TCONS_00022154-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022154-protein
Unique NameTCONS_00022154-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length265

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022154-protein ID=TCONS_00022154-protein|Name=TCONS_00022154-protein|organism=Clytia hemisphaerica|type=polypeptide|length=265bp
MEVDERPTEQYSDIGGLDTQIQELIEAIVLPMTHQERFERLGVAPPKGVL
LFGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFAL
AKEKLPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTS
QIKVIAATNRVDILDPALLRSGRLDRKIEFPNPTEEARARILQIHSRKMN
FSSNVNFEELARCTEDFNGAQLKAVCVEAGMIALRREATELQHEDYMDGI
MEVQSKKKNNLQYYA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012425XLOC_012425Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022154TCONS_00022154Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR00593726S_Psome_P45
IPR003959ATPase_AAA_core
IPR003960ATPase_AAA_CS
IPR027417P-loop_NTPase
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030163 protein catabolic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005524 ATP binding
molecular_function GO:0016787 hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 45..184
e-value: 2.1E-23
score: 93.8
NoneNo IPR availableGENE3D3.40.50.300coord: 1..189
e-value: 8.8E-53
score: 178.2
NoneNo IPR availableGENE3D1.10.8.60coord: 190..258
e-value: 5.2E-20
score: 70.8
NoneNo IPR availableCDDcd00009AAAcoord: 15..181
e-value: 4.35778E-23
score: 91.4387
IPR00593726S proteasome subunit P45TIGRFAMTIGR01242TIGR01242coord: 1..253
e-value: 1.3E-111
score: 371.2
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 49..181
e-value: 6.8E-41
score: 139.7
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 152..170
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 10..255

Blast
[Close]
BLAST of TCONS_00022154-protein vs. Swiss-Prot (Human)
Match: PRS6A (26S proteasome regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1 SV=3)

HSP 1 Score: 490.73 bits (1262), Expect = 1.501e-175
Identity = 233/265 (87.92%), Postives = 249/265 (93.96%), Query Frame = 0 
Query:    1 MEVDERPTEQYSDIGGLDTQIQELIEAIVLPMTHQERFERLGVAPPKGVLLFGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKLPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTSQIKVIAATNRVDILDPALLRSGRLDRKIEFPNPTEEARARILQIHSRKMNFSSNVNFEELARCTEDFNGAQLKAVCVEAGMIALRREATELQHEDYMDGIMEVQSKKKNNLQYYA 265
            MEVDERPTEQYSDIGGLD QIQEL+EAIVLPM H+E+FE LG+ PPKGVL++GPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK P+IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGF   +Q+KVIAATNRVDILDPALLRSGRLDRKIEFP P EEARARI+QIHSRKMN S +VN+EELARCT+DFNGAQ KAVCVEAGMIALRR ATEL HEDYM+GI+EVQ+KKK NLQYYA
Sbjct:  175 MEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA 439
The following BLAST results are available for this feature:
BLAST of TCONS_00022154-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRS6A1.501e-17587.9226S proteasome regulatory subunit 6A OS=Homo sapie... [more]
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