XLOC_011765 (gene) - C. hemisphaerica

Overview
NameXLOC_011765
Unique NameXLOC_011765
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000376:36725..46512+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011765 ID=XLOC_011765|Name=XLOC_011765|organism=Clytia hemisphaerica|type=gene|length=9788bp|location=Sequence derived from alignment at sc0000376:36725..46512+ (Clytia hemisphaerica)
aaaaaataaggaataaaattttcaagtgtTCTGATTGGTTAGATGTAAAT TATCACATAATATTGAAGGAAAAttataagtgaaaaaaaaaatcgttttt caatatattgagagggataaacttttttattttcttcgataatttgtttt ttgttttattttttacgtaagttttgaataaaagaaacacTATTATGTGA CGAGGTCgtaaaaatatcaagaacattgacaattttttttggtttgaacg ttttacttttattttcactttctgGAGGGAATTATGAGGCACCTTTGGAT GAGCCTGCTTTTGGTAAGTATCTTAATAGCGTAGGTTATTAGGAGAGTAG aaatgagacagggatgttttaTTCGCAGAGATAGTTCTTTGAATCGTTGG AAAGGAAATCACGAGTCTAAATACTTGTGCATTTCTGAAAGATTGGATAT GTAATACAATGTTACAATAAGTGGACTGGTATGACAGACAGCTTCTAAGA CTTTGCTAAGCCTAATtttgtaatgttttttcttgtctGATAGATTTTTA ACACCTTATTTCTTCCACAGGTCTCAGCCAGCCTTATCCAACATGCATAT GCTAATGGTGTCATTGCAAACTTCACATTAGAATTCAAAGCAGTTCCACA AGGTGAAATCATGGTTTTACAAAACGCCATCGAAGATGTTGGTTACATCA ATGATATGCCTGTTCGACCCATCTCCTTGAGCAGTCCAGATGTCCCTGAC CAACCTGTCAATGTAACAGCCGTAGCCTTAAGTGCCACCAGAGTCCAATT GGATTGGTCGAAAGTGATTTATAACCATCCTTCGTACTACATTGTTGGAT ATACAGTGTTTTTCAAAGAGTTCGGTGATGACAATCCTTGGCTCAGTAAA ACAATCATGGTAAGATATATTTTGATTCTGCAGAAtcgaattttgttgaa aataacaAAGAGTTTAATCCAACAAAGTTTAAGATTTGGTTTAATACAca ctcttctcacagacccggtgggattttatcagccagtgggggtaaaaata acggaccaaaatttgattgggattgatattccatCGATTTTATAGTTTGG GATTGGAAtaccattgttttctagccagaaaattcaatggggatggaaaa aatagcacaatattttgcagttgggatttgcttatttgattattttcagc gtggacaaaaattagagtatagttttccactggggacgatattatggcca atttttccagtgggtctatgagaagggctTTTTTAAGAGCATTTCTAGTA TTATGCTCGAAAATAAAGACCTTAAATCGGAATATCACTGATCAAGCAAC CAGACTTGGAAGTTGGCCTTTACATATCGAGCGCAATCGTTCAAATATTT GTTTGATATATCCTTTAACAATTAGTTAGATTGTGAGCATCACATCTCAT ATCCTCCTTCACCAATAGGGTAATCAAACCACCTCACTGATCGTTGATTA TTTGAAACCATATACATTGTATACATCACGTGTCTTGGCTTTCCATGAAG CTGGTAATGGTATCTCCTCAAGTTATGTTGATTGCCAAACTCATGAAGGC TGTAAGTTGCTTCAAAGTTATTCGAACTTTCACCCATTAAATTCCATTAC TACATAGCGAAATTTAGAACACCATACATCACTCTataacttcaaatttt tgaatatttcttgaTTTCAAATACGCGTACACGTCGATTTCATTTGAGTG GGTTCAAAAAACAGGGCGAAATGGGGTGACGGTGCTCCTACTTCCATACC TACCAGCAGGAATGATTAAACAATTTCATATGGTGTCACTGGCACTTAAT AGGTGAATCATCTTTTAGTTTAAGGTAAAGTTCTTGTTCCGAATCTGATA GAGACCGCAGTCTTACAAAGGTCTTTCAACTTGAGAATATCTACTTAAAT TAACAACGTAATGGAAGTGGTGAAATGAATCAATGCAGGATCAGAGGTAG ACAGAGTATTACTTGTCCTTTAATCTTGGAACATAAAAATCTTAGTTTAT TCATGGCTCATCTAAGTTGATGACCgtgctggcacacaacgttgcttcga cgtttatctaacgttcacaacgtccatttaacgttagatgaacgttgaaa aaacgttgtgtgccagctggggaactttgagtttgaaaatcctTTGCCCT TTTCAGTGCCAACGGATGTACCACCACATTTCCAATGTAAACAAGAATCA GAAACGGAGATCGCATTGTCCTGGGATCATCTCGACCCAAACAAATGGAA CGGCTACATGAAAGGCTACCAATTAGAATTTGTCAAGTACAATACAGGAA CGAATTATACACGCATGACATTTACGTCAGGCATACGAGAGAATATTTTG GGTGGTCTTGAACCTTTCACCAAATATGAAATTTATATTCGAGCAATGAC CAATGCAGGACTTGGTCCCAGAGGATGGTGTGTACAAAGTACTCAAGAAG GAAGTAAGTGATTTTTATGTCTTTCCGCAAAAGTCTAAACGAGTTTGATT CTTTGATATAATTACAAATATTATAGTCATGAAGAATGAACCGAGACTAG TCGAAAAAACAAGACCGTTTTGACAAGTAATGTGATTTATAGTCAAGAGG TACGCAAATTTTAATCTTAAGGTAAGAGTTAGGGTAACTCCGCTCACAAA ATTCAAGTGGCATTCAAGTACAATCGTGTTTACCACTTTATCAACGAAAA ATCAATTATGTTTATTCCAGCACCAATCAGAGGCCCAGTCATCACACAAT GGTTACCAGACCCCGCACATCCAATGGAATCTGTGGTGAGATGGGATCAC ATCCCGGAAGAATATCTGAACGGAATTCTTACAGGATACTTGTTCACATA TGGTTACAGCAAAGTTGGTAAAGATGTCAGAGAATTTCCTGATATGACAA CAGTTCAGGTAGGAGGCAAATTCTGTTGAAAGAGTTCATCACAAGTCCGG GTGACATTCAATGTTATTTTATATCTACGTTAATTTAACGTTATATTTTT ACGTATGGTGTCAGATTAGGGAAAACAATTTGAGCGATTGGAAATTGACC ATTTCCTGCGAAAGAAACGAGGCAACCTGGCTCGAGTTATAGAGAGGATG ACTGCGTTTGCATCCTTCCAAACGATATGAGTTAAATCCGTTCATGGAGA AACCTAGGAATGAAAATATACTATCCTTCAAGTAAAGGTTTTCtaataaa aagttttataattcacttttttagcTTGACAAGTTCACCACCACGTACGT TTTGAGGAACCTACCTGTGTATACGGAaacgaaaattgaaatttatggGT TGACCAGTGTTGGGAGAGGAGTTGCAAGTACACCAGCTTTCGTCGGTGAG TATACTACTCgatatattatatattttctctttgattgATTTTCTCTTTA CGTGCACGGAATGAAAGGAATAATCGGGGTTGATAAATGGTGAAACGATT ACCTCTCGTAGAATAAAAATTGCTAAATCATCAGACTAAACACTCCTTGT GGATGTAAACCATTAAACTAAAGTGATACATATGATAATGAAGACAATGA ACTGATACTTTTTTCTTGCTCTCTCCTTTCTAGAAACATGTAGATGTCCA CAAAACATTTACAGTGCATGGTTCGAAAATAAACCTTACGTGTCCGAAAA TCCAGATGGATCAGTGTCCGGTATATGGCCAACGTATTTGAAGGGAATGT TGGACCAAATGTGTGGTAGTTGTGATTATTACAGCTCCAGTATTTACTGG GATCGAAGCAAATCTGGAcattctcccaagagaacaagtaagaaattttt tgttcatttattGAAACGTTACTGTCTAATAACAGTGTTTAGAAGAAGGT TTTTCGTCTGAGAAGGAAACGTTAACTTTGGGAaaaatgcagaattttga gacggaaaagccTTTGTTTAGACTTCGCTGAGTTGAAAATCCGTCTAAGA CGAAAGACCTTTTAAAACTGTAACAACAACGATACAACCAATAGGTTTTA CATTTGATAGTCACAAATATCCAAGGTAGATAACGTTGCCTTGAATCCGA CAATTATCAGAATATTGATCCACTTTCGCTTTTCCCTTAGGCGAGAACAA TTTGAAACAAATGGTAGCAGACAATGTTCACATGCATGTTGCAATGTTTG GGCGNCTTCCCTTTTCCACTAAGGCGAGAACAACTTGAAGCAGATGGTGG CAGACAATGTTCACATGCATGTTGCAATGTTTGGGCGCGCTGAAATcgaa acattccaatcagactTCAAGTATGTGTCAGTTATTGGTAGCCCTGGAAT CGCCTGGGTTGTGCGTGATCCTGAAGCGGAGCTAGACAAAACTGCAGCCA TTATGACGTCATTGGCAAGCTGTTGGCCTGCAATTATTATCATTGTTCTT TTCTCAATGGTGGCTGGAATTGTTATCTGGATTGCTGTAAGTTATATTGA CATGTATAATATGTTTCAATCAAATTAAGGTTTTCTGCTTTTCCTTATCT TTTGTGACTGAGCAAGGGGTGCTTTTTTAAACATAGTGCATGATGATTTA TGATTCTAATACATTTACAGCAATTGGAGAACTTTGCGAGGTACGATTTC TTACAAATGACAACATTTACTGAACAACAGTAGAATAACAGTAGAATAAC ACGTAGACTTGAATTGAACTTGTAAAAAACACCTCTTTCATCTTTCGCAG GATTGTCATGAAAACAAGGAAGACTTTCCAAACGAGAGTTTCATTCAAGG GCTTTACCATGGAACATACTGGGCTTTTGTCAGTATGACAACAGTTGGGT GAGTAACCAAtcaaaagtcttcttttttaaaggtGGTTTCAAAAGGTCTC CAAAAATTTTTATGGAGAGCAATAATAAAAAACACTCTCTGTTACTAATT TTGAGTACCTTCTATAACCACTGCTCTTTTCTTCCACCGCCATAttctca aaaacaaaatgaaaaagatatatttttcacgaattcatgatattcatgac gttaagttttctacggaaagaccccggtttttaccagtagtggcaaattt tacaCAAAcatttgtctagtttaaatttgccactacagGCTAAAACCAGG GCatttccatagaaaacattacgtcatgaatatcatgaatgagCCCCTCC TCTAGATTAGTTGGCTAATCAAGACATCGATATCTTTGCGTAAGAAAATG TCTAAAGTTACTACTATAATGTCTCTCAGATAATAAAGTCAGAGGCCGGT GCTATATGGCGAATTCTCATTTTTCATTGATGACTTGATTAATACACTAT GACAAAAAACGACGATGGTAGCATCATTCAAGATTACAGCCAACAAAAGA ATGCTAAATTTCAATTGACTTAGACCGGAGCCGTTTGTAATCCGTATAAT AAAGTGATGTGgttgttatatgataatacgataatgtATACGGGATAATG TCAATTTATCCcttccattattttttgcttttttctgcAACGTCTGACTT AAGTCGTCTAGCAAGATCTAGACTACCTCCTCACCAAACATATCATAATG AAACAAATTGAAAATCATTATGTGTAATCTCTTTAGTTATGGTGACAAGA CACCACGAAGTTTTGCTGCACAGATTGTGGCCATCTGTTGGATGTTAATG GGACCTATTATCAATGGTATCGTTATCGGAGCAATCACCACGTCTATGAC TTCAATCAACTTGGAAGGTGATCCGAAGATTTATGGAGCAAGAGTAGCTG CTATCCACCATTCGTTTGAGTACAATTTGGGTGTTCGAAGAAACGCTATT TTGAACCATACCAGTAAGGCTTATTCAGTTGACTCTCTATCTATTATTcg actgaaaatattcttcaaattagagaaagattcaaattgaAGAGATTGGG GGACCAATATTTGAAGTGATTTAAATGTGAATCTCAATCTTAATTAATAA CTCTCTGCTATATATTGAGATTCTTTTGATAGGAAAGATATAATATTCAT TACATTGAAGAAACAGCAACCGAGCTTGGTCTAAGCACAAGAACActtac taaagtctattcacgataagtgtgcactcttttttcatttacctataact tttgaaggaattcttcaatctttataaatttggtatcattggaaaggtAT Tagcgagtggaacaatttgaaataaaaaaatctttaaaaaaaatctaaaa atgaagatgaaaatgaagaagaaaaaaaggaagatcttgtagaaaaatgc tataactttcatttttactggagagattctttgatcttaggagatcatca ctgtgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNtgaccccaaaaaacagcaaaaaactgcagaa aacagcgtttttagacgtcaatcagcttataactttgtttgatatctttt gactgaacgattatttttgagaatttttttcacagtgatgacgttcgatg atcgaggattcacttcagtgaaaatgatagttatagcacttttctacaag atcttcctttttttcttcttcattttcatcctcatttttagaattttttt aaagatttttttatttcaaattgttccacttactaatatctttccaatga taccaaatttataaagattgaagaattccttcaaaagttataggtaaaag aaaaaacagtgcacacttatcgtgaatagactttaaaacgaattgatttt ttttcaaataaaatgtcGGCCGAAAACAAGGAAGGTTTTTTACTTTCCTT TCAAAGGAATaacgatttttgaaatatttctttttctttagattcGGATT ATCCAAGCGGAAAGATTTATACCGACAACGATCAGATGATTGGTGACCTT GCCGATCGATTCGTTGATGGTATCCTGATTGACTCATTGGTCGCTGCAGA TATGGCAGACAAGCTGACTGAGCGTAAACTAAAGATTGCTAAATTGATTC CAGAACCAGCAGGCTGGGGTATCATTTTGTCTGGTGATCTGTTGAGAATG GAGACTGAAATTCGATCATATGTCAAATTCAGTCAAGATTTGATCAAAAA TATGGTTGAAAATGCAACTGATGGGAAATTAGAGGTATGCATGAGAAAGA AATGTGAAAAGAATTCATCAAAACTCTGGAATATTGCCTGTGATCAGTTC ATTTTACGATTTCTGATGTTTGAGAATTTAGTTGTCGTTCGGCTACATGA GATAAAGACCAGGTTGCTTTTAAGAGATGGACAAAGTCTCACTATAATTT TGTATATCACAAAATTTACATGATTTTCCTCAATCTTACAGGTCAAGAAA GTGGAGACAGAGAAGGATACAGGGCTTATCGATCAAGACTCACCAGAATT TAAAaactttgtcaaatttggaTTGATCAGTTATGTGGTTCTGGCCATCC TTGGTGTCATCTGGGAACAAATCTTCAAACGCATTCAAAACTCTAAAATC AAACCTTTCAGTaagttttcttattttattcGAAAGATACATTAATACAC CTTGACTGCGCAGGTGGCTCCTGAGCGAACAAGCATTAAAGAAGGTAAGT TTAAGGCACAAAACGAAACAGCACCCATTCATCTCTCATTCAACCTTTGT ACACTCTCTTAGGCGAAGAACACCGTGAATTGTTGGAAGAAGATTTGGCA GAATCGGTGGGTGAATTTTGTGATGAGATATCAGAGATGATCAATACTAT GAGTGGTGATCATGAACGAGAATTGAAACGACTCTTCTGGAAGAAAGGTA AGAACACATACTCGAATCCAGTCCCTTAGTTTGTCTGTAAACAGACCCAA TATctaaggaaatttcaaaattaattttcgtACTATGCTACGTTATACGT GAGATATACATTCCGGTACAAAGTAACTACGAAACGAATTTCAAAGTCAA GTCTatcagtaaaattaaaaagtgatgCAATCAGTGGCCCTAGGTACGAG CATTGGTGTAAGCATGACCGTTTGCATGAAATATATTAATGAACGTTTAA TAAGTGCGTTCGTTAGCTTAGAATTTAGAGCTGAAATCTTGAGAGAAATT CAACCAAAAATCAATATTGATCATCAAAGTAAGATCTTCTCATGAGTAAA ATATAGAAAGTAAAAGATACTTTGAAGAGATTTCTAGACTATGCACCAAA CCATCTTTTCTTGAAAGAGAGTGCAAAGTGTGCTGGTTGATAAGACAGCG GGATCCACACTTTAAAACCGTGGTCACAGCAAAGTTTTCCATAGCAGACG GAAAATGGACTCAACAACATAAATCAGACAcgattttcaataatttgatg aattttgctgaattcTAAAACAGAAAAGCCTTTTTGAAGACGAAAGTCCG TTTGAGACGCTAGAGCTGTAAACCCCGTTTTAAAAAAGACGTCTTTAGAT AAGATAGCGGTGTCAATACTTTAAAAGAGATGTCTTTTTCCTTTGTTCAG GTTATTCATTCGGTGTGGACGGATGGCTTCGTGAAAAGACAAACAACGAA GAAGAACTGAAGAATAAAATCCGTTATCACGAAATCATGTCCAAAGATCT tggattctttgaaaaatggaaGAAAGGAAAACAATCAGCAATGTCCGCTA TCGGTATCGGACCTATCCGTGTTTCCCCTGCACCGCAACCAAGCTCGAAA ACTACCTCGCAACAAACGTTAAAAGAGCACACTGCAGAACAAGAAACTAT GGCATAAACGAGTTAAACATTGCTATCAACATTATTTTTAACAGCAAAAT GACATTTGACGTGTTGATAATGATTGATAATGATAATGGTTGAAGAGTTG ATtaaaagaatatcaaattcgTAAGCTGCGGTTTCGTTCCGATTTGAAAT CGGAAATGAAGCAACTCTACTGGACAATCCGGTCAACAAAGAGAACGGCG AAAGAAGAAAGTACCGCTCAAGAAGTGTTCAAGTTCTAAAAAGAATCATT TATATTAAATAAActatcaatttatattttttgcacGATAAAATAAATAC ATTGACTACCTTATCAGACCTTTTTACGTAGGCTCTTATTGGCGTTAATA TTTAGTTGCTGGCGTAAGGAATCGGAATCAAAAGTGGAAAGTAAGCTTTA GTGCAATAAGGACCGTCGTAAAAGCGGCCGCCGGTCGTAGAAGGGCCGAT TAGGTAAATGACCAAATGTAGtaaatgttgcttttaatttcTCCCTAAAA TTTTCTTATCGATTTAATTAATCGTATTGTTATGCATAGAATGAGAAGAT ATAggtttcaaaaacttgatttgtAAATAGCTGTTTTatgagtaaaattt ttaactttcaaaaaatgaaatgtgTATGTAATATTAGTTTAAAAAGAGCA CAAGTTATTGAATTTGTATgcaaatatttttagttttcttgtAGAAGAAA TAGATACAGTGGACTTTTGCTGATTCGAACTTCAAAGGTTAAATTTAATT CAACCGCAAacagattcgaattatagaaaatatttaattaaGGTTTCGCC TTTTTAACTGGGGATTTGTTCAAAAAAAAGTTCGAATCGGCGAAATTCCA CTGAATTGTGATATCAACTAAAGCTTACTTGAttaatt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020975TCONS_00020975Clytia hemisphaericatranscript
TCONS_00020976TCONS_00020976Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020975-proteinTCONS_00020975-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000376supercontigsc0000376:36725..46512 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.04 0.01 0.02 0.15 0.1 6.48 6.84 16.12 12.37 15.63 20.92 34.92 33.74 4.59 3.42 6.06 7.57 78.11 75.62 34.78 32.66 7.8 16.62 24.99 39.35 6.52 4.75 0.21 0.17