACATCTTCTCAAAGTCTCct cagaaaattttgagatcGTACCTTATCCGGTATATTGTTGTAGAGATTTA TTATTGTCTGGATAGCAACTTAAAAACCAAAACTTGTGTCCGCATCTGGT TCAAATTGACAAGGGAAATTTTAGTCAGGGGAAATTATGTACACTTAACA TTATGTTCAATGAAAATGTATTGTTTAATTTCTGCATCAAATATTTATCT TAGAAAAAAATCTGTCTATGTTCTGTTCAATTCAGGTGTTGCACCACCCA AAGGTGTTCTTCTGTTTGGCCCGCCTGGTACCGGAAAAACTCTACTAGCA AGGGCGTGTGCCGCCCAAACAAAAGCTACGTTCTTGAAATTGGCTGGTCC ACAACTTGTACAAATGTTTATCGGAGATGGTGCGAAATTGGTGAGAGATG CATTCGCACTTGCCAAAGAGAAGCTTCCAGCTATCATCTTTATTGACGAA TTGGATGCTATCGGTACAAAACGTTTCGACAGCGAGAAAGCTGGCGACCG TGAAGTTCAACGTACTATGTTGGAGCTGTTGAATCAATTAGATGGGTTCA GCTCTACATCACAAATTAAAGTAAGAtgatttttgcgtttttttttttat ttataagacaGAAAGGGAAAAGTGTCAATCACCCAAGTTTGGGTAGTTTT GGGTGATAAAATGGTAAAATACGCTGCACCTTTTCGCATTCATTAGTGTT TTAGATATAAGCACTGCGGTATATATCCCCCAAACGTAAGGGACCCCCAA TAGTAGGTTTTGTTTGATTCAAATGACAATTGAAACCTGTAGATGAGTCG AAATGGGGCGATTTTTGATTACTTTGGTTGGTTAGTATTTCTTCTTtaag aaaaacatgtttttggTTGTCTGAAACATTTTGGAAGTAGCCTAATCTTC TATATGAAAAATTGTTCATCTAAATCTGCCAAAAATTGCATAGAACTCTC TTTAACTCCTTAGACGTCGAAATTAAGTTATGAAGAAGGAGTATAGGAAG CTTTCTATAATTCCTAAGAACATATCCCAAAATCCAGGTGAGAATTTGAA TGAGCATTCTCGGGCCCATAAATTGacattaaaaaactaaaaattctcAA GATGGGTAGTAGATAAAAGCTGTGGAATTCTTTTGCTGCCGACATGACAT AGTTTGCAACGGAAAATTACATTTATatacaaattattttttctgaatca gcatttatggcaaaaattttgaaaaatatttcaggttATCGCAGCAACCA ATCGTGTGGACATCTTGGATCCAGCTTTACTTCGATCCGGACGTTTAGAT AGAAAGATCGAATTCCCCAATCCTACGGAGGAAGCACGTGCTCGTATTTT GCAAATCCATTCCAGAAAAATGAATTTCAGCTCTAACGTATGTACTTTTG AACTCTGATACACCTTTATCGACGCGGTCCGCTTTTCAGGggactggtaa tgaatttacaaggaaatTTTTTCTCGTTAAAACCTTCTTAATGAGAGAAT TTCCCTGAGATTCTGGAGTTGCAGGACGTGGATTGCTTAGCATTCGAAAA GTTCAATCTAAATGACGGGAGTATCTGGTTTCTTTAAGCGGGTTCTTACA TGGTTCTTACGTCagaatttcattgttttgataTCTTTCTGTTTAAGGGC TTtgaccatagtcgaaaaattgattttagtatttgaacataaaagttatg tttaggttctttaacacttttaacaaagaattgcctttacaaattgcttt taaatcaaatcccttaagagtaattaagaatttaattgcaaaaatgacgc tgtgaactttaaaaagacgttaataatatgttgcattgccttcttttata aaaaagtgctaaaagttttaatgggtaattaacctttttgttttgaagtt ttatTAAACTGTCCgcgaagaattgaactgtttcaaatttttcggaaaat ttttctaaattaatgcatcagaagttatggctgtttttctatgaaaaaat atacaccatctaccgcaaaaaaaattcaaaaagttttttcttcgccgaaa atgcTCTTCatagttgaaatactcttcttcgcaaaagtcttcattttctt cttcgtctaattttttcattgcgattcttaaattttcagactcaaggata aaTTGGCCtaaaagaaaatgtataacatgccacagttttgtatGCTACAT taagtagaaatttatattttgtacgtggcaaatattaaaaattcactatg gtcagagcccttaatttaaCATGAGTATCTAGACTTGACAAACGGTAGAG AATACGTGAATTGATATCCTTTAACTTAATCTCTTAATCTCTTCAGGTCA ATTTCGAAGAGTTGGCGCGTTGTACGGAAGATTTTAACGGAGCACAACTG AAAGCTGTATGTGTGGAAGCCGGTATGATTGCGTTGAGAAGGGAAGCTAC AGAACTTCAACATGAAGATTATATGGACGGTATCATGGAGGTacaatcca aaaagaaaaacaatcttCAATATTACGCTTAAAACGTTTTTCTCCATTCA TTATAATAAAGATTGTTCCATTTTTGCTAACGGTGGCATTTTGAATTAGG CGTAAATTCgtaaattcaaaaatataagTTTCAATAGTAGTTCTGAATTT TCACGATTCTGGCTTAGCTTACCGGAGGTTTGAATAAATTTTCGAATAAA GAAATTTGACAAGTTTTTGGACGGATTCGGTGCGACTTTTACCAACAGAA CATATAAGAGAAGAACATTTAAGGGCATGTTTCCCTAGATCATTCGGTAC TTGAAAGTAGAAAATCTAGTTTCATTGAATTAGTATTTTTTTTggttaac tcgtgttttttatcAGTAGCTTAACATTATTTACAGAAACAATTTCGATG TCAAATATGCGGCATCagtttttgaattgaaaagaaaattgaaaacatac AACTCTATTTGttatcttttaaattttgtttcagCTTCATCCGAATCGCA GGACCTCTACAAAATTCGCTGGTACAATAATAGTTGAAATATATAGATAT TTATGTACACTCTAAAATTCGCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022154TCONS_00022154Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022154-proteinTCONS_00022154-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000406supercontigsc0000406:133195..138917 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
89.75 88.2 76.04 71.44 102.29 77.45 97.48 108.99 105.4 101.8 96.35 84.98 84.16 94.67 71.62 82.79 85.53 84.85 38.39 42.52 67.62 66.88 63.58 59.71 126.15 126.6 72.96 73.97 58.52 52.43